vgll1


Basic Information

Item Value
gene id vgll1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24473175 ~ 24476728 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812764.1
TGTAACTTTGGAGGCTCAGTGAGCAAAATATTTTGTCCGTAGAGGATAGGAAAGTTGATGACATTGATTGACATTTTTCCAACAATTTCGGCTGCTGCTCATGTTAGTGAACACATAAGCGTTGATCAACTAATGCAAGGACACACTCCCTGGTTATCTTCGGTCATTCATTAGGCCAGCTGACCCATGGAGGACAGAACAGACAGTCCCACAGCTGTGAAGGTGGAGGAGCATTCTCGTTGTTTCATCCTGACTTACTTTCATGGGGACATCAACAGCATGGTGGATGCTCACTTCACCCGTGCTCTCAGCAAAGTCTGTAAAGCCAAGGCACCGGcagcaaagacaaagacaattCGTAAAACTATTAAATTGGAGGATACCAGCCACCATCAGAGGAGTGCTCCTGACTGTTACTCAGAGTCACAGGTCCCTCCTGCAGCAGGACGTCTCCTTAACTTCAGCCCTGCAGACAACGCTCCTGGCTCCTGGAACTCGTTCACAACCAGGGCAGGAGAGGGCCTGGGGTTGCCGTCCATTACCTACTCTCTGTCCCCAGAAGGGTTGAATCTTACGGGACAGCAGTACACCACATCCCTGCTCAACCTGCTGGATAGTGACCGGGTTGAGATGGGACCCAGCATGGCCTCCAGCTCCAAGCCAATACTGCATTCCAGCTGGACGGTGCCTCAAGGATATAGAGACTCCGTGGACCCTGCTGTAGGCTTTGAACCTGGACGGCATCTGGACAAGAAGGACTTGTACTGGTATTGAAGAGAGAGTGGCTGGAGCAGCAGAGACATGGAACAGCTTCAACTACACCACATACGCCCGGCTTTCTGTTCAGATCTCAGATAATCTTTTGTCAAACAGGCCTCACTGAAAGTCATATACACAGAAGAAACGCTGCAGCACTTCCTGTTTCAGTGAAATGACCTCAGTACATCAGCATGTACTAACTGCAACAACTATTTTGGAAGGGAACACTCTTTGACAAACCTGTTCTTCAactctgtcgctcctctcaaaGATTTCAAAGCACTGTATATGTTGGATGAAGGgcattttcttgtgtttttatcAGGCACTTCACTTAGTGGGCCTGCACCAGTAAATAGACCAGCATTACTGTAAGTCAAAGTGTGAACATTTGTGAGTGTATAAATATTGATGCAAATATCTATCTAGTTTACCCTATATAAGCTTGTGTTGCTTTGAGAATATTTcatatgtaaaaacaaaacaaaattaaggATTGTGATATTACGTTAATGACTTATTTCTGTAATCTTAAACTTTTGTGGAATGCACTGTACAAAATTGGAATCATAACTTAAATAAATATctgaacagacaa

Function

NR:

description
PREDICTED: transcription cofactor vestigial-like protein 1 isoform X1

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812764.1 True 1357 mRNA 0.45 4 24473175 24476728

Neighbor

gene id symbol gene type direction distance location
tmtops3a LOC103376588,LOC104957983,LOC101471053,LOC102197526,LOC102311316 coding downstream 7664 24459097 ~ 24465511 (-)
cd40lg NA coding downstream 15966 24454805 ~ 24457209 (-)
LOC120566938 tm9sf2 coding downstream 54864 24408676 ~ 24418311 (-)
zic6 LOC104917996,LOC104957987,LOC103376516,LOC101465244,LOC102782580,LOC102312981 coding downstream 142415 24322057 ~ 24330760 (-)
f9a NA coding downstream 381945 24083304 ~ 24091230 (-)
adgrg4a NA coding upstream 837 24477565 ~ 24490143 (-)
fhl1a fhl1 coding upstream 50936 24527664 ~ 24541162 (-)
slc9a6a slc9a6 coding upstream 67282 24544010 ~ 24558121 (-)
drp2 drp2,LOC107724836 coding upstream 106235 24582963 ~ 24789913 (-)
cenpi cenpi coding upstream 314655 24791383 ~ 24805738 (-)
G107759 NA non-coding downstream 3988 24468949 ~ 24469187 (-)
G107742 NA non-coding downstream 19041 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding downstream 22406 24448121 ~ 24450769 (-)
LOC120566461 NA non-coding downstream 91863 24288149 ~ 24381312 (-)
G107667 NA non-coding downstream 213829 24199499 ~ 24259346 (-)
G107764 map7d3 non-coding upstream 20608 24497336 ~ 24514238 (-)
G107765 NA non-coding upstream 46395 24523123 ~ 24524589 (-)
G107772 NA non-coding upstream 66652 24543380 ~ 24543713 (-)
G107855 taf7l,taf7 non-coding upstream 84475 24561203 ~ 24563631 (-)
G107874 xkrx,LOC102776626 non-coding upstream 347353 24824081 ~ 24835348 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 484274 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 1286117 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 1296149 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 1338390 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 1479946 22990987 ~ 22993229 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 96713 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 385242 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 786444 25263172 ~ 25264864 (-)
G107989 NA other upstream 802875 25279603 ~ 25288086 (-)
diaph2 NA other upstream 1360602 25837330 ~ 26258199 (-)

Expression


Co-expression Network