zdhhc2 (zdhhc2)


Basic Information

Item Value
gene id zdhhc2
gene name zdhhc2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 2775405 ~ 2793673 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812822.1
GCTGTCTGATATTGTGTTGTAGTCTGTACCAGTGTCTGAACAGGACGATCAGAGGGGAGCAGTGCAGCGGCATCAGAGGCGGGCGGGAGGCTGGTAGAATATGTTGCGTCTGAGCTGTCCATTAAGGCAGATCAGAGCCGGAGCACCGATGCAGTGACAGTCTACAGGAAGACACTGGcacacatatttacacacacagtgagggagagggaaggagagtaAACACACGAatgcgcacgagaaatgatccgtTCCTAGACTATGGCACCGTCGGGCTCGCGTAGTATCAAGAAGGGCTGTCAGAGAGTTTTGTACTGGATCCCGGTCCTCTTCATCGCCCTCATAGTGGCGTGGTCATACTACGCCTATGTGTTGCAGCTTTGCATAGagTCTATCGAGGACACAGGAGAAAAGGTTATATACTTGCTTGTGTACCATGTCATCTTCATCATGTTTGTGTGGGCTTACTGGCAAACCATCTTCACCAGGCCCATGAACCCCCTGAAGGAGTTTCACCTGTCCTACTCTGACAAAGAGCTGCTGGAGCGTGAAGATCGGGGGGAGTCTCAGCAGGAGATCCTGAGGAGGATAGCCAAGGATCTGCCCATCTACACCCGCACCAATTCTGGAGCAATCCGTTTCTGTGACCGCTGCCAGCTGCTGAAGCCTGATCGATGTCACCATTGTTCAGTCTGTGATAAATGCATCCTGAAGATGGATCACCACTGCCCATGGGTGAACAACTGTGTGGGATTCTCCAACTACAAGTTTTTCATGCTGTTCTTGGCATATTCGCTACTCTACTGCCTTTTTATAACTGCTACAGATCTTCAGTACTTCATTAAGTTTTGGACGGCTGGAGGTAGAGCACATTTCCGTCTGAGAGAATATCTGAACAGCCTCCCAGACACTCAGGCCAAGTTCCACATCCTGTTCCTCTTCTTCTCGGCCTCCATGTTCTCAGTCAGCCTGGCTTCGCTTTTCATCTATCACTGCTGGCTCGTCTGCAAAAACAGATCCACCCTGGAGGCTGTGCGTTCTCCAGTGTTTCGCCACGGCATCGATAAGAACGGTTTCAGTCTGGGCTGCAGTAAGAACTTCCGCCAGGTCTTTGGGGATGAACTTAAATACTGGCCGATTCCTGTTTTCTCCGGTTTAGGCGACGGTTGCTCGTTCCCAACCTGTCTGGTGAATCTGGACCCAGAGCAGCCCTCATCCCCCAGGGGCTCCAACCCTGCCAGCAAGGGTGCAGCAGAGGGCCGCCAGTTCCCCTCCAAGCCGCTGAGGGAGTCTCAGAGTCGACTGCTCACCAGCACCCCCTCCTGGACAGAGAGTGACAGTGCAACAGACAAAGACAGGAAGGGTGCCAGTAACCTAGGGATGACCATAGAAAATGAGGCATAACCTGAGTTAGAGATAGAGGTGACACCTTCAACCCAGAAAAGTCTATGCCGCCCCCTCCTCGGTGTTGTGCCTATCGGAACGTGACGTGGCGGTGACATCATCATTTGTTGTTTTCTACACTTCAGCCTGCTTCTGAGAGGTTTACATGACTGACTCCTACAAAGTGGAGACAAATTAATTATCATCAGAATTACTCTTATTGCTATCGGCAACAATTTCTGCTGCTATCTGAAACTCTTTGGGCTTCGGAACAACTTAAAATAGCATTCCAAccttcacattttcttttgtttgtatatGAATAAGAAGAGAGCAGTAATGGAAGAGATGTTTTTGCACTTTGTAAACGAGGAAGTCAATCTGAGCTGCTTTTGTATGTTACAGTTCATGTAACAGAAACTCAGAATTATCTACAAGTTTGTTTTATGGTATTTATGTAGCTTAGCACATAGGTAGATGCTGTTATAAGTTTGCACTTGAAGTATAAAGTATTAGGTGTTAATGTGATGTGATATTCCTTTAGCCATTTTGTTCCTTCAGTGAAGGTTTtttggagggagggagggggagttGTTGGGAAAGTTGTTGAAAGTTGATTTGATGCATGCTCTCATCTCAGGatgtcaacacaaacacaccttgcTGTAGTGAATTTTACCACAACAATTTTACCTTTGCTTGACAAAAAAGTGTAGTCATTAGTAATTACATTTGAATAAGGGCTCTTCTGACTCGTTATAGCATGAGTGAGGATGTTGCCGTCATACTAAAAAACCTGAAAGCTGGTGCTGCTCCGTGCTACGTGTCCCCTCTGCCAAATATCAACAGAGACTGGCAGCCTACAGTACACGTCAAACTGCCGGCCAAAAGCTTCCGGACTGTCTCTGTGTAACGCTGCAGATCTGTTCGCCATCAAAAAGCAGATACTGTTGAGTTGTTTTTCTAACTCACAACATGTTGTGGATCTATTGCAGAGCAAAAAAAAACCAGAGATTCCAGCTCCAGCTGctttgtacagtatattttcaTCTTCTGAGGATTCTGGCTGGAAATCAAACCATTGAAAATGAGTTGGTAGAATGTCTgctcgtttaaaaaaaaaaaaaaaaaaaagcttcattGTGACAGTCGGTGTCAATCTATATTTTTCTATTCTTCGGTCTGTATGACTCGAGACAACATGGATGTGTGAGGCAATGTACTGTACAGTTGTAATGCCTTATAAGAATAAAATAAGCTCATCTTCA
>XM_039812823.1
GCTGTCTGATATTGTGTTGTAGTCTGTACCAGTGTCTGAACAGGACGATCAGAGGGGAGCAGTGCAGCGGCATCAGAGGCGGGCGGGAGGCTGGTAGAATATGTTGCGTCTGAGCTGTCCATTAAGGCAGATCAGAGCCGGAGCACCGATGCAGTGACAGTCTACAGGAAGACACTGGcacacatatttacacacacagtgagggagagggaaggagagtaAACACACGAatgcgcacgagaaatgatccgtTCCTAGACTATGGCACCGTCGGGCTCGCGTAGTATCAAGAAGGGCTGTCAGAGAGTTTTGTACTGGATCCCGGTCCTCTTCATCGCCCTCATAGTGGCGTGGTCATACTACGCCTATGTGTTGCAGCTTTGCATAGagTCTATCGAGGACACAGGAGAAAAGGTTATATACTTGCTTGTGTACCATGTCATCTTCATCATGTTTGTGTGGGCTTACTGGCAAACCATCTTCACCAGGCCCATGAACCCCCTGAAGGAGTTTCACCTGTCCTACTCTGACAAAGAGCTGCTGGAGCGTGAAGATCGGGGGGAGTCTCAGCAGGAGATCCTGAGGAGGATAGCCAAGGATCTGCCCATCTACACCCGCACCAATTCTGGAGCAATCCGTTTCTGTGACCGCTGCCAGCTGCTGAAGCCTGATCGATGTCACCATTGTTCAGTCTGTGATAAATGCATCCTGAAGATGGATCACCACTGCCCATGGGTGAACAACTGTGTGGGATTCTCCAACTACAAGTTTTTCATGCTGTTCTTGGCATATTCGCTACTCTACTGCCTTTTTATAACTGCTACAGATCTTCAGTACTTCATTAAGTTTTGGACGAACAGCCTCCCAGACACTCAGGCCAAGTTCCACATCCTGTTCCTCTTCTTCTCGGCCTCCATGTTCTCAGTCAGCCTGGCTTCGCTTTTCATCTATCACTGCTGGCTCGTCTGCAAAAACAGATCCACCCTGGAGGCTGTGCGTTCTCCAGTGTTTCGCCACGGCATCGATAAGAACGGTTTCAGTCTGGGCTGCAGTAAGAACTTCCGCCAGGTCTTTGGGGATGAACTTAAATACTGGCCGATTCCTGTTTTCTCCGGTTTAGGCGACGGTTGCTCGTTCCCAACCTGTCTGGTGAATCTGGACCCAGAGCAGCCCTCATCCCCCAGGGGCTCCAACCCTGCCAGCAAGGGTGCAGCAGAGGGCCGCCAGTTCCCCTCCAAGCCGCTGAGGGAGTCTCAGAGTCGACTGCTCACCAGCACCCCCTCCTGGACAGAGAGTGACAGTGCAACAGACAAAGACAGGAAGGGTGCCAGTAACCTAGGGATGACCATAGAAAATGAGGCATAACCTGAGTTAGAGATAGAGGTGACACCTTCAACCCAGAAAAGTCTATGCCGCCCCCTCCTCGGTGTTGTGCCTATCGGAACGTGACGTGGCGGTGACATCATCATTTGTTGTTTTCTACACTTCAGCCTGCTTCTGAGAGGTTTACATGACTGACTCCTACAAAGTGGAGACAAATTAATTATCATCAGAATTACTCTTATTGCTATCGGCAACAATTTCTGCTGCTATCTGAAACTCTTTGGGCTTCGGAACAACTTAAAATAGCATTCCAAccttcacattttcttttgtttgtatatGAATAAGAAGAGAGCAGTAATGGAAGAGATGTTTTTGCACTTTGTAAACGAGGAAGTCAATCTGAGCTGCTTTTGTATGTTACAGTTCATGTAACAGAAACTCAGAATTATCTACAAGTTTGTTTTATGGTATTTATGTAGCTTAGCACATAGGTAGATGCTGTTATAAGTTTGCACTTGAAGTATAAAGTATTAGGTGTTAATGTGATGTGATATTCCTTTAGCCATTTTGTTCCTTCAGTGAAGGTTTtttggagggagggagggggagttGTTGGGAAAGTTGTTGAAAGTTGATTTGATGCATGCTCTCATCTCAGGatgtcaacacaaacacaccttgcTGTAGTGAATTTTACCACAACAATTTTACCTTTGCTTGACAAAAAAGTGTAGTCATTAGTAATTACATTTGAATAAGGGCTCTTCTGACTCGTTATAGCATGAGTGAGGATGTTGCCGTCATACTAAAAAACCTGAAAGCTGGTGCTGCTCCGTGCTACGTGTCCCCTCTGCCAAATATCAACAGAGACTGGCAGCCTACAGTACACGTCAAACTGCCGGCCAAAAGCTTCCGGACTGTCTCTGTGTAACGCTGCAGATCTGTTCGCCATCAAAAAGCAGATACTGTTGAGTTGTTTTTCTAACTCACAACATGTTGTGGATCTATTGCAGAGCAAAAAAAAACCAGAGATTCCAGCTCCAGCTGctttgtacagtatattttcaTCTTCTGAGGATTCTGGCTGGAAATCAAACCATTGAAAATGAGTTGGTAGAATGTCTgctcgtttaaaaaaaaaaaaaaaaaaaagcttcattGTGACAGTCGGTGTCAATCTATATTTTTCTATTCTTCGGTCTGTATGACTCGAGACAACATGGATGTGTGAGGCAATGTACTGTACAGTTGTAATGCCTTATAAGAATAAAATAAGCTCATCTTCA

Function

symbol description
zdhhc2 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation; protein targeting to membrane; and synaptic vesicle maturation. Predicted to be located in several cellular components, including endoplasmic reticulum membrane; postsynaptic density; and postsynaptic recycling endosome. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC2 (zinc finger DHHC-type palmitoyltransferase 2).

NR:

description
PREDICTED: palmitoyltransferase ZDHHC2 isoform X3

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K20028 ZDHHC2_15_20; palmitoyltransferase ZDHHC2/15/20

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812822.1 True 2651 mRNA 0.46 14 2775405 2793673
XM_039812823.1 False 2612 mRNA 0.46 13 2775405 2793673

Neighbor

gene id symbol gene type direction distance location
pdgfrl pdgfrl,LOC100690066,LOC101468828 coding downstream 55378 2714174 ~ 2720027 (-)
polr1d polr1d,LOC104920592,LOC104965767,LOC103366847 coding downstream 102202 2664227 ~ 2673203 (-)
LOC120566298 NA coding downstream 184786 2587617 ~ 2590619 (-)
lpar4 lpar4 coding downstream 200116 2567904 ~ 2575289 (-)
p2ry10 NA coding downstream 210225 2558237 ~ 2565180 (-)
micu3b micu3,LOC104941480,LOC104920617 coding upstream 2576 2796249 ~ 2816202 (-)
her11 NA coding upstream 49414 2843087 ~ 2844699 (-)
pfdn6 pfdn6 coding upstream 61157 2854830 ~ 2859046 (-)
ints6l LOC103357573,LOC100710804,LOC102788097,LOC101475885 coding upstream 72166 2865839 ~ 2884095 (-)
hprt1 hprt1,LOC102225914,LOC107082363 coding upstream 105678 2899351 ~ 2909040 (-)
G102923 mtus1 non-coding downstream 63966 2709027 ~ 2711439 (-)
G102916 NA non-coding downstream 80791 2694352 ~ 2694614 (-)
G102915 NA non-coding downstream 81850 2690831 ~ 2693555 (-)
G102914 NA non-coding downstream 84842 2688009 ~ 2690563 (-)
G102913 NA non-coding downstream 88325 2686864 ~ 2687080 (-)
G103059 NA non-coding upstream 145473 2939146 ~ 2940797 (-)
G103067 NA non-coding upstream 166698 2960371 ~ 2961386 (-)
G103096 LOC106586057 non-coding upstream 328006 3121679 ~ 3125337 (-)
G103097 NA non-coding upstream 338478 3132151 ~ 3191381 (-)
G103085 NA non-coding upstream 373979 3167652 ~ 3246583 (-)
slc7a2 slc7a2,LOC102301583 other downstream 34918 2725460 ~ 2740487 (-)
sh2d1aa sh2d1a,LOC102800107 other downstream 577487 2176867 ~ 2197918 (-)
insb LOC101469513,LOC102789752 other downstream 1933787 838946 ~ 841618 (-)
tmsb2 NA other downstream 2306955 466290 ~ 468450 (-)
G102276 NA other downstream 2543961 220592 ~ 231444 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 97297 2890970 ~ 2898545 (-)
LOC120567496 NA other upstream 102498 2896171 ~ 2896313 (-)
guf1 guf1,LOC102797887 other upstream 830486 3624159 ~ 3642640 (-)
G103268 NA other upstream 1109318 3902991 ~ 3925309 (-)
smim19 smim19 other upstream 1135257 3928930 ~ 3933220 (-)

Expression


Co-expression Network