gdpd2


Basic Information

Item Value
gene id gdpd2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23858022 ~ 23868756 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812859.1
ATTCAGTTCACGGAAAGGATGCGAGAGAAGTAGAGTGGAGGCAATCAGAGTGGTTTTCCCACGGAGTGTGCTACGGAGGAATTTAACACCACAGTGGGATTCATGGTATAGAGAGGTAAAGGAGGTCGGGCTTCTCCTGGTATCCAGAGAAAGAATTATCTGGGCTCCATCCAACCTTCTTCAGGCCGTCCTGTATCAGGTGTTCAGATTATACTGAGCAGGATCTGCACTTCCTAAACTGTGAATGAGGAGGAGAAGTCATGTCTCCAGACAAGAGCTGTTGCAGAGTTTGCAGCAGGGGCTTATATAGCTGCCACTGGAAGCATGCAAgtaaaactgaaagaaaaCGTGCATGCTGTTGGTTCTCAGTTGTCATTATGGTCTGCCTGCTTTCCCTGTGCTGGATGTATTTCTGTCTGGTTACTTTTAATGACCGAGAGGATGTTAACTGGGAGGGCTTCAAAACACTGAAACGATGGGTGAACTGGTTCATGGTGCTGATCATCATTTCTGCAGTGGTAACCAGCTACTGCGTTCTGCTGCTGCTCTTTGCACTCTTCCAAGTTGCCTTAGAAGAACCACTCAACTTACACTGGCTACACAAGATCCTCCTATTTTTTGGTGTGATGTTCATCACTTTAGGGGTCATAGGAATCTGTCTCAAGTGGAAAGATGAATTGCCAACTGTTCCTCTTTCACTCCAGGCCACAGCTCCTTTCTTGCAGTTTGGTGCTGTTGGGGCGTTGACCCTGCTGTGCTCGTTCGTCTTCCAGGGCTTCCACACTGCCAGGAAACAATgGTCTAAGTTCCTGATTGCAGTGATATTTGTAGTGGTGTCAGCAGCCATCTTCCTGTGTCCCCTGAAGATCGAGTCTCCTTGTCTGATAGAGAAGCATGAATTACCTGATAAACCAAAGCTTATTGGTCACCGAGGCGCACCAATGCTGGCCCCAGAGAACACCATGATGTCGTTCAACAGGAGCATCGCGTGCGGCGTGACAGCCTTTGAGACAGACGTACAACTCAGTAAAGACAGAATTCCCTTCTTGATGCATGACCATAGTACTTCGTTCTTACGGAGAACAACAAACGTTATTGAGAAGTTCCCTGGCAAAGACTTCAGCCACAGCTCCAACCTCACCTGGGAGGAATTACAGAGTCTgaatgcaggtgaatggttcctaaAGACAGATCCTTTCTCTTCAGTGTCCAAGCTCTCAGAAGAGGAGATGGAAACAGCCAGGAATCAGACTATTCCCTCTTTATTTCAGCTCCTCAACCTTGCCAAGCAGCACAACATCTCAGTGATATTTGACCTATATAGTCCCAACCAGAAAGATGACACAGAGGACACAGTCAACACCACCTTGAGTTCTGGCATTGACCCAAGCCTGGTTCTCTGGCTTCCTCCAGCAGaaagaaaatatgtaaaaaagaCTGCTCCAGGCTTCATTCAGGTCTATAACAACGCAAATGATATGGAAGGGGGGAACCACCTAAATGTGAAATACAGCAACTTAAGTGTGAAAGAAATCAGGGAACTTCGGAGCAGGAATGTTACGGTGAACCTGTGGGTGGTTAATGAGCGTTGGCTCTTTTCTCTGCTGTGGTGTGCAGGGGCCAGCTCTGTTACCACCAACTCCTGCCACCTCCTAAAAGACATGCACCATCCTGACTGGTTGATGCCGCCTCttacatacaaaataatatgGATTACATTGGACATTGTATCTATTCTGATAATGACTGGACTCTACATCTTTCAGTGGAAATCACACCGTTTCTGTCGCAGAGAAGGGACAGAGAGGCAAAGAAACGATACTTTAGCCTGGACTGAGAAAGAATTGTCTCCCTTCTTACCCACCGGGTAGCTCGCCCGACTCCGGCAGTAGATTTTTCTGCCCCGAAAATGACGTACATTCTTGTCCGCATTGCCAGAATGGTTTGGACCTAAATCAGGAAGAAAGCAAGCTAATGTGAATAACCACGGTATTCCGAAGCCATGAAAATAAGAATGTTGTTTCAGAGGTTATACTGTATGGTAACCAAATATTGGCACTATGCCACTGGATTGTggttttacttttttgtttctttctaaaTATAGCTGGTTAACTGGGTTTTTGATCATTCTTCTGTTACTGAAAATATGAAACTTTTCTTTGATAGTATCACTGCAATGTGCACTGTAGGTCTGCACTGGATTTCCTCTTGgcactttattgtgtttttttctgatgttgcttttctgcttttctgttaaaaaactttttttcatgttgtcaCCACTGCAGGAGAGATTTGTATGTACTGTAACCTGAGCCAAAAGCATTACAACTATTTTCTACACTGTC
>XM_039812860.1
ATTCAGTTCACGGAAAGGATGCGAGAGAAGTAGAGTGGAGGCAATCAGAGTGGTTTTCCCACGGAGTGTGCTACGGAGGAATTTAACACCACAGTGGGATTCATGGTATAGAGAGGTAAAGGAGGTCGGGCTTCTCCTGGTATCCAGAGAAAGAATTATCTGGGCTCCATCCAACCTTCTTCAGGCCGTCCTGTATCAGGTGTTCAGATTATACTGAGCAGGATCTGCACTTCCTAAACTGTGAATGAGGAGGAGAAGTCATGTCTCCAGACAAGAGCTGTTGCAGAGTTTGCAGCAGGGGCTTATATAGCTGCCACTGGAAGCATGCAAgtaaaactgaaagaaaaCGTGCATGCTGTTGGTTCTCAGTTGTCATTATGGTCTGCCTGCTTTCCCTGTGCTGGATGTATTTCTGTCTGGTTACTTTTAATGACCGAGAGGATGTTAACTGGGAGGGCTTCAAAACACTGAAACGATGGGTGAACTGGTTCATGGTGCTGATCATCATTTCTGCAGTGGTAACCAGCTACTGCGTTCTGCTGCTGCTCTTTGCACTCTTCCAAGTTGCCTTAGAAGAACCACTCAACTTACACTGGCTACACAAGATCCTCCTATTTTTTGGTGTGATGTTCATCACTTTAGGGGTCATAGGAATCTGTCTCAAGTGGAAAGATGAATTGCCAACTGTTCCTCTTTCACTCCAGGCCACAGCTCCTTTCTTGCAGTTTGGTGCTGTTGGGGCGTTGACCCTGCTGTGCTCGTTCGTCTTCCAGGGCTTCCACACTGCCAGGAAACAATgGTCTAAGTTCCTGATTGCAGTGATATTTGTAGTGGTGTCAGCAGCCATCTTCCTGTGTCCCCTGAAGATCGAGTCTCCTTGTCTGATAGAGAAGCATGAATTACCTGATAAACCAAAGCTTATTGGTCACCGAGGCGCACCAATGCTGGCCCCAGAGAACACCATGATGTCGTTCAACAGGAGCATCGCGTGCGGCGTGACAGCCTTTGAGACAGACGTACAACTCAGTAAAGACAGAATTCCCTTCTTGATGCATGACCATAGTACTTCGTTCTTACGGAGAACAACAAACGTTATTGAGAAGTTCCCTGGCAAAGACTTCAGCCACAGCTCCAACCTCACCTGGGAGGAATTACAGAGTCTgaatgcaggtgaatggttcctaaAGCTCCTCAACCTTGCCAAGCAGCACAACATCTCAGTGATATTTGACCTATATAGTCCCAACCAGAAAGATGACACAGAGGACACAGTCAACACCACCTTGAGTTCTGGCATTGACCCAAGCCTGGTTCTCTGGCTTCCTCCAGCAGaaagaaaatatgtaaaaaagaCTGCTCCAGGCTTCATTCAGGTCTATAACAACGCAAATGATATGGAAGGGGGGAACCACCTAAATGTGAAATACAGCAACTTAAGTGTGAAAGAAATCAGGGAACTTCGGAGCAGGAATGTTACGGTGAACCTGTGGGTGGTTAATGAGCGTTGGCTCTTTTCTCTGCTGTGGTGTGCAGGGGCCAGCTCTGTTACCACCAACTCCTGCCACCTCCTAAAAGACATGCACCATCCTGACTGGTTGATGCCGCCTCttacatacaaaataatatgGATTACATTGGACATTGTATCTATTCTGATAATGACTGGACTCTACATCTTTCAGTGGAAATCACACCGTTTCTGTCGCAGAGAAGGGACAGAGAGGCAAAGAAACGATACTTTAGCCTGGACTGAGAAAGAATTGTCTCCCTTCTTACCCACCGGGTAGCTCGCCCGACTCCGGCAGTAGATTTTTCTGCCCCGAAAATGACGTACATTCTTGTCCGCATTGCCAGAATGGTTTGGACCTAAATCAGGAAGAAAGCAAGCTAATGTGAATAACCACGGTATTCCGAAGCCATGAAAATAAGAATGTTGTTTCAGAGGTTATACTGTATGGTAACCAAATATTGGCACTATGCCACTGGATTGTggttttacttttttgtttctttctaaaTATAGCTGGTTAACTGGGTTTTTGATCATTCTTCTGTTACTGAAAATATGAAACTTTTCTTTGATAGTATCACTGCAATGTGCACTGTAGGTCTGCACTGGATTTCCTCTTGgcactttattgtgtttttttctgatgttgcttttctgcttttctgttaaaaaactttttttcatgttgtcaCCACTGCAGGAGAGATTTGTATGTACTGTAACCTGAGCCAAAAGCATTACAACTATTTTCTACACTGTC

Function

NR:

description
PREDICTED: glycerophosphoinositol inositolphosphodiesterase GDPD2

GO: NA

KEGG:

id description
K01124 GDPD2; glycerophosphoinositol inositolphosphodiesterase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812859.1 True 2354 mRNA 0.45 16 23858022 23868756
XM_039812860.1 False 2270 mRNA 0.45 16 23858022 23868756

Neighbor

gene id symbol gene type direction distance location
dlg3 dlg3,LOC106611741,LOC102786504 coding downstream 1731 23770291 ~ 23856291 (-)
kdrl LOC103373800 coding downstream 100871 23710021 ~ 23757151 (-)
cdx4 cdx4 coding downstream 160532 23694270 ~ 23697490 (-)
chic1 LOC102788766,LOC101478093,LOC108231262,LOC104958396 coding downstream 165213 23686594 ~ 23692809 (-)
slc25a43 slc25a43,LOC102789340 coding downstream 206300 23646135 ~ 23651722 (-)
stard14 NA coding upstream 10305 23879061 ~ 23883457 (-)
arr3b NA coding upstream 25839 23894595 ~ 23900300 (-)
f9a NA coding upstream 214548 24083304 ~ 24091230 (-)
zic6 LOC104917996,LOC104957987,LOC103376516,LOC101465244,LOC102782580,LOC102312981 coding upstream 453301 24322057 ~ 24330760 (-)
LOC120566938 tm9sf2 coding upstream 539920 24408676 ~ 24418311 (-)
G107610 NA non-coding downstream 65520 23792054 ~ 23792502 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding downstream 594123 23242037 ~ 23263899 (-)
G107282 NA non-coding downstream 633566 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding downstream 676305 23179692 ~ 23181717 (-)
G107220 NA non-coding downstream 884262 22928854 ~ 22973760 (-)
G107667 NA non-coding upstream 330743 24199499 ~ 24259346 (-)
LOC120566461 NA non-coding upstream 419393 24288149 ~ 24381312 (-)
G107742 NA non-coding upstream 563245 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding upstream 579365 24448121 ~ 24450769 (-)
G107759 NA non-coding upstream 600193 24468949 ~ 24469187 (-)
rnaseh2c rnaseh2c other downstream 670964 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 680996 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 723237 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 864793 22990987 ~ 22993229 (-)
G107117 NA other downstream 1165191 22691160 ~ 22692831 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 15832 23884588 ~ 23988901 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 704685 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 993214 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 1394416 25263172 ~ 25264864 (-)
G107989 NA other upstream 1410847 25279603 ~ 25288086 (-)

Expression


Co-expression Network