macrod1


Basic Information

Item Value
gene id macrod1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23051417 ~ 23155345 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812864.1
TTCCacaacaaaaatggcacatGAGAACTAACCTAACCGACGTGTATCATCACTCAGTGTTCGTACCGAAAACGAAACCTAACCACACGGTGTGGCTGACACTGATCCCCGTGAAGCTGTAGTAACACGAACCGTTAGCCCCCTCGGCGTCACTCAGCATGGCACTGCAAATATCAGCTCTATTTTCATATATCAGAGCCCCACTGTGCACTGGCCCTCTGTCCCGTGTCCGCGCTGACTTCCAGGGAGCCGGTGTCAAGTTCAAACACATCTTAACTCCTGGAAGCCTCCGGCTGGGAGGAAAGCCAGCAACAAGTCCTGTCCGCGGCCATATTAACGCTGCCCTCCGAGCTGAGAAGTTTTCAACAACGACAGCAGCACTTTTAAAGTCCAGCCAGGGGaacgcctcctcctcctcaccccgGGGGATTAGAGGTTGGCTAGGCAAGGTAGCCCTCGGTACCGCCCTCGGAATGAGCACAGTCGCTTTGGTCCATTCTCTCCACACCGGAACAGTTACCGCCATGGACCGCAAAGTTAAACTGAACTCCGCTGAGGGTGACTGGAAGGAGACCAAGGACTTCTTGCTGTCTCTGTCTGAGACGGACAGGCGTGGGTACTACAGGACGTCTAACTTCGTGCCTCTGGCCGACGTCTCAGTCTGGACTCCCACTGCAGGCGTTTCTGAACAAACTCTCTACCAGAGGAATGAAAAGTTGGACAAGAAGATTTCCCTCTACAGCGGTGACATCACCAAGCTGGAGATAGACGCTATTGTCAATGCAgCCAACAAGACTCTGCTCGGCGGAGGTGGAGtgGACGGAGCGATCCACCGTGCTGCAGGTCCAATGCTAAAAAAGGAGTGTGCTTCCCTCCAGGGCTGTGAGACCGGAGAGGCCAAGATCACTTGTGGCTACGGCCTCCCAGCAAAGTATGTGATCCACACTGTGGGGCCGATTGCACAAGGAGGAGtgggagagaaggagaagaatGCCTTGAGGTCGTGCTACAAGAACAGCCTGCACACAGCCACCGAAAACGCTGCACGCTCTGTGGCTTTCCCCTGCATCTCTACTGGAATCTACGGATATCCACCTGAGCAGGCTGTGCATGAGGCGTTGGCAACTGTGAGGGAGTATCTGGATGAGCATCATGACAAGctggaCAGAGTCATCTTCTGTGTGTTCTTGCCGACTGATAAGGAGCTGTATCTACAGACCCTCCCACTCTACTTCCCTGCCGAGGCCACAATCAAGAGTAAACTCTGAGAGTCGATTTGTCAGATTTGGTTGCTGTGGATACACACCGCTACGCTCAGCATCCAGATTCCTTTTCCTCGCTGTCGTCACAGATCAAAACCTTCTTCAGCAggaagataactcctaaatagGTGATTGCTTTTTTGAAGTGCACACTGGCTCTTCTGCAGATGTTAATtagttccttttttttccacGAATGGTTGAGAGAGGTGATGAAGGTGTGAAATTATACTGATAGTTCTTGTGAAAAATGGACCTTAAGCTGCACTCTAACTTGAcctttgttttctgtgttcaGTGGTGCATCACGCTAAGAGTTATGTGTCCTGTGCTATTAGAATATTGGTAttccagtatgtgtgtgtgtgcgcatatgTGTGAGACAATGACAAAAGCTTattaaaacaaatcacacaGGC
>XM_039812865.1
CTTCCacaacaaaaatggcacatGAGAACTAACCTAACCGACGTGTATCATCACTCAGTGTTCGTACCGAAAACGAAACCTAACCACACGGTGTGGCTGACACTGATCCCCGTGAAGCTGTAGTAACACGAACCGTTAGCCCCCTCGGCGTCACTCAGCATGGCACTGCAAATATCAGCTCTATTTTCATATATCAGAGCCCCACTGTGCACTGGCCCTCTGTCCCGTGTCCGCGCTGACTTCCAGGGAGCCGGTGTCAAGTTCAAACACATCTTAACTCCTGGAAGCCTCCGGCTGGGAGGAAAGCCAGCAACAAGTCCTGTCCGCGGCCATATTAACGCTGCCCTCCGAGCTGAGAAGTTTTCAACAACGACAGCAGCACTTTTAAAGTCCAGCCAGGGGaacgcctcctcctcctcaccccgGGGGATTAGAGGTTGGCTAGGCAAGGTAGCCCTCGGTACCGCCCTCGGAATGAGCACAGTCGCTTTGGTCCATTCTCTCCACACCGGAACAGTTACCGCCATGGACCGCAAAGTTAAACTGAACTCCGCTGAGGGTGACTGGAAGGAGACCAAGGACTTCTTGCTGTCTCTGTCTGAGACGGACAGGCGTGGGTACTACAGGACGTCTAACTTCGTGCCTCTGGCCGACGTCTCAGTCTGGACTCCCACTGCAGGCGTTTCTGAACAAACTCTCTACCAGAGGAATGAAAAGTTGGACAAGAAGATTTCCCTCTACAGCGGTGACATCACCAAGCTGGAGATAGACGCTATTGTCAATGCAgCCAACAAGACTCTGCTCGGCGGAGGTGGAGtgGACGGAGCGATCCACCGTGCTGCAGGTCCAATGCTAAAAAAGGAGTGTGCTTCCCTCCAGGGCTGTGAGACCGGAGAGGCCAAGATCACTTGTGGCTACGGCCTCCCAGCAAAGTATGTGATCCACACTGTGGGGCCGATTGCACAAGGAGGAGtgggagagaaggagaagaatGCCTTGAGGTCGTGCTACAAGAACAGCCTGCACACAGCCACCGAAAACGCTGCACGCTCTGTGGCTTTCCCCTGCATCTCTACTGGAATCTACGGATATCCACCTGAGCAGGCTGTGCATGAGGCGTTGGCAACTGTGAGGGAGTATCTGGATGAGCATCATGACAAGctggaCAGAGTCATCTTCTGTGTGTTCTTGCCGACTGATAAGGAGCTGTATCTACAGACCCTCCCACTCTACTTCCCTGCCGCTGACCAATGATAGCAGCTTATTGTTCAGAGGCCACAATCAAGAGTAAACTCTGAGAGTCGATTTGTCAGATTTGGTTGCTGTGGATACACACCGCTACGCTCAGCATCCAGATTCCTTTTCCTCGCTGTCGTCACAGATCAAAACCTTCTTCAGCAggaagataactcctaaatagGTGATTGCTTTTTTGAAGTGCACACTGGCTCTTCTGCAGATGTTAATtagttccttttttttccacGAATGGTTGAGAGAGGTGATGAAGGTGTGAAATTATACTGATAGTTCTTGTGAAAAATGGACCTTAAGCTGCACTCTAACTTGAcctttgttttctgtgttcaGTGGTGCATCACGCTAAGAGTTATGTGTCCTGTGCTATTAGAATATTGGTAttccagtatgtgtgtgtgtgcgcatatgTGTGAGACAATGACAAAAGCTTattaaaacaaatcacacaGGC
>XM_039812866.1
ACTTCCacaacaaaaatggcacatGAGAACTAACCTAACCGACGTGTATCATCACTCAGTGTTCGTACCGAAAACGAAACCTAACCACACGGTGTGGCTGACACTGATCCCCGTGAAGCTGTAGTAACACGAACCGTTAGCCCCCTCGGCGTCACTCAGCATGGCACTGCAAATATCAGCTCTATTTTCATATATCAGAGCCCCACTGTGCACTGGCCCTCTGTCCCGTGTCCGCGCTGACTTCCAGGGAGCCGGTGTCAAGTTCAAACACATCTTAACTCCTGGAAGCCTCCGGCTGGGAGGAAAGCCAGCAACAAGTCCTGTCCGCGGCCATATTAACGCTGCCCTCCGAGCTGAGAAGTTTTCAACAACGACAGCAGCACTTTTAAAGTCCAGCCAGGGGaacgcctcctcctcctcaccccgGGGGATTAGAGGTTGGCTAGGCAAGGTAGCCCTCGGTACCGCCCTCGGAATGAGCACAGTCGCTTTGGTCCATTCTCTCCACACCGGAACAGTTACCGCCATGGACCGCAAAGTTAAACTGAACTCCGCTGAGGGTGACTGGAAGGAGACCAAGGACTTCTTGCTGTCTCTGTCTGAGACGGACAGGCGTGGGTACTACAGGACGTCTAACTTCGTGCCTCTGGCCGACGTCTCAGTCTGGACTCCCACTGCAGGCGTTTCTGAACAAACTCTCTACCAGAGGAATGAAAAGTTGGACAAGAAGATTTCCCTCTACAGCGGTGACATCACCAAGCTGGAGATAGACGCTATTGTCAATGCAgCCAACAAGACTCTGCTCGGCGGAGGTGGAGATGTGATCCACACTGTGGGGCCGATTGCACAAGGAGGAGtgggagagaaggagaagaatGCCTTGAGGTCGTGCTACAAGAACAGCCTGCACACAGCCACCGAAAACGCTGCACGCTCTGTGGCTTTCCCCTGCATCTCTACTGGAATCTACGGATATCCACCTGAGCAGGCTGTGCATGAGGCGTTGGCAACTGTGAGGGAGTATCTGGATGAGCATCATGACAAGctggaCAGAGTCATCTTCTGTGTGTTCTTGCCGACTGATAAGGAGCTGTATCTACAGACCCTCCCACTCTACTTCCCTGCCGAGGCCACAATCAAGAGTAAACTCTGAGAGTCGATTTGTCAGATTTGGTTGCTGTGGATACACACCGCTACGCTCAGCATCCAGATTCCTTTTCCTCGCTGTCGTCACAGATCAAAACCTTCTTCAGCAggaagataactcctaaatagGTGATTGCTTTTTTGAAGTGCACACTGGCTCTTCTGCAGATGTTAATtagttccttttttttccacGAATGGTTGAGAGAGGTGATGAAGGTGTGAAATTATACTGATAGTTCTTGTGAAAAATGGACCTTAAGCTGCACTCTAACTTGAcctttgttttctgtgttcaGTGGTGCATCACGCTAAGAGTTATGTGTCCTGTGCTATTAGAATATTGGTAttccagtatgtgtgtgtgtgcgcatatgTGTGAGACAATGACAAAAGCTTattaaaacaaatcacacaGGC

Function

NR:

description
O-acetyl-ADP-ribose deacetylase MACROD1-like isoform X2

GO: NA

KEGG:

id description
K23518 MACROD, ymdB; O-acetyl-ADP-ribose deacetylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812864.1 False 1681 mRNA 0.51 10 23051417 23155343
XM_039812865.1 True 1711 mRNA 0.51 11 23051417 23155344
XM_039812866.1 False 1566 mRNA 0.50 9 23051417 23155345

Neighbor

gene id symbol gene type direction distance location
scyl1 scyl1 coding downstream 87463 22950544 ~ 22963954 (-)
LOC120566540 NA coding downstream 105489 22941936 ~ 22945928 (-)
ints5 ints5 coding downstream 111112 22935020 ~ 22940305 (-)
ganabb ganab coding downstream 116853 22919844 ~ 22934564 (-)
si:ch211-114c17.1 LOC103374192,LOC100701998,LOC102296932 coding downstream 132635 22910157 ~ 22918782 (-)
trnaw-cca_10 NA coding upstream 5514 23160859 ~ 23160930 (-)
trnaw-cca_11 NA coding upstream 6043 23161388 ~ 23161459 (-)
trnaw-cca_12 NA coding upstream 10012 23165357 ~ 23165428 (-)
kcnk4a LOC104959797 coding upstream 111569 23266914 ~ 23282656 (-)
si:dkeyp-115e12.6 LOC105026731 coding upstream 129974 23285319 ~ 23308063 (-)
G107220 NA non-coding downstream 77657 22928854 ~ 22973760 (-)
G107215 NA non-coding downstream 174958 22875496 ~ 22876459 (-)
G107160 NA non-coding downstream 195071 22856125 ~ 22856346 (-)
G107102 NA non-coding downstream 332647 22713037 ~ 22718770 (-)
G107097 NA non-coding downstream 365959 22683733 ~ 22685458 (-)
G107282 NA non-coding upstream 14803 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding upstream 24347 23179692 ~ 23181717 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding upstream 86692 23242037 ~ 23263899 (-)
G107610 NA non-coding upstream 636709 23792054 ~ 23792502 (-)
G107667 NA non-coding upstream 1044154 24199499 ~ 24259346 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 58188 22990987 ~ 22993229 (-)
G107117 NA other downstream 358586 22691160 ~ 22692831 (-)
G107015 NA other downstream 931350 22119685 ~ 22120067 (-)
G106988 NA other downstream 1260692 21790253 ~ 21790725 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 1863764 21178852 ~ 21187653 (-)
rnaseh2c rnaseh2c other upstream 28847 23184192 ~ 23187058 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 729243 23884588 ~ 23988901 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 1418096 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 1706625 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 2107827 25263172 ~ 25264864 (-)

Expression


Co-expression Network