slc30a9 (slc30a9,LOC103367187)


Basic Information

Item Value
gene id slc30a9
gene name slc30a9,LOC103367187
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 27396370 ~ 27408837 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812896.1
TCACTGTTGTGTCACAGGTCAggtcactgtgtgtgttgtttgcagCGTTACCATTAGTTTactctcgctttgccagaccctcctccaaagtttGACCATCTATTCTGAAATGGATACAGACTATGCAGAATAAACCTCACAACAGAAAGCAAGTTCCTGCACTTCGGTACCAAGCCCCGCTACAGCGAGGATGTTCCCCAGCCTGGCCCACAGACCATGGCATGTCTTCTGCAGGCTATCCTTGCAACACAGGGCGTCCCTGTCACAACGGTCCTCGAGGATCCCCCAGCTGTGCTACGGTTTTAAGAGTGGAGGCACACATAAGGTGTGGTTCTGCCTCCCAGACTGCCGTGTTGCTTCTCTAGGGCTGGCCAAGGTGCAGTACTACTCTACCTCTGGCAACAGTAAAGATGGTCCCTCAAAATCAGCATCAGGTGATTCTCCAACAGCAGAAAAGGTCCtgtctgctgctgcaaaagCCACCCCAGCACCGGAAGATGTTTCTGGTGCAACACCTCAGGGACTGACTAAAGCTGAGACAATTCAAGTGAAAGTTCGAGCAGTCCTGAAGAAAAGAGAATACGGAACCAAGTACACTCAGAACAACTTTATCACCGCAGTCAGAGCCATGAATGAATTCTGCCTCAAACCAAGTGATCTGGAGCAGCTTCGCAAGATCAGAAGACGCAGCCCTCACGACGACACAGAGGCTTTCACGGTCTTTTTGCGGTCAGATGTGGAGGCCAAAGCACTAGAGGTATGGGGCAGCCATGAAGCTCTAGCCCGAGAGAGAAATCTCAGGAAAGAAGTGGAGAGAGAGTTTCAAGAAAGTATTTTTAGGAATCAACAGTTGTTAAAGGAATACAAAGACTTTTGGGGAAACACTAAGCCTCGATCAGGCCAGAGGACAACTTTCCTACAAGGGCCGGGGAAGGTGGTCATGGTCGCTATTTGCATCAATGGGCTGAATTTCATCTTCAAGCTGCTGGCTTGGGTCTACACCGGATCAGCTAGCATGTTCTCAGAGGCCATCCACTCTCTGGCCGACACCTGCAACCAGGCTCTGCTCGCCCTGGGAATCAGCCAATCTGTCCGCAACCCTGATGCAGGGCACCCGTATGGCTTCTCCAACATGCGCTACATTGCCTCCCTCATCAGCGGGGTGGGCATTTTTATGATGGGAGCAGGCCTCTCCTGGTACCATGGCATCATGGGATTGCTGCACCCACAGCCCATTGAATCTTTGTTATGGGCTTACTGTATTTTGGCGGGCTCTCTGGTGTCTGAAGGAGCCACATTACTAGTAGCCATAAATGAGATAAAGAGGAGCGCCCAACTTCATGGACTGTCTTTTTATGAATATGTAATGCAGAGTCGAGACCCCAGTACTAATGTAGTGCTGCTGGAGGATGCTGCTGCTGTATTAGGAGTCATCATGGCTTCTGGCTGCATGGGCCTCACCTCACTTACAGGTAACCCCCTCTATGACAGTATGGGTTCTATCTGCGTGGGCACGTTGCTGGGCGCCGTCTCAGCCTTCCTCATCTACACTAACACAGAGGCTCTGCTGGGTCGCTCCATACAGGCAGAACGTGTACAGAAGCTCACCGAGTTCCTGGAGAACGACCCCGCAGTAAGGGCCATCCACGATGTGAAGGCCACTGATCTGGGACTGAGCAAAGTGCGATTCAAGGCTGAAGTTGACTTTGATGGCCGAGTGGTGACACGGTCTTATCTGGAAAAACAAGACATTGACCAAATCCTCAATGAAATTCAGCAGGTGAAGACCCCCGAGGAGCTGGAGAACTTCATGCTgaaacacggggagaacatcaTTGACACCCTGGGGGCCGAGGTGGACCGCTTAGAGAAAGAACTCAAGCAACGGAACCCAGAGGTCCGTCATGTAGACTTGGAGATACTATAATACCTTACGGGTCATCGTGCTGTAACAAGAAGAGGAAAAGGTGATCAGCAGGTGACTGTACTGATCCAAAGATGAGGTACTGGATGGATGCAAATTTCCAGTGTAAATAAGTTGTCCATGATGACAAAATGTACCAAAAGATTggaccatcatcatcatcatcatctcaaaCTGGTTTTTAATCATTCAAGATGTCACCCTGTACAATGCGGTATATCAACATGATCTCCTACTTGGCGTGAAACATTGTGACTGTGCACAAGTGACCCGCTTTTGCTTTTCATTCTGCTTTTACTTTAGTCAGTCAGCTGCAGCACAGGACACACCTGCCTGCTAAACATGTTACTATGCTTCAGGAGTCCTTTCATCTGTGTTTCAGAGGATGGATGTGTATCTTTGAAGGTGTTAATAGTGTAATACCCCCCCGTTGGCTGTAACAAGGCTGCCACTGCTGAAGGAGTGAGAATAAATTtgaaataatttattaaattatGTTGCTTTCCTTTT
>XM_039812897.1
GTCACTGTTGTGTCACAGGTCAggtcactgtgtgtgttgtttgcagCGTTACCATTAGTTTactctcgctttgccagaccctcctccaaagtttGACCATCTATTCTGAAATGGATACAGACTATGCAGAATAAACCTCACAACAGAAAGTTGACAAGCTAACCCAACAGTGACCGTGCTATCTGTGACCAAGCCCCGCTACAGCGAGGATGTTCCCCAGCCTGGCCCACAGACCATGGCATGTCTTCTGCAGGCTATCCTTGCAACACAGGGCGTCCCTGTCACAACGGTCCTCGAGGATCCCCCAGCTGTGCTACGGTTTTAAGAGTGGAGGCACACATAAGGTGTGGTTCTGCCTCCCAGACTGCCGTGTTGCTTCTCTAGGGCTGGCCAAGGTGCAGTACTACTCTACCTCTGGCAACAGTAAAGATGGTCCCTCAAAATCAGCATCAGGTGATTCTCCAACAGCAGAAAAGGTCCtgtctgctgctgcaaaagCCACCCCAGCACCGGAAGATGTTTCTGGTGCAACACCTCAGGGACTGACTAAAGCTGAGACAATTCAAGTGAAAGTTCGAGCAGTCCTGAAGAAAAGAGAATACGGAACCAAGTACACTCAGAACAACTTTATCACCGCAGTCAGAGCCATGAATGAATTCTGCCTCAAACCAAGTGATCTGGAGCAGCTTCGCAAGATCAGAAGACGCAGCCCTCACGACGACACAGAGGCTTTCACGGTCTTTTTGCGGTCAGATGTGGAGGCCAAAGCACTAGAGGTATGGGGCAGCCATGAAGCTCTAGCCCGAGAGAGAAATCTCAGGAAAGAAGTGGAGAGAGAGTTTCAAGAAAGTATTTTTAGGAATCAACAGTTGTTAAAGGAATACAAAGACTTTTGGGGAAACACTAAGCCTCGATCAGGCCAGAGGACAACTTTCCTACAAGGGCCGGGGAAGGTGGTCATGGTCGCTATTTGCATCAATGGGCTGAATTTCATCTTCAAGCTGCTGGCTTGGGTCTACACCGGATCAGCTAGCATGTTCTCAGAGGCCATCCACTCTCTGGCCGACACCTGCAACCAGGCTCTGCTCGCCCTGGGAATCAGCCAATCTGTCCGCAACCCTGATGCAGGGCACCCGTATGGCTTCTCCAACATGCGCTACATTGCCTCCCTCATCAGCGGGGTGGGCATTTTTATGATGGGAGCAGGCCTCTCCTGGTACCATGGCATCATGGGATTGCTGCACCCACAGCCCATTGAATCTTTGTTATGGGCTTACTGTATTTTGGCGGGCTCTCTGGTGTCTGAAGGAGCCACATTACTAGTAGCCATAAATGAGATAAAGAGGAGCGCCCAACTTCATGGACTGTCTTTTTATGAATATGTAATGCAGAGTCGAGACCCCAGTACTAATGTAGTGCTGCTGGAGGATGCTGCTGCTGTATTAGGAGTCATCATGGCTTCTGGCTGCATGGGCCTCACCTCACTTACAGGTAACCCCCTCTATGACAGTATGGGTTCTATCTGCGTGGGCACGTTGCTGGGCGCCGTCTCAGCCTTCCTCATCTACACTAACACAGAGGCTCTGCTGGGTCGCTCCATACAGGCAGAACGTGTACAGAAGCTCACCGAGTTCCTGGAGAACGACCCCGCAGTAAGGGCCATCCACGATGTGAAGGCCACTGATCTGGGACTGAGCAAAGTGCGATTCAAGGCTGAAGTTGACTTTGATGGCCGAGTGGTGACACGGTCTTATCTGGAAAAACAAGACATTGACCAAATCCTCAATGAAATTCAGCAGGTGAAGACCCCCGAGGAGCTGGAGAACTTCATGCTgaaacacggggagaacatcaTTGACACCCTGGGGGCCGAGGTGGACCGCTTAGAGAAAGAACTCAAGCAACGGAACCCAGAGGTCCGTCATGTAGACTTGGAGATACTATAATACCTTACGGGTCATCGTGCTGTAACAAGAAGAGGAAAAGGTGAAAAGGAGGGCCAAGCTTGCCTCCGctatctctcccccccccccccacc
>XM_039812898.1
CGTTAATCTGTTCAGTTGACAAGCTAACCCAACAGTGACCGTGCTATCTGTGACCAAGCCCCGCTACAGCGAGGATGTTCCCCAGCCTGGCCCACAGACCATGGCATGTCTTCTGCAGGCTATCCTTGCAACACAGGGCGTCCCTGTCACAACGGTCCTCGAGGATCCCCCAGCTGTGCTACGGTTTTAAGAGTGGAGGCACACATAAGGTGTGGTTCTGCCTCCCAGACTGCCGTGTTGCTTCTCTAGGGCTGGCCAAGGTGCAGTACTACTCTACCTCTGGCAACAGTAAAGATGGTCCCTCAAAATCAGCATCAGGTGATTCTCCAACAGCAGAAAAGGTCCtgtctgctgctgcaaaagCCACCCCAGCACCGGAAGATGTTTCTGGTGCAACACCTCAGGGACTGACTAAAGCTGAGACAATTCAAGTGAAAGTTCGAGCAGTCCTGAAGAAAAGAGAATACGGAACCAAGTACACTCAGAACAACTTTATCACCGCAGTCAGAGCCATGAATGAATTCTGCCTCAAACCAAGTGATCTGGAGCAGCTTCGCAAGATCAGAAGACGCAGCCCTCACGACGACACAGAGGCTTTCACGGTCTTTTTGCGGTCAGATGTGGAGGCCAAAGCACTAGAGGTATGGGGCAGCCATGAAGCTCTAGCCCGAGAGAGAAATCTCAGGAAAGAAGTGGAGAGAGAGTTTCAAGAAAGTATTTTTAGGAATCAACAGTTGTTAAAGGAATACAAAGACTTTTGGGGAAACACTAAGCCTCGATCAGGCCAGAGGACAACTTTCCTACAAGGGCCGGGGAAGGTGGTCATGGTCGCTATTTGCATCAATGGGCTGAATTTCATCTTCAAGCTGCTGGCTTGGGTCTACACCGGATCAGCTAGCATGTTCTCAGAGGCCATCCACTCTCTGGCCGACACCTGCAACCAGGCTCTGCTCGCCCTGGGAATCAGCCAATCTGTCCGCAACCCTGATGCAGGGCACCCGTATGGCTTCTCCAACATGCGCTACATTGCCTCCCTCATCAGCGGGGTGGGCATTTTTATGATGGGAGCAGGCCTCTCCTGGTACCATGGCATCATGGGATTGCTGCACCCACAGCCCATTGAATCTTTGTTATGGGCTTACTGTATTTTGGCGGGCTCTCTGGTGTCTGAAGGAGCCACATTACTAGTAGCCATAAATGAGATAAAGAGGAGCGCCCAACTTCATGGACTGTCTTTTTATGAATATGTAATGCAGAGTCGAGACCCCAGTACTAATGTAGTGCTGCTGGAGGATGCTGCTGCTGTATTAGGAGTCATCATGGCTTCTGGCTGCATGGGCCTCACCTCACTTACAGGTAACCCCCTCTATGACAGTATGGGTTCTATCTGCGTGGGCACGTTGCTGGGCGCCGTCTCAGCCTTCCTCATCTACACTAACACAGAGGCTCTGCTGGGTCGCTCCATACAGGCAGAACGTGTACAGAAGCTCACCGAGTTCCTGGAGAACGACCCCGCAGTAAGGGCCATCCACGATGTGAAGGCCACTGATCTGGGACTGAGCAAAGTGCGATTCAAGGCTGAAGTTGACTTTGATGGCCGAGTGGTGACACGGTCTTATCTGGAAAAACAAGACATTGACCAAATCCTCAATGAAATTCAGCAGGTGAAGACCCCCGAGGAGCTGGAGAACTTCATGCTgaaacacggggagaacatcaTTGACACCCTGGGGGCCGAGGTGGACCGCTTAGAGAAAGAACTCAAGCAACGGAACCCAGAGGTCCGTCATGTAGACTTGGAGATACTATAATACCTTACGGGTCATCGTGCTGTAACAAGAAGAGGAAAAGGTGAAAAGGAGGGCCAAGCTTGCCTCCGctatctctcccccccccccccacc
>XM_039812899.1
GTCACTGTTGTGTCACAGGTCAggtcactgtgtgtgttgtttgcagCGTTACCATTAGTTTactctcgctttgccagaccctcctccaaagtttGACCATCTATTCTGAAATGGATACAGACTATGCAGAATAAACCTCACAACAGAAAGCAAGTTCCTGCACTTCGGTACCAAGCCCCGCTACAGCGAGGATGTTCCCCAGCCTGGCCCACAGACCATGGCATGTCTTCTGCAGGCTATCCTTGCAACACAGGGCGTCCCTGTCACAACGGTCCTCGAGGATCCCCCAGCTGTGCTACGGTTTTAAGAGTGGAGGCACACATAAGGTGTGGTTCTGCCTCCCAGACTGCCGTGTTGCTTCTCTAGGGCTGGCCAAGGTGCAGTACTACTCTACCTCTGGCAACAGTAAAGATGGTCCCTCAAAATCAGCATCAGGTGATTCTCCAACAGCAGAAAAGGTCCtgtctgctgctgcaaaagCCACCCCAGGTGCAACACCTCAGGGACTGACTAAAGCTGAGACAATTCAAGTGAAAGTTCGAGCAGTCCTGAAGAAAAGAGAATACGGAACCAAGTACACTCAGAACAACTTTATCACCGCAGTCAGAGCCATGAATGAATTCTGCCTCAAACCAAGTGATCTGGAGCAGCTTCGCAAGATCAGAAGACGCAGCCCTCACGACGACACAGAGGCTTTCACGGTCTTTTTGCGGTCAGATGTGGAGGCCAAAGCACTAGAGGTATGGGGCAGCCATGAAGCTCTAGCCCGAGAGAGAAATCTCAGGAAAGAAGTGGAGAGAGAGTTTCAAGAAAGTATTTTTAGGAATCAACAGTTGTTAAAGGAATACAAAGACTTTTGGGGAAACACTAAGCCTCGATCAGGCCAGAGGACAACTTTCCTACAAGGGCCGGGGAAGGTGGTCATGGTCGCTATTTGCATCAATGGGCTGAATTTCATCTTCAAGCTGCTGGCTTGGGTCTACACCGGATCAGCTAGCATGTTCTCAGAGGCCATCCACTCTCTGGCCGACACCTGCAACCAGGCTCTGCTCGCCCTGGGAATCAGCCAATCTGTCCGCAACCCTGATGCAGGGCACCCGTATGGCTTCTCCAACATGCGCTACATTGCCTCCCTCATCAGCGGGGTGGGCATTTTTATGATGGGAGCAGGCCTCTCCTGGTACCATGGCATCATGGGATTGCTGCACCCACAGCCCATTGAATCTTTGTTATGGGCTTACTGTATTTTGGCGGGCTCTCTGGTGTCTGAAGGAGCCACATTACTAGTAGCCATAAATGAGATAAAGAGGAGCGCCCAACTTCATGGACTGTCTTTTTATGAATATGTAATGCAGAGTCGAGACCCCAGTACTAATGTAGTGCTGCTGGAGGATGCTGCTGCTGTATTAGGAGTCATCATGGCTTCTGGCTGCATGGGCCTCACCTCACTTACAGGTAACCCCCTCTATGACAGTATGGGTTCTATCTGCGTGGGCACGTTGCTGGGCGCCGTCTCAGCCTTCCTCATCTACACTAACACAGAGGCTCTGCTGGGTCGCTCCATACAGGCAGAACGTGTACAGAAGCTCACCGAGTTCCTGGAGAACGACCCCGCAGTAAGGGCCATCCACGATGTGAAGGCCACTGATCTGGGACTGAGCAAAGTGCGATTCAAGGCTGAAGTTGACTTTGATGGCCGAGTGGTGACACGGTCTTATCTGGAAAAACAAGACATTGACCAAATCCTCAATGAAATTCAGCAGGTGAAGACCCCCGAGGAGCTGGAGAACTTCATGCTgaaacacggggagaacatcaTTGACACCCTGGGGGCCGAGGTGGACCGCTTAGAGAAAGAACTCAAGCAACGGAACCCAGAGGTCCGTCATGTAGACTTGGAGATACTATAATACCTTACGGGTCATCGTGCTGTAACAAGAAGAGGAAAAGGTGAAAAGGAGGGCCAAGCTTGCCTCCGctatctctcccccccccccccacc

Function

symbol description
slc30a9 Predicted to enable nuclear receptor coactivator activity and zinc ion transmembrane transporter activity. Predicted to be involved in cellular zinc ion homeostasis; positive regulation of transcription by RNA polymerase II; and zinc ion transport. Predicted to act upstream of or within cation transport and transmembrane transport. Predicted to be located in cytoplasmic vesicle and endoplasmic reticulum. Predicted to be active in nucleus. Orthologous to human SLC30A9 (solute carrier family 30 member 9).

NR:

description
zinc transporter 9

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006812 cation transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0000166 nucleotide binding molecular_function
GO:0008324 cation transmembrane transporter activity molecular_function

KEGG:

id description
K14696 SLC30A9, ZNT9; solute carrier family 30 (zinc transporter), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812896.1 True 2434 mRNA 0.49 20 27396370 27408836
XM_039812897.1 False 2038 mRNA 0.51 20 27397684 27408837
XM_039812898.1 False 1903 mRNA 0.52 19 27397684 27408370
XM_039812899.1 False 2002 mRNA 0.51 18 27397684 27408837

Neighbor

gene id symbol gene type direction distance location
LOC120567138 rab11fip5,LOC106925811,LOC103471510 coding downstream 146193 27234682 ~ 27250177 (-)
sfxn5b sfxn5,LOC100712369,LOC102194966,LOC101471447,LOC102299301 coding downstream 163083 27215856 ~ 27233287 (-)
smyd5 smyd5 coding downstream 181389 27204954 ~ 27214981 (-)
gfra4b LOC103367360,LOC104958665,LOC100709061,LOC102195730 coding downstream 217809 27132673 ~ 27178561 (-)
LOC120566770 NA coding downstream 481706 26910920 ~ 26914664 (-)
gsr gsr coding upstream 1727 27410564 ~ 27420419 (-)
LOC120566264 NA coding upstream 23504 27432341 ~ 27445047 (-)
hs3st1 hs3st1,LOC102780858 coding upstream 69988 27478825 ~ 27481536 (-)
rab28 rab28 coding upstream 296375 27705212 ~ 27735519 (-)
nkx3-2 nkx3-2 coding upstream 331957 27740794 ~ 27744082 (-)
LOC120567396 NA non-coding downstream 339 27394158 ~ 27396031 (-)
G108194 NA non-coding downstream 304695 27091382 ~ 27091675 (-)
G108186 NA non-coding downstream 360285 27035515 ~ 27036085 (-)
LOC120566771 NA non-coding downstream 363203 27023653 ~ 27033167 (-)
G108182 enox2,LOC106949969,LOC107093408,LOC106918471,LOC106514441,LOC107379070 non-coding downstream 388333 27007812 ~ 27008037 (-)
G108351 NA non-coding upstream 348956 27757793 ~ 27758695 (-)
G108352 NA non-coding upstream 363014 27771851 ~ 27772071 (-)
G108353 NA non-coding upstream 363839 27772676 ~ 27772981 (-)
LOC120566995 NA non-coding upstream 559227 27968064 ~ 27970362 (-)
G108422 NA non-coding upstream 572213 27981050 ~ 27981447 (-)
atp8a1 atp8a1,LOC102786596 other downstream 18249 27269370 ~ 27378121 (-)
LOC120567151 bend4,LOC102786006 other downstream 133669 27252395 ~ 27262701 (-)
LOC120566767 NA other downstream 300473 27068521 ~ 27095897 (-)
G108191 NA other downstream 330423 27065418 ~ 27065947 (-)
G108181 LOC103390578 other downstream 395359 26989264 ~ 27001011 (-)
aurkb fbxl12,LOC103367279,LOC104928693,LOC101076892,LOC103149573 other upstream 371295 27780132 ~ 27790211 (-)
LOC120567057 NA other upstream 428731 27837568 ~ 27839107 (-)
LOC120566991 NA other upstream 543419 27952256 ~ 27955694 (-)
G108433 neto1,LOC101071133 other upstream 612900 28021737 ~ 28023229 (-)
LOC120566547 NA other upstream 615733 28024570 ~ 28038700 (-)

Expression


Co-expression Network