LOC120566438


Basic Information

Item Value
gene id LOC120566438
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 27421681 ~ 27426082 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812903.1
CAGCTAACGTGAGCTACGACCAGCTAAAGCAAAGCGGCTCGGTTGGCCCCCTTGACAAGCGATAATATACCCGTGCAGAGACAGgaattattcatttaaaaacatataACGGATCGAAACACAACACTCTTATAAGTGAGAAGACGTCTCACGTGTCAGTTGACGGTTACCTCTTCTCTGACTCGTGCCCCACTGTATGATCGCAGCCATTGAATTAGTGGGACCTAATAATACCTGCTGCCAGATGACCAGCGGACCTCACCGCTCAACATGAATCCTGGCAGCTATCAAAGCATGCTGTCGTCTGTGAACGGCGGGCATCCCAATGTGGTTTTGGATCGTGTTCTGAACACTTCAAATGTGAGGTGTTGTCAGAAATGTGGATTCGCTTCTACAGATGCTGCGTTGTTCAAAAAGCATATGATCGAGCATAGGGGGACAACAaggttttactgtttttattgcAACAAAGTCTCGTTCAGTGAGGCAGAGTTAAACGCTCACCTGAAGCAACACAATTCAAAGTATCCATTTAAATGTCCTCACTGTGGACAGGGCTATATGAGGAGGCTGTGCCTTGTGAAGCACATTGAGCGTTTGCATAGTACAAGCGTTAGTAAAGGACCTGGTGACCCTGGCACGACAAAAAATCAACATGTTTCTGTTTCCAGTGCCTTATCAAGTGTGCCCACTGCTGATCCATCGCCACTTCGACCAACTGTTCGAGTAACCGTACCTGCCCTGAGTACATCTGTGGTCAGACTGGGTAAAGATgaacagagaggaaaaacaCTGGACACAAATGTATCAAATGCCACAAATGGTAATGCAGAGCATTTGACCCCTTTTAATGGACTCATTCAGCACAACCGGGCTCTGACGGTTTCCCTTCCAGAGGAAGTAACTATCCCTGCTGGCTGTTTGGTTGAACTTGTTGAGGTAAAAACTGTCAATGGGACAAAGGAGCTAAAGCTGAGGCTCGTCTCTCAACAAGAAAACAAGTCCGTGATTAAAGACACCAGGACCACAGTCTCTCAAAACACTGCACTGGGAAAGCCATTCCTATCTGCATTAAATCATCCAAACACCGTGAAGTCTATGAGTATGGGAATGTGCACAGTTAACAGGAAACAGTGTGACACAAAGACTGTGAATGTGGAGCGTCCTGCAGTTGTCCCAGTCAATATTTCCAAAAACCTCCCGAATCAAGTAAGCAAGGAAAAAGGTGGACTGAAAAGATCATCACAAGAAATAATCAACTTGGAATGTCACACAGTCGTTCCAAACAAGGTTCCCAAAAGCATCCTCAATCCTGTAAGAGAAGGAAATAGTGGGATCAAAGTTACACAGAGAGAGCCCGTCAACCACAATTCAGCTCTGCCCTCTGTTATCTCTAACACGGTTGTCAACAGGTTGACTCACACCCTGCATCCAGAAAACGTGGGAGCGTGTGTTTCTCAGAGAGCAATGGATAAGAGAAATAATTTAATTCCAGAGCATTCCAAGAGTATCCCACCCAGGAGGGCAAGTGACATAAAAATCATTCCTCAAGATGTGTCGGTGGCTGTTAAGCAGGAGCCTGGGGAGGTGCTCCTCAAAAACACCActtctttaaaaaagaagaaagaggccGTGGGCTTGAACCAGCAAAAGTCAACTTCTCCTTCCTTGAGTGTTCTCTTAGCTGCAGCGGCCCAAGTGAGACCTCCAGCGACTTTAGTTTGTAAGGATAATGTTGTCGCAAAGCCATCTTCTTCAGTGCCAAGGACTCTAAACGAGCTCTCATCAGTCAAAACACAGGTGCTTTCCAACCGCACAAATTCAAAGATCTCCACTTGGACCCAGGAAGTCCGAACCAATGAGAGAGCCGGAGAAGGAGACACGCTAGAGCCCGAGGGTTTTCCCatcatctcttctgtgttttcatTAAGTCAACAACCGGAGGATGTCCAAGGCTCCATGCAGCCGCTGGTTATGGCTCTGCGTGGTATAGTGATGAATAAAAGTAACAGTTCTGGTAGTGCAACTCAAGATCACATCAAGATGAACGGCACAGAGCAGGTGAAGGAGGTGCCAGCACCGGGGTTCTGTGCACAGGTGGCCACAAAAGATGGATCCATCATCCGCAAACTTTTATTGACAGAGCGGACCAGTGAGTCCGTCAAATTAGAGGAGCAGGATAAGGGTATTCAACACCCTCCTACACTGACCCACAACCATGTCCATATCAAGGAGGAAAAAAATAGCACGGCGCCAACAGACAATAAGAACCGCCGTCACACTCCTGCTTCACAATCTTCAGCAGATGAGGAATCTGTTTCCGAAACTGCTGCACATGTAAATGCACCCGAGACTGCAGAGCCTCTACGGCAAATGGCAAAAAGTGAGAACGACATCTCAAAGTTCCTGACTGTCTCTCTGAAAAGGGTACAAGTAGGCGTGTGGAAGAAAACCAAGAAGGGGCTGAAACTTAGAATATCCAAGTATAAGACTCGGATACCCGTGAGCAGTCTAACGGATTGCACAGTTATTTACCCGATGCCGCTGAAGGTGGACCAACTGGTGAAACGGCCGGGCCCCAACCAGCCTGTGGTGGTGCTCAATCACCCAAAGCCTCGGGCCTCCATTCAGGGAGCGAGAGCAGACACTTTAGCAGACACAGGAGCCTCTAATGGAGCTCCAAAATGCCAAATCTTAAAAATGAGGCTGAGCAAAGTGATGGGGCAGAAGTATGAGGTGATGGGGTGCACGGTTGGAGTCTTTCCATGAATATATCAGACAATGTGTCAGTGGACAGACGTGTACATTTATGAGAAAATAAGTAGTATTACAATGGGAAGATGTTGACGTAACGTTATTTTCTCTATGGGAGCACACAATTTAAAAAGAGTGGACATCTGATTATCAGTGAACATTGTGTTACACGTATGTTAATATAGGCATGGGATATGGAGTATTTAAGTGCAATGAAAGGGAACATGGACCATCTACTGTAGTAGATTGCAGTCAGTAATACACAGATGTTGGATTACTGTTTTAAAGACGTTTGAGAAACAAGTAGATCTGTCAGAGTTGAGGCATTAATGCATGCTGTTTACTTAAAAAGgataacatactgtatttatttttttgtttgcatcAGTAATATTTTGCTGTTCATCTGGCTCCTCTAAGATACAACCTGAACTAGGGAAAGTACAGCTGGGAGTATCACATCTTTGTGTAGAGCATAAACCATGTCATGAATAAATACACGTAACGTGCACGGCTCCCAGTTGTAATGATGGAACAATCTGTGGTGGATATTAAGTAATGGTGAAATGTTTGGTTTGTGATGACATGTACTTGACAGTTAGATGTCGTAGATTGTGGGCGAAAGCTCACTTGCAATATTTAGCACAAACAATATACAATGAAAAAATCTCTTATTCCAATGTGACTCTCCATTTCCCCCCATTTTACTccgaaaacaaaagaaaacaaatcaatTTCCAATCATCAGATATAGAACAGCACTTGCAAGCCTATACAATTTTTTGCTTCTTCGTTGGTTTGTTGTGTTGATGGCTAGTTGTTTAAACTTTTATGCTGCATCCCAATTCAGGAGCTGCACCCAAAAAGTAAAATTTTCAACACGGATTGCCTTAAAAGTGGTCAATAAGAAGCGTCCCATTTCAAAAGCTCCTCTAAATTTGGCCTGAGCAATGTGGCTTTCAGAGAAGCCGCAGCCAGTGTCACGCGCAGCACTCTGTATCGGCCAATCGTGTCGTGGTGCATTTAGGCACTCTTTGCAACTCTTAGATTTGGTAAATATTGCGTGACCATGTCGTATTCATCAGATGGTCAACAGTCAATGGTAAATTCATCAAATGAACAGGACCAATGAAAAGGAAGATGCAAGGTGTAAATAATGGAAGCTGGGCATGCATACCACTGTTTGTTCTCGTTATTAGTTTGGATGTGTTGTAAATCACTGGGTGCTGCAGAGAAACGGACGTTATGTGTGCCAATGTCGTCCTTAATGTGTTGTGTGAAATTAAATGTCACAGTTCTGTAAACTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812903.1 True 4062 mRNA 0.44 2 27421681 27426082

Neighbor

gene id symbol gene type direction distance location
shisa3 shisa3,LOC102786300 coding upstream 153724 27263759 ~ 27267957 (+)
LOC120567492 NA coding upstream 281227 27140336 ~ 27140454 (+)
LOC120566768 enox2,LOC101473670,LOC100709872,LOC102784575,LOC102307254 coding upstream 352466 26844687 ~ 27069215 (+)
mars2 mars2 coding upstream 934850 26483695 ~ 26486831 (+)
gla gla coding upstream 963769 26451784 ~ 26457912 (+)
cops6 cops6 coding downstream 364206 27790288 ~ 27796688 (+)
gpc2 gpc2,LOC104944563 coding downstream 411511 27837593 ~ 27849601 (+)
LOC120566981 NA coding downstream 465985 27892067 ~ 27905066 (+)
LOC120566983 NA coding downstream 568383 27994465 ~ 27996914 (+)
LOC120566548 NA coding downstream 613766 28039848 ~ 28042368 (+)
G108246 NA non-coding upstream 107323 27309089 ~ 27314358 (+)
G108240 LOC107680621 non-coding upstream 121213 27287214 ~ 27300468 (+)
G108233 NA non-coding upstream 147136 27269608 ~ 27274545 (+)
G108229 bend4 non-coding upstream 166968 27252203 ~ 27254713 (+)
LOC120567287 LOC107712283,LOC107663761,LOC107746645,LOC107662224 non-coding upstream 313411 27107475 ~ 27108270 (+)
LOC120566664 NA non-coding downstream 61468 27487550 ~ 27704230 (+)
G108307 NA non-coding downstream 279153 27705235 ~ 27710738 (+)
LOC120566668 NA non-coding downstream 297555 27723637 ~ 27755217 (+)
G108392 NA non-coding downstream 449965 27876047 ~ 27876270 (+)
G108402 NA non-coding downstream 483874 27909956 ~ 27910263 (+)
grxcr1a grxcr1,si:dkey-109l4.6,LOC102787492,LOC106600617,LOC107601454 other upstream 28060 27387646 ~ 27393621 (+)
timm8a timm8a other upstream 942384 26476796 ~ 26479297 (+)
btk btk other upstream 945111 26461288 ~ 26476570 (+)
sept6 sept6,LOC106945475 other upstream 2111463 25291607 ~ 25310218 (+)
rpl39 NA other upstream 2139474 25279568 ~ 25282207 (+)
LOC120566985 NA other downstream 550245 27976327 ~ 28046891 (+)
fgfrl1a fgfrl1,LOC104949359 other downstream 1057595 28483677 ~ 28558216 (+)
maea maea other downstream 1147585 28573667 ~ 28681112 (+)
gria2b gria2,LOC106611560,LOC106604527 other downstream 2779903 30205985 ~ 30282627 (+)
LOC120566277 NA other downstream 2933179 30359261 ~ 30363701 (+)

Expression


Co-expression Network