zic6 (LOC104917996,LOC104957987,LOC103376516,LOC101465244,LOC102782580,LOC102312981)


Basic Information

Item Value
gene id zic6
gene name LOC104917996,LOC104957987,LOC103376516,LOC101465244,LOC102782580,LOC102312981
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24322057 ~ 24330760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812938.1
TACATTCATTCTAACTAGATGTGTTAGAGTCAGCAGCTAAAGGTTATTTAAGTGCATAATTTGATAAATGACTTAGATGCATGATCATATTTTCTCATAAAATGAGATTTGCCTATGGCAGACCAAATGTCTGGATTTTCTCTTACAGCAATGttgagtaattttttttgtctatgTTGTCTGGCCGGTAGCCTACAGCTTGGCTGGCTCAGGCCGCCTTTGCTATAGAAGAGTTTGTGAACTTGAAGTTAACTCAATAGTGACCAGACAAACGTTAAATCTTCATCTCCTGAAAACAATAGCAAAACCATTAGCCCAATAGTACTTCCATACCACtgtatgtgaatgtgttttccgtatttccattttaaacaGGTAGACAATGGTCAGTGTATCCCAACGGCACAGTTAAATAAATATCGTGAGTCACAATTTTGCTTAAATGGACATTGTGTTGAATGAACCTGCAGGTTTTTGCTGTGGTTAAATGAGCCAACTCCAAGACTATGTCTTTGCCTTGATTTAATAGAAAATGAATTGCATTGGGTGCATTCTCCATGACACTTTTTTTCAGTTCTCTTACATTCATTTGATCCCACAACAGTATAAAGGCTCAGGTTGTGGTCTGAACTTCTACAATCCAGTAGATTTCATACGttatagaataaaataaattttgGCTCACGTTTGTTTAAGCGAAAATACTGTTTATACATGCAACATTTGCTTccactttttttctgaatgcTTAGGGTTTTCACAAATCAAATATTTACATTATGCGTTGTATTTTCaagcacatgtacagtataatcAAATGTTTCTGATTTCTGTGCAAGTGTAGCAGCTGATAATGACAAGGAATTTTCCACCATAGATAGTAAAGCTTTACATGACGAATGACAATTTACGTATCTTGTAATTTGGAATATCACAATGTAACACTTGACTGTATTGCATCGCTTTCGGGCATATTTTTGTGCTGTCTATGTGTTTGTTATCAGAGGAAACAGAAATGTTTTGTCATTTCGTATTCGCTTCATATTGTTCAACTTAGGTTTATACTCGCATACAGTATAACTGCACAGATTGTCATGGATATTACATACTTTATATGGTCATTTGGGTCTTGAGTGACTGCTACAGAACTAGGTGTTTGCCTTCATATGGCTGATGGAGAGGGCTAATTGACTTCTTGCTGTGATTTAcaggagcatctgtctgcaaaTGGACGCATCCCAAACCTGTTAATTCATCTAAATTTCATAAATTCTCCCTCATCACTTACAATATCTCAGCACTACTCCACACTAATACAGTTGCATGTTGCATGTACACACAGGGATTCCTGTCTGTACCACATATATGAACATAGTAATGTTGtgtctgagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactttactttTTGTAGTGTAACACCTGGTGTTTCTTATACACACTGTTTATAGCCTAAATGTTTATCGCCTTTGAGCAAATAGTTTTCCCCAAAAAGGCATTGCATGTTATTTTAAAAGAATTCTTAAAtgggttaaataaataaaatgagctGAATTTTCAATCCTATCTACAACATGACATTATATTGTAACTCTGGTCTTCTAACTggcatttattttctgtttgatTTCATCTCTTCATATCGCCCCTTTGTCATTCATTTTGTCCATATTCACTGTACTGGAAGTGACTGGGATCTTATGGATGTAAAGACTATTTCCTGACATGAGTGTTTTGATAGTTGGGAGTAATATTTTGTGTGCAACAGTCACTAGGATTTTGTCTGGCCTGTCAAGCAACCAAGCATAAATGACCGAACTCATAAAACTGGAGGCTTAGAAGGGATTGCAAATGTCAAAATGATAGAATTTGGTACAATGTAGATGTTTAAACTGGAGTTTCATGTGTTTccgaatttaaaaaaaatctacattgTCACAGACTTGGCATATTTTGTCAAATTTAACAGATGATATGGTAAAGATGGACATGAAAACGTCCTCAACTAAGTAATAACTAATTGTGGTTTATGTTTGCATGTCTCTGCCATTACTATTACAGTAGTAACACTGTGAAGCTACCAACTTTAATCATATGAAATACAAATTTTGTTAAACGTATTTGGCAAATTctgatttaaattaaaatttacAAATGAAGGCTACTACACTCATAGTTGattatgttgttattattaaacaTCCATACTGTTTTGCAGTTAAATTAAAAACTGCTTAGAGTAAATTCTAATTTAAGTTATGACCACATTAAGGGTAATTTGAACATTTAAGCAAATGCAGCCTAGATGTTATGAGCCTGTAAATAACCTTTGTCTTTTATACAAAATATACTAGGACTATAGCACACACTTGTGACTATTATTGAAAAGGTGAGGATGCCTCACATATTCGGTTTATTAAATCACAAAAGAGGTAGTCCTCTTTCTTGTTTGGCCTTCTTGCTGCAAATGAGGACCTGGAATGATTCAGGGCGCAGGTCTGTCAGTCATTTTTGGAAACCTTCGCTTTATTGGCCTTCAACCCTCAATCATTTTCGGAAATGCATCGGGTTAAAGGTTGATAAACATGAGCGTCCATTACAATCATGACGGAATTAGACCAGTTCTGGGCATGTCTACTATTTTGCAGCACTTAATGTCAAGTGGGCCCCTTGCTTTGTCTCTGCCTAGGATCCACTGCAGGTGACGTCAGCATAACAATGTGGAAAAGGATTTTTTTCCgctttttattttaagaaaaggATGACAATTCCGCCAGCTACTGTCTTTggaaatacgtttttttttcaccttaaATCTCGAACATTCAGTCCGTCGTGTAGATTTAAATAAAAGCAACAGATAAAAGAATTTGTCTGAACTGGGCTTGCTAAAAGACAGCGCTCTGATAGAATCAGAGCCACGTTAAAGCGAGGAAACGTGCAGAAATATGTTCTGCACTAGAGGAGCGTGCAGAGCTTGACGCTGCTGTCCTCACAGCACCCCAAAGTAAGAAAGTTGATCAGAGTTTCCCAAGAACAGTGGAGTCTGTCCACTGCTGTTTGTGACGTTTcataatttacattttacataacTTCTGTGCTAGGCTGCAAGACGCATGATTAGTGCAAAAGACGCACTTTTGAtgattattaatttattaaagCTTATAGTTCACGTTGGACTCAAAGGTAACAGTACATCCTGTTTTGCAGTATTCCTCAATGACACTGCTGGAAAATGATCTGAAATAACTTTTTCCAATAACATAATTATGATATGTTGGTTTTCCGGTGTCATAGAACTACTTGTTGCTTtatgaaagttttatttttctttggacATGAGGCCAACAAGTAATTTTGTTCccttaaaaaaatgcatttactATCAAAGTAAAGTGTAATGCAAAGATACTCTTACCTCCATGAGAGCTCAGTCAACTATATATTACATATAGCCAACAAATACACCCTTTAACTTTATTGTCGTGCAGGCTATGAAGCACACAAGCATTATGGGctattttaaataatttcaaacaactgaaataattgttAGAATTTGTTTCCTGTGACTTTATATCGTTTTGAAATGTGGCACACCACTCAAATTGAAAGTCTTGACAATAATTGGCCTGGACACGCTATGGCCACTCTCTATTATTCTTGCAGGGCAGGAGTGGGACATTTGCTTTGGCAAGATTTCCAGCGATATAAAGGACGGTAGATAGTCTTGTGTTTTGCTCATGTCTGCATTTAATCACTTGATCAGATGATTAGTATAACACATaaacctttacatttttttcacatgtagAGATTTAGAGAAGGGGTCTTATGAGAAGGCGCCTGAAGTTAAAGAGGCAGCAATATCTGCATCTATCGCGGCATATTTCAAAGCATTTTCTCTGCGATATTTGAAAACGGAGTCGTGCAGTGAACGCCTGCGTGTCCCTTTTAAAACAAACCCAGCGCCTGTCAATCACAGCGCATTCCAACCAATCCCAAAGCTCCCTTTTTAAAAGCAGGTTTGCCTGCTGTGCTTTTATATTGCACCATGGCCTGTTTCGAAGCATTTTTACTACCACGGTTATTGCCACAAATCAAGAGGGCAAAGTGAACGGCATGGGACTCACACCAACTTTAACGAAATTGAGTCTGGTTCCTACTTCTGCGAAGTTCACAGCCACGAATTTCACATGCAGATGATACACAAACAGGGAAAATGGAAAGAGGATTTCTAGGTGAATCCTGAGTGCTGAATTCGGTTGATTTTGCAAACTCATAGCcaaaccaacaacaaaaaatgacaaGCCTTTCGAGGTTTAGTGGCTGCCCTCTCTCTTGCGTCAACCCCGGGGAGAGCAATACTGAACCCAGCGTGGTGCTGCCACCTTTGGCAGGGGAGCACATGGGACTCCCCACTGGCAGTTCCTTAAAACTCTGCCCCTCGCACAATTTGCGAGACTACCCCGAGACGAGGTCCAGTGCATATGTTGACCATTCGTTTCCCAATTCTTCAGACTCTGGATACCCCAGTCACCGCTTAGAGCACAGCCCTAGGGGCATTATCATTGGAGCCAATCTTTCTGGAGCCGGCATGCCACCCGTCACTGATCAACTGGCATCAAGAGCTAACCAACATGGCGGGATTGGAAGGTATCGTGACTTTCCTGGCTACAGAGACAACAGAAGCCATGCTTTTTTCTCAAGTTATCAGGAGCAGGCCCACGCCTCCGCCGACGCATCTCGAGATTTTGGCAGCCAGATGATGCTGGGTATACCTGGCGACCTCCTCGGCCGGACGCACCCTTATGGCCAAACTATCAACCCCAAGGGAAACAGCCAGCAACTTGTCTCACAATTCCTGGGTCTGTACAAACCCCTCAACATGGCAATTCAGCGTGGAGGCGGCGACGCTTTCCTCAGGTGCTCTAAACAAACAGTGAAGCATGAGCTGGTGTGCAAGTGGAGTGACGGCCAAGAGGGGGCTGGGAAGCTGTCTTGCTCCAGAGCCTTCGGGACCATGTATGAACTTGTCACCCATGTAACAGTGGAGCATGTCGGAGGACCAGATCACTCTGAATATGTGTGTCACTGGGAGAATTGTGCGAGAGACAGGAAGCCTTTCAAAGCCAAATACAAGCTGGTGAACCACGTCAGAGTCCACACAGGGGAAAAGCCCTTTCCCTGCCCCTTTCACGGCTGTGAGAAAGTTTTTGCAAGATCAGAAAACCTAAAGATCCACAAGAGGACTCACACAGGTGAAAAACCTTTTAAATGTGAGTTCGAGGGCTGCAACCGGAGGTTTGCGAACAGCAGCGACAGAAAGAAGCATTCTCACGTGCACTCCAGTGACAAACCCTACATGTGCAAGGTCAGGGGCTGCGACAAGTGTTACACCCACCCAAGCTCCCTGCGCAAGCATATGAAGCTCCACTGCAACAAGACCCACGTCGCCGAAAGCGATGACGCGCGTCCCGGGGACGGGGGTCACATTGCGGAGGCCAGGTCATCCCGAGTCCCCGATGGAGCCCATATCAGCCCTCCTCACCCCCCCACCTCAACTCAAGAAGTCCCCCTGTCCCCAGAGAGTCGAGATGATTCGACCTCGAGGTCACGTTTCCATCACACGTTTGACAGCAGTTTGGACTACTCCACACACAGGTCACAGCCCCTCTTGGACCCTTTGTTGCTACAAAGAGGCAGCTACAGGTCCCAGTCCTCCCAGTACCCCTGCGGCCAGACAGGTCACACTTTTGCCCAGAGCTCAAGGACTTTCCCCACCACGTCTCCCTTTCAGAAAAGTATTGTCAACGGATGGTACACATGCCACAGCGGCGTGGACTCCTTCCCACCAAAGCAATGTAACAACATCCCGTCTTTGTGAGTTCCTGTTAGGACACATGCGGGCGACCTACCCTATTTTTCGGGCCTATTTTTCATGTTATAGCCTAAAAAAACGTACAGCTGTATCTATATTACTCTctgaatttttgtgaatgtagtATCAAATATTTTGTGACACGTCCTGAGTCATCCTATTGAAATATTGCATTGTGCAATGTGGGCGAGCtttatgtgttgttgtgaggCCTGTTTGGGTTTGGCTTGTAGCCACATCTCTCCCACAGTGGGTTATAGGAACTTTTACAAAGTTGATATGCCTAATTGTTCGCTGTGTTACGTAATTATTAAAGATATCTATCTTaagtgagacaaaaaaaattataaaggaTTTTAATGGAAAGCTGCGTGTTAAGTCTTCTGAGCTTAGACTGGAAGAAGACGTCTTGCTGAATGTAGCCCTTCATTAAGTGTAGGGGTCTCTGTTGAATGTAAACTAGATGTAATGTATGCCGGAGAGATAGAAACATTATTCATGTCTTTATGTATGTCGCAAGATGAAATAAATATCAGAAAGATATTTTCTCAAGTTACGTTTTGAGCCTGCGTGATGGGCCCGAAGCATGATTTGTCTGTAATTAAAATACTGCGAGGCTCAGtaggttttttttccctcaactTGATTAAGTTCCACTTTTCGTCCCCTTTTCATTACACTTTCGTATTCTTGtttgtattatatgtatatttcaCATTTCTGTGCAAAGTAAGACCAGTGTGAGCATAAACCAGTGTTCGTGATACTATTAAAAACGTTTAATTAGCATACAGTTCTACTGTACATAAGcctatactgtataattaatgtattctatattttattaaagTGTCTATATTCTCTTTGA

Function

NR:

description
PREDICTED: zinc finger protein ZIC 1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K09227 ZICN; zinc finger protein ZIC, invertebrate

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812938.1 True 6805 mRNA 0.41 2 24322057 24330760

Neighbor

gene id symbol gene type direction distance location
f9a NA coding downstream 230827 24083304 ~ 24091230 (-)
arr3b NA coding downstream 421757 23894595 ~ 23900300 (-)
stard14 NA coding downstream 438600 23879061 ~ 23883457 (-)
gdpd2 NA coding downstream 453301 23858022 ~ 23868756 (-)
dlg3 dlg3,LOC106611741,LOC102786504 coding downstream 465766 23770291 ~ 23856291 (-)
LOC120566938 tm9sf2 coding upstream 77916 24408676 ~ 24418311 (-)
cd40lg NA coding upstream 124045 24454805 ~ 24457209 (-)
tmtops3a LOC103376588,LOC104957983,LOC101471053,LOC102197526,LOC102311316 coding upstream 128337 24459097 ~ 24465511 (-)
vgll1 NA coding upstream 142415 24473175 ~ 24476728 (-)
adgrg4a NA coding upstream 146805 24477565 ~ 24490143 (-)
G107667 NA non-coding downstream 62711 24199499 ~ 24259346 (-)
G107610 NA non-coding downstream 529555 23792054 ~ 23792502 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding downstream 1058158 23242037 ~ 23263899 (-)
G107282 NA non-coding downstream 1097601 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding downstream 1140340 23179692 ~ 23181717 (-)
G107742 NA non-coding upstream 101241 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding upstream 117361 24448121 ~ 24450769 (-)
G107759 NA non-coding upstream 138189 24468949 ~ 24469187 (-)
G107764 map7d3 non-coding upstream 166576 24497336 ~ 24514238 (-)
G107765 NA non-coding upstream 192363 24523123 ~ 24524589 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 333156 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 1134999 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 1145031 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 1187272 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 1328828 22990987 ~ 22993229 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 242681 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 531210 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 932412 25263172 ~ 25264864 (-)
G107989 NA other upstream 948843 25279603 ~ 25288086 (-)
diaph2 NA other upstream 1506570 25837330 ~ 26258199 (-)

Expression


Co-expression Network