simc1


Basic Information

Item Value
gene id simc1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 18935651 ~ 18951533 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812973.1
gaaatatgcacacaaaaaacaggAAGTATCACATTTCAGATGTGCCAGTGACAGTTGAACCGAAGATTTTCTACAActtctagctagctatatcGCTTCATACCCGTCTCTGGTTGAATCAAACATAAGGACGTCATGTTACGGATGTTGTTTTTCCGATGTAACAATAGTTTAGCTAGTTGTAAGATAGCTTACGACAGTTAACTTGCGGCGTCCCGTGAATTATGAAGATACAATCATCTTCAAAGCCAAAATATTACCCAACATTAGGTGTTGAAGTTTCTGTCTCGTAGGAGAAATGGATGATGTGATCAGTCTCAGCTCCGACAGTAATGACTCTGATGTGGAAATCATCGGCTCCTTCTGTAACGTTATGACCAAAAGTGATCCACTGCCCCTCACAGCAGTGCGAGTTGACGTTGATGCCGTCAACGTCAACGTTCCAACGCTTTATATTGACCTCACAAACCCTAGATGGACTCTTCCAGAGCTGAAGATGTGCAAAAGACAAAATGCCAGTGTCTTGACAGTGGTAGACTTGACTGAGACCGACATAGAACATGGGACAAATCAGGAAACAGAGAATTTGCCACCAGATGACTCTCAAGTGAAAAAAGcacaaagtacaaataaaaatcaaacTTCAAACAAACAAGATTTAAAGTTACAGAAAAGCTCTTCAAGAGGCCCAACTGATTTTGCACCACAGCAGGACTGTGGCAATTCAAAGCCGAAGCAGAGATGTTTGGCTTCTCAAACACAATACGAAAAGCAGAAGGTTAAAGCACGTCTTCATGCAGCAATTGTAAAATTAAGACGATTGCCTTTTCTTGAAACTCATGTCGCAGAACTGAGGAAGTCAAGGTGTTCTGTCTATTTAAACAAAGATGGTACACAAATGTCACTGCACCCTAGTCAACCAGATAATAACACTGAAGCACCGGAATGCATTAGTAATTTGAGTAGAACTACCACATCAAATGGTCCTCCCATGGATCACTCACTGGATGAGTCTTCTCCTAAGGTGGTTGAATCTCTTGTCAGACAGGAAGAACAAGAGAACAGTAATGAATTTACAAACGCACAGTTAAATGCTAAAATATCTCCGCGTCTAAGGAGCCCAGCTGACTCTCCCCCTAAAGAGGTCTCTGTTGCAACCTCAAAGACGCACATCACTCGTGAAGAAGAGAGGGATGACGTTTGCTTATCCACGCTCATCCCCTCTCCAACATCACCGTCTTCATCTCAAGATAAAGCGCAGGGTTCTTTACATAAAGAAGTCCTCTGCTCCACACTGGAACAACTGGAATTAGACAAAGCAGATCTCTCTGATCCCTCATTCCCCCACTCTCCTACCACTGGACCAAACCCTTCTGAGCCTATTGGCCTTGACTCTATGTCTCACCAAGTCGACCCGACACCCACTTCTGAGCATACACTAGCAGAGAGTACATCTGAATGGCAGTTGGAGGAGGTTAAGGCTCATGAGCCGTCAAACAGCTCTGACTTCTTCTTTCTCCCTAGTGAACCTCCTTTGTCAACTGAGAACATGGATGACAGATCTGGGGCCGGGACAGACAGAGGGGATCTGGGCATTGACAGTCCAGTGTCTTTTCTTTGGCAAGAAGAGGGGAGTGATGGAGACGAAGACAGCAAAGAGAGCAGATTTGATATAGACTTCAGGGCGGCCAGTAGGGAGGACAGGCAATTTGTGTGCCCAGTTACACTCAAGAAAATAATGTCTGGACCAGCTCAAGCCCTGCTTGATGGGGAAGATGAAGATTTTGGAACTCCAGAGGTGCTTTGCCGTCAGAGTCTGAGCCTGGTTTACAGTACCATCGATGAGAACTACCCAGAGGGCACTTTGGAGCTTTTGTCTGACCTGCTACAGCCTGGTTACTATCCCCCCAGAGATATCACCTCCCACCTGCTGCGTGGCATTCTGCTCAACCCACAGTGTCCTTATCACCTGTGCGTGCAGGCTTTTAATCTGCTGATGAGGACACAGAGACTCCACATGGCTGATAAAACCACAGTTCCATGGGAATGGGAGTTGTTGACCTCAGTCACGTTCAATCAGGACCATACAAAGAGACATCGATGTGAGGTTGTGCGAATGCTCTTGGACTATGTCGTGCAGACTTTGGAGGATGACTTCCAGGCCAACCGCTCTATCTCTACCCTCCACCACTCCATCGCCAAGGCAACATTGTCATGTGATCAGCAGTTCCCTCACGTCAGGGATGTCATCAAGTGGCTCTTTTTTGCCATTATAAAATCAACAGAGCATGGGGAGAGTAAAGAagcagccagagagagagatgaacacAACAGAATGGTGTCCATCTTCCAGAGGATGCTGTCCTTGGCTCTGGAGGTGGACCGTTCTCCAGCTCTAAACTCTGCCAAGCTGTCCCAGGAGCTCTTCCATATGCTCATCAGCGATGTACCTTTACGAGCACACagGATGTTGTTACTGGAGAGCCTGCAGAGCATGCTGCTGAGATGTAAGCTGTTGGAACATCTGTTAGATTATGCATGCCCACTGAAAATCTCTCTGCCCATGTCGCTCAGTCTTCTGCTTCACTTTTTGAAGAACTGCACTCTGGCACCAGACCCTTCGGATGGTACTGAAAGGTGGCAGAGGTGGGAAGAGTTGGTCCATCTTCTCTGGATGTTGCTGCTCAGTTACAACAAAGCGATGAAAGGCTATCTGTGCAACTCAGTCTCTGAACAAAGAGGCGGAGTTGGCAACTTGGTCTACAAGCCGGATGATATGGTATCCAAGCCTGCCATTTGTGAAGCAGTGGAGGCTTTTCTGTCCAGATCCCAGGCTGACCTCGGCCAAGCCTTACCTCTCCATGTGGAAGAGTCCCTCACTTATCTACAGGATCATCTGCTAGATGTCTGTCAGTgttgaattgaaaaaaacttttcttgAATAAAGAAAGCATTAGCTATAAAGCATTGTactaattatatttatatttttgtatgaGTTGACTtgttaaatgtttgtgtttgtgtaaagtTCATTGTGGGGTCTAATGGAATTAAACAATATTTACATTTGGCTTCTCTTAATTATTTAAACTGTCAAAGGGCCTCcatgaggaccacaatggaaataagcctTCAggatttattgtgtttttatccctgttgatttttttaatgttggcTTATGTAATTACTGCTGTGCagtgttatttgtgtttttaaatcaaataaatgaatcaaagAAACAAGA
>XM_039812974.1
agaaatatgcacacaaaaaacaggAAGTATCACATTTCAGATGTGCCAGTGACAGTTGAACCGAAGATTTTCTACAActtctagctagctatatcGCTTCATACCCGTCTCTGGTTGAATCAAACATAAGGACGTCATGTTACGGATGTTGTTTTTCCGATGTAACAATAGTTTAGCTAGTTGTAAGATAGCTTACGACAGTTAACTTGCGGCGTCCCGTGAATTATGAAGATACAATCATCTTCAAAGCCAAAATATTACCCAACATTAGGTGTTGAAGTTTCTGTCTCGTAGGAGAAATGGATGATGTGATCAGTCTCAGCTCCGACAGTAATGACTCTGATGTGGAAATCATCGGCTCCTTCTGTAACGTTATGACCAAAAGTGATCCACTGCCCCTCACAGCAGTGCGAGTTGACGTTGATGCCGTCAACGTCAACGTTCCAACGCTTTATATTGACCTCACAAACCCTAGATGGACTCTTCCAGAGCTGAAGATGTGCAAAAGACAAAATGCCAGTGTCTTGACAGTGGTAGACTTGACTGAGACCGACATAGAACATGGGACAAATCAGGAAACAGAGAATTTGCCACCAGATGACTCTCAAGTGAAAAAAGcacaaagtacaaataaaaatcaaacTTCAAACAAACAAGATTTAAAGTTACAGAAAAGCTCTTCAAGAGGCCCAACTGATTTTGCACCACAGCAGGACTGTGGCAATTCAAAGCCGAAGCAGAGATGTTTGGCTTCTCAAACACAATACGAAAAGCAGAAGGTTAAAGCACGTCTTCATGCAGCAATTGTAAAATTAAGACGATTGCCTTTTCTTGAAACTCATGTCGCAGAACTGAGGAAGTCAAGGTGTTCTGTCTATTTAAACAAAGATGGTACACAAATGTCACTGCACCCTAGTCAACCAGATAATAACACTGAAGCACCGGAATGCATTAGTAATTTGAGTAGAACTACCACATCAAATGGTCCTCCCATGGATCACTCACTGGATGAGTCTTCTCCTAAGGTGGTTGAATCTCTTGTCAGACAGGAAGAACAAGAGAACAGTAATGAATTTACAAACGCACAGTTAAATGCTAAAATATCTCCGCGTCTAAGGAGCCCAGCTGACTCTCCCCCTAAAGAGGTCTCTGTTGCAACCTCAAAGACGCACATCACTCGTGAAGAAGAGAGGGATGACGTTTGCTTATCCACGCTCATCCCCTCTCCAACATCACCGTCTTCATCTCAAGATAAAGCGCAGGGTTCTTTACATAAAGAAGTCCTCTGCTCCACACTGGAACAACTGGAATTAGACAAAGCAGATCTCTCTGATCCCTCATTCCCCCACTCTCCTACCACTGGACCAAACCCTTCTGAGCCTATTGGCCTTGACTCTATGTCTCACCAAGTCGACCCGACACCCACTTCTGAGCATACACTAGCAGAGAGTACATCTGAATGGCAGTTGGAGGAGGTTAAGGCTCATGAGCCGTCAAACAGCTCTGACTTCTTCTTTCTCCCTAGTGAACCTCCTTTGTCAACTGAGAACATGGATGACAGATCTGGGGCCGGGACAGACAGAGGGGATCTGGGCATTGACAGTCCAGTGTCTTTTCTTTGGCAAGAAGAGGGGAGTGATGGAGACGAAGACAGCAAAGAGAGCAGATTTGATATAGACTTCAGGGCGGCCAGTAGGGAGGACAGGCAATTTGTGTGCCCAGTTACACTCAAGAAAATAATGTCTGGACCAGCTCAAGCCCTGCTTGATGGGGAAGATGAAGATTTTGGAACTCCAGAGGTGCTTTGCCGTCAGAGTCTGAGCCTGGTTTACAGTACCATCGATGAGAACTACCCAGAGGGCACTTTGGAGCTTTTGTCTGACCTGCTACAGCCTGGTTACTATCCCCCCAGAGATATCACCTCCCACCTGCTGCGTGGCATTCTGCTCAACCCACAGTGTCCTTATCACCTGTGCGTGCAGGCTTTTAATCTGCTGATGAGGACACAGAGACTCCACATGGCTGATAAAACCACAGTTCCATGGGAATGGGAGTTGTTGACCTCAGTCACGTTCAATCAGGACCATACAAAGAGACATCGATGTGAGGTTGTGCGAATGCTCTTGGACTATGTCGTGCAGACTTTGGAGGATGACTTCCAGGCCAACCGCTCTATCTCTACCCTCCACCACTCCATCGCCAAGGCAACATTGTCATGTGATCAGCAGTTCCCTCACGTCAGGGATGTCATCAAGTGGCTCTTTTTTGCCATTATAAAATCAACAGAGCATGGGGAGAGTAAAGAagcagccagagagagagatgaacacAACAGAATGGTGTCCATCTTCCAGAGGATGCTGTCCTTGGCTCTGGAGGTGGACCGTTCTCCAGCTCTAAACTCTGCCAAGCTGTCCCAGGAGCTCTTCCATATGCTCATCAGCGATGTACCTTTACGAGCACACagGATGTTGTTACTGGAGAGCCTGCAGAGCATGCTGCTGAGATGATGGTACTGAAAGGTGGCAGAGGTGGGAAGAGTTGGTCCATCTTCTCTGGATGTTGCTGCTCAGTTACAACAAAGCGATGAAAG

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812973.1 True 3250 mRNA 0.45 10 18935651 18951532
XM_039812974.1 False 2593 mRNA 0.46 9 18938218 18951533

Neighbor

gene id symbol gene type direction distance location
cnot6a cnot6 coding downstream 1212 18915363 ~ 18934439 (-)
LOC120566918 LOC103354394 coding downstream 27356 18706095 ~ 18908295 (-)
si:dkeyp-72g9.4 NA coding downstream 233848 18699424 ~ 18701803 (-)
LOC120566255 NA coding downstream 249219 18685048 ~ 18686432 (-)
LOC120566256 NA coding downstream 256399 18677831 ~ 18679252 (-)
slc34a1b LOC102798292 coding upstream 50979 19002512 ~ 19015339 (-)
LOC120566723 LOC103354395,LOC101073614 coding upstream 107744 19059277 ~ 19068071 (-)
rbm22 rbm22,LOC102796909 coding upstream 122449 19073982 ~ 19079321 (-)
slc35a4 slc35a4 coding upstream 192176 19143709 ~ 19145147 (-)
LOC120567311 NA coding upstream 193705 19145238 ~ 19147027 (-)
G106057 NA non-coding downstream 206619 18710042 ~ 18729032 (-)
G105967 LOC100708117 non-coding downstream 383967 18550110 ~ 18551684 (-)
G105835 NA non-coding downstream 899894 18035382 ~ 18035757 (-)
G105834 c1qtnf2,LOC103471225 non-coding downstream 900403 18033407 ~ 18035248 (-)
G105827 LOC108238064 non-coding downstream 911755 18022437 ~ 18023896 (-)
G106066 NA non-coding upstream 47007 18998540 ~ 18999875 (-)
G106068 NA non-coding upstream 50239 19001772 ~ 19002114 (-)
G106073 NA non-coding upstream 95731 19047264 ~ 19047863 (-)
G106074 LOC103135527,LOC103354384,LOC104927064,LOC106905160,LOC100709097,LOC107094991,LOC102235273,LOC106517448 non-coding upstream 97841 19049374 ~ 19055694 (-)
G106084 NA non-coding upstream 119315 19070848 ~ 19071183 (-)
LOC120566257 NA other downstream 244241 18687788 ~ 18691410 (-)
reep2 reep2,LOC102782871 other downstream 621236 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 867159 18067425 ~ 18068492 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other downstream 940301 17987196 ~ 17995350 (-)
LOC120566288 NA other downstream 1075896 17857084 ~ 17859755 (-)
rgs14b rgs14 other upstream 66219 19017752 ~ 19044951 (-)
LOC120566717 LOC102215832 other upstream 264456 19215989 ~ 19250436 (-)
tomm5 NA other upstream 484306 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 526397 19477930 ~ 19482625 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 1020300 19971833 ~ 19981633 (-)

Expression


Co-expression Network