LOC120566486


Basic Information

Item Value
gene id LOC120566486
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19741886 ~ 19751707 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812992.1
AACAGAGCCTCATTCGCCGATGCTGGATCACCCACAGGTGTTACATTTGGaatacaacaacaaaaatgggGGCAGAGCAGAGCACCCTGGCACAGAATGGCTATGTCCtacaaaaagaaacagaaagtgGTTCTGTTTACACAAAGGGAGATGACACATTTCTCATTAAAAAGATCATTTTAGATCAGACTACCGGAAAGGCTGATCCAGCATTAACTTCAGAGATAGAAATCCTCAAGACAACAAGCCATCCTCACATTGTGAACAGCAAAAACTCTTTCAAAGATAAAGATGAGAAGACTAACTATGTTGTGATGGACTACTGTCAGGGAGGGAGCCTTGCTGCAAAGATCACAGAGATGAGTGACTCTCCGAAGGAGTTTGAGGTACTGAGCTGGATTGTTGAGATCTGTATGGCTTTGAGAATCATTCATGAAAAAGGCTTGCTTCACAAACATCTGACACCAGAGaaCATACTCCTCACAGAATTTGGTATAGTGTGCCTGGACGGATTTGGAAAAATCCATGAAAATTCAAAAAACCCTGCAGCAAATccaatggaaaaaataaattatctGCCACCGGAAGTCTTCGTAAATGGGACCTATGATGCTAAAAGTGACATTTGGTCAGTGGGTTGCATACTCTATGAGCTCTGTACTCGACAATTGGCAttCTCAGCAGAGACTACGATCAAGATGATGCCCAAGATAATTAATGGTCCTTACCCATCTCTCACAGAGCCATTTTCACCAGAGCTTTGTGAACTATTGAAtgatatattaaataaagacCCTCAATCAAGACCAACAGCCAGTGAGATCCTGGAGCGTCCTTTTATTGTAAACTGTCTCTCAGAAAAGTGCAAAACAACTGTGAAGGAACTCCAGACCAAGCTGGACAAGCTAAGGGAAGTGGCTGACGGTTTGGAACGTGTGCATGAAGGCACCACCATCGGCAGTCTGGCAGGTGGAGTGATTGGAGCGGTGGGAGGGATTACATCCATAGTGGGCCTTGTACTGGCTCCCTTCACTTTGGGAGCCTCTCTTATTGTCACTGGGGTTGGAGTAGGAGTGAGTGTGGCTGGTGGGGTCACTGCTGGTGCCTCGAATATCACTAATATGGTCAACCAGTCTTCTGATCGCAAAGCTGTTCGAAGCATCATAAAAGAGCTTGAACAGAAAGTTATTGCAGTTACCACCTGGCTCCAGGAGATTGGATGTGAATCAGTTGACATAACTGACAATGAGAATAGTGAGTTAAATGAAGACAACGTGTTACGGCTTGGCTGCAGGGCAGCGAAGTGCCTGGGTGGCATTTCTGAAGCGGTGCGACTAGGTAGAGTGCTGACCATTGGCAAAACTGTAGCACAAACATCCAGGGTAGTACGCGTGGCAGAGGTAGCAACAGGTGTGTTCTCTGGCTTATTTGTGGCAGTGGATGGTTTCTTTATTGCCATGGATGCAAAAGAGTTACACCACATCAGACAGGCAAAGGCAATAGAGGAAAAAGGTAGAGATGTGTCTGACAAGTCTGACAAATCAGAGGCACAGAACCAGCCTTCCCAAAATACCACTCCAATCAGATCTGAGATCATGAAATTTGTTCATTCAATCAGGCAGGCAGCTGACCAGTTGCAGAAAATCTTGGATGAGCTGAAAAGCAGCATCAATGTAACCCAAGGGTTACATTAAACAAACTCAAAAgcacattaaaggtgctctaagcgatgctgaaattactattcaaatatgattttatttataaataagttggctaacgttatctaatctccctcttctcatgtcacatctgatgaacaataagttacaggagtgagaaacacaaggcattgtgagctaCCGTTACGTACCGAGTATTGTGAGCAGTGATGCCGgtaacatcgcttagagcacctttaagttaaaGTGTCGGTACACTCAGTAGAAAACTCTGATTGCGTTGACACCTAACTGTTTGCTCCGTGCTATGCCCCCACCTGATACAATATATCAGTTGCCATTATATTGTTGTGCAACGCTACATCACACTTGGATTTTAAAAGTCAGACTACACCTGACCACAATTAAATCTCATGGTTGTTAAGGTCAGAAATGTAACAAGGGGCATTTTTACCCAGAGAAGTCACTTAAGCAATAATGATTGTCTCTAAGAAGTGTAAAGTTGcttttagggatgcaccgaaatgaaaattcttggccgaaaccgaaaaccgaaaaagaggaaaccaagaccgaaaaccgaaacaccgaaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812992.1 True 2277 mRNA 0.43 10 19741886 19751707

Neighbor

gene id symbol gene type direction distance location
LOC120566528 NA coding downstream 14595 19723502 ~ 19727291 (-)
spock1 spock1,LOC102785053 coding downstream 43117 19598361 ~ 19698769 (-)
dele1 kiaa0141 coding downstream 164040 19569535 ~ 19577846 (-)
LOC120566455 LOC100699740 coding downstream 172789 19528422 ~ 19569097 (-)
slc25a51b slc25a51 coding downstream 272478 19464471 ~ 19469408 (-)
LOC120566601 diaph1 coding upstream 834275 20585982 ~ 20699203 (-)
LOC120566290 LOC104961544 coding upstream 949835 20701542 ~ 20703679 (-)
trpc7b trpc7,LOC101475915,LOC100711831,LOC102778756 coding upstream 964120 20715827 ~ 20770031 (-)
dock2 NA coding upstream 1062771 20814478 ~ 20834647 (-)
LOC120567463 dock2 coding upstream 1121150 20872857 ~ 20924459 (-)
G106303 NA non-coding downstream 184314 19477168 ~ 19557572 (-)
G106259 NA non-coding downstream 291762 19340494 ~ 19450124 (-)
G106276 NA non-coding downstream 345892 19394810 ~ 19395994 (-)
G106248 NA non-coding downstream 420580 19320263 ~ 19321306 (-)
G106243 NA non-coding downstream 427470 19312809 ~ 19314416 (-)
G106349 NA non-coding upstream 105389 19857096 ~ 19857367 (-)
G106378 LOC108242387 non-coding upstream 193948 19945655 ~ 20052690 (-)
G106367 NA non-coding upstream 210247 19961954 ~ 20007579 (-)
G106375 NA non-coding upstream 288390 20040097 ~ 20055141 (-)
G106414 LOC103375287 non-coding upstream 328339 20080046 ~ 20092084 (-)
tlr1 LOC104951710,LOC102197886 other downstream 259261 19477930 ~ 19482625 (-)
tomm5 NA other downstream 304959 19435839 ~ 19436927 (-)
LOC120566717 LOC102215832 other downstream 491450 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 696935 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 1050476 18687788 ~ 18691410 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 220126 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 479201 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 1324050 21075757 ~ 21110067 (-)
G106728 mif other upstream 1376131 21127838 ~ 21130970 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other upstream 1427145 21178852 ~ 21187653 (-)

Expression


Co-expression Network