sowahab


Basic Information

Item Value
gene id sowahab
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17870202 ~ 17871569 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813049.1
ATGGCTTTGACCCAAGAatctcttttgtcttttttactgGAGCACGGAGGCAAAGTGAAGAACTCGGAGCTATTAAACAACTTCAGGAGTCTAATCAGCTGCAGCGATCCCGCGGAAAAGCAGCACAATAGGGACCTTTTCAAGAAGTTGGTGAACAGCGTCGCTGTGGTCAAACAGATCGACGAGGTAAAGTTTGTGGTTGTGAAGAAAAGGTATCAGGACTTTGTTAAAGAGGTGGCGCAGGATGCCTCGCAGATGGAGGACAGTTTCTCAAGCCTAAATACGAGCTTTTCGTACACATCTCCTCATCGAGCCGAGTCAGACAGGGTGATTTATTCGGATATTGAGAACAATAATATAAGCTGTCCCTCAAACATACATGGCAACTATTATGGTGATGCCAAACATAAGTCTGTGGGGGCTATGCTGGAAAGGAGCCCGTTACCAAGAAACATAAGTTGTGCGGACGAAACTACTGTTAAAGTCCTGAATATCTCCGGAGATCGGGCGAGCAGAGCGAGGAAATCTGGAGCTGTGTTCGCTGTCATAGCAGTGAAATCCCCTCCCAGAGACTCTGCACCAGCAACACAGGATGGATTACATTCCCAAGTGCATCCGCATAAAACCTCGGACAAACCAATCACGTTGGTAACAAAAGTTTCTACACCATCTATGCCGACTCTGAATCCTAACTTTCCAGCTTGTGCAAAAAGAGACTCCCAGTGttggaaagacagacagacagaggacatGCAACCGCCAGGCTTTCCCCTGCTGAGGCCCCAAAACAAGAGAGATGATGCAAAGTACTCAGAGTCTGTGCCTTTGGAGCCTTTAGCTCATGAGTGGCTGGTAAAGTGTGCTGCTGGACTGTGGGGACAGATCCACGGTTTGCTGCTGCAGGACACAAGGTTAGCACAGAAGAAAGACTTCATGTCAGGTTTCACAGCCCTGCACTGGGCTGCCAAGAACGGCAACAGCGAGATGATACACAAGCTTGTGAATATCTCCAGGAAAAGAGGCACCTGTGTTAACATCAACAGCAAAGCACACGGAGGATACACACCTTTACACATCGCAGCAATGCACGGCCACACTGAAGTAATGGTTTTGCTTGTGCAAGGTTACGGAGCCAATGTGAATGAAAGAGATAATGGTGGCAGGAAGGCCTTCCACTACCTGGGCAAAGGTGTGTCAGCTGAGGTCAGAGCACTTATGGGAGGACTGCAGCAGAACAACTACAGGGAGAAGACAGAAGACGAAGAATACAGAGAGCACCCGAAAGGCTTCAACACAATTAGTAAACTCTTCCAGCCTCATGTAGGGAAGAAACAAAAGACAACAACTAAGTTTGCTCATGACTGGTGA

Function

NR:

description
ankyrin repeat domain-containing protein SOWAHA-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813049.1 True 1368 mRNA 0.48 1 17870202 17871569

Neighbor

gene id symbol gene type direction distance location
gdf9 gdf9 coding downstream 6048 17860860 ~ 17864154 (-)
hspa4b hspa4 coding downstream 13826 17847776 ~ 17856376 (-)
gnpda1 LOC104943541,LOC104938351,LOC101467942,LOC102791355,LOC102296048 coding downstream 23648 17843883 ~ 17846554 (-)
LOC120566774 LOC104938341,LOC103359140,LOC104943540,LOC100701639 coding downstream 26831 17834717 ~ 17843371 (-)
sh3rf2 LOC104943536 coding downstream 100935 17749663 ~ 17769267 (-)
fbxl3l NA coding upstream 88310 17959879 ~ 17968780 (-)
LOC120567416 LOC104938463,LOC103391208,LOC103359220,LOC100705713,LOC105026079 coding upstream 124406 17995975 ~ 18000829 (-)
LOC120566259 adra1b,LOC104967953 coding upstream 209635 18081204 ~ 18090466 (-)
egr1 egr1 coding upstream 321648 18193217 ~ 18197415 (-)
kdm3b kdm3b coding upstream 444244 18315813 ~ 18343775 (-)
G105759 NA non-coding downstream 39054 17828622 ~ 17831148 (-)
G105749 NA non-coding downstream 114287 17755214 ~ 17755915 (-)
G105597 LOC104923197,LOC104943958 non-coding downstream 534250 17334404 ~ 17335952 (-)
G105598 NA non-coding downstream 545247 17324460 ~ 17324955 (-)
G105578 NA non-coding downstream 716609 17152171 ~ 17153593 (-)
G105768 NA non-coding upstream 3267 17874836 ~ 17876295 (-)
G105769 sept8 non-coding upstream 5463 17877032 ~ 17881994 (-)
G105784 gabrb2,LOC102788768 non-coding upstream 57263 17928832 ~ 17933470 (-)
G105806 atp7a non-coding upstream 106743 17978312 ~ 17980298 (-)
G105820 NA non-coding upstream 143882 18015451 ~ 18015927 (-)
LOC120566288 NA other downstream 10447 17857084 ~ 17859755 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other downstream 74811 17783560 ~ 17795391 (-)
kif3a kif3a other downstream 121655 17668084 ~ 17748547 (-)
nexmifb kiaa2022 other downstream 292391 17522141 ~ 17577811 (-)
frmpd3 frmpd3 other downstream 613270 17166896 ~ 17256932 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other upstream 115627 17987196 ~ 17995350 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other upstream 195856 18067425 ~ 18068492 (-)
reep2 reep2,LOC102782871 other upstream 414389 18285958 ~ 18314415 (-)
LOC120566257 NA other upstream 816219 18687788 ~ 18691410 (-)
rgs14b rgs14 other upstream 1146183 19017752 ~ 19044951 (-)

Expression


Co-expression Network