gfpt2 (LOC108240504,LOC102303939,LOC102210943,LOC106517552)


Basic Information

Item Value
gene id gfpt2
gene name LOC108240504,LOC102303939,LOC102210943,LOC106517552
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 18642492 ~ 18658559 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813051.1
CTCCAGGAAACACCGTTTAAATGAATAGAGGGAGTGTGCAGTCTGGATAGAACACGGCACAGGCAGAAGCATCACTCCAGTCGGGGAAACTACAAGTCGTTTTCTCACAGAAAGGTATCCAGCAACGAAGGCCAAGCTTGAGTCATGTGTGGGATCTTTGCCTATCTGAATTACCGAGTGCCTCGCACCAGAAAGGAGATATTTGAGACGCTGGTGAAGGGACTGCAGCGACTGGAGTACAGAGGGTACGATTCAGCAGGTATCGCTGTCGATGGCCCTAGGAAGACGGCCACTGACATCAACGACAACACCATCTGCTTGATCAAGAAGAAGGGGAAGGTCAAGGCGCTGGATGAGGAGCTTTACAAGAAAGACTCACTGGACCTGGACGAGGAGCTGAGCACACACTTTGGCCTCGCTCACACTCGCTGGGCCACACACGGAGAACCCAGCGCTGTCAACAGCCACCCTCATCGTTCTGACAAGGATAACGAGTTTGTTGTCATCCACAATGGCATCATCACCAACTACAAAGAGCTGAAGGCATACCTGATCACCAAAGGATATGAGTTTGAGTCAGAGACGGACACAGAGGTGATCCCGAAATTGACCAAATATGTTTACGACAACCGAGAGAATGACATCACCTTCTCCACCCTGGTAGAGAGGGTTATTCAGCAGCTGGAGGGGGCCTTCGCTCTGGTGTTTAAAAGTCGTCATTACCCTGGAGAGGCTGTGTCCACCAgACCCAGGCAGAGCAGAGGTTGGATTCAGGTTCCCCCTGCACCTCCTGGGCCTCTGGCCTCTGGGATGCTGGCTCTAGGCCGCCGGCTTCTCTCTCGAGTCCAGGAGAAGAACAGCCATAATCGTCCTGACTGCACCAACAACATTGACTCTGTGGGGGATGGCAGGGCTGTGGAGTATTACTTTGCCTCTGACGCCAGTGCCATCATTGAGCACACCAACAAGGTGTTGTACCTGGAGGATAATGATATAGCAGCGGTGACCGGCGGGAAACTCTCCATCCACAGGATTAACCGACAGGCTGGTGAGGATCCAGTGAGGGCAATCCAGACCCTGCAGATGGAGCTGCAACAGATCATGAAAGGTAACTTTGATGCCTTCATGCAGAAGGAGATCTTTGAGCAGCCGGAGTCAGTAGTCAACACTATGAGAGGACGGATTTGTTTTGAAACCAACACAGTGCTTCTCGGTGGGCTGAAGGACCACCTGAAAGAAATCAAACGTTGCAGACGGCTGATCGTGATTGGCTGCGGCACCAGCTTCCACGCTGCAGTGGCTACCAGACAGATCCTCGAGGAGCTGACGGAGTTGTCTGTCATGGTGGAGCTGGCAAGCGACTTCCTGGACCGCAACACGCCTGTGTTTAGAGACGACGTTTGCTTCTTCATCAGCCAGTCAgGAGAGACAGCCGACACCTTGATGGCACTACGCTACTGCAAGAGCCAAGGTGCTCTGACAGTTGGTATAACCAACACTGTGGGCAGCTCCATTTGTAGAGAAACAGACTGCGGAGTCCACATCAATGCTGGCCCTGAGATAGGAGTGGCTAGCACCAAGGCCTACACCAGTCAGTTTGTGGCCCTCGCCATGTTTGGCCTGATGATGAGCGAGGACAGACTCTCCCTACAGCAGAGAAGACTGGAGATAATCAACAGCCTCAGGGATCTACCTGAGCTGATAAAGAAGGTTTTGGCCCAGGATAAGAAGATCAAGTCCATTGCCGAGGAACTGTACCAGCAAAAGTCTCTTCTGGTGATGGGCCGAGGTTTCCACTACGCTACCTGCCTAGAGGGGGCACTGAAAATCAAGGAAATCACTTACATGCACTCCGAGGGCATCCTGGCTGGGGAGCTGAAGCACGGTCCTCTGGCACTTATAGACAAAGACATGCCGGTCATCATGATCATCATGAGAGACGCCTGCTACACCAAGTGCCAGAATGCTCTGCAACAAGTCACGGCCAGATCGGGTCGGCCCATCATCATTTGTTGCCAGGACGACACTGACATGTGCAAGAATGCCTACCAGACCATCGAGCTGCCGCATACTGTGGACTGTCTGCAGGGCATCCTCAGTGTCATCCCCCTGCAGCTCATGTCCTTCCACTTGGCTGTCCTGCGAGGATATGACGTTGATTTTCCCAGAAACTTGGCCAAATCTGTGACCGTGGAATAATTACAGGTCAAAAGTACAGAAAAGCAGAAAGGAGGCTTATAGATGTACAGTGCAATTgaacgttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcaaatgaAAGAGGGAGGTATATGgtacaataaattaaaaaaagagagagaaatgtgaagTCCACCAAATATACTGCTGAGGAAGTGCTAGTGTCATTGAGGCCTCGCAGAACAATCTATGACAACAACATTCACACATCCAAAGCAACCAACATGCAGTGCCTTTTTCTTATCTCAAGAAGCCAAATACTACAGGCTTAGCAGAAAAGCAATGACATGGTGTATTGAAGTGTTTACAGTTGTGCAATATATGGACCAGATGTGCTTTATGTATGTACAAAATCATAAGTGAGGTGAtttgttctctttctgtttaaTGAATTTCTATTGGGGGCATCTTAACTCTCTTTGTATAACGGGAAATGTAGGAATTAAACAGTTTTATTCCAGAGAGTTCTCTGAAttatgaaattattattatatttttatatttcgcTGCACATTCATGGCATCACTGTGCCTGGTGGGCCACTAGCCAATACAGTCAATATTTTTAGCAGAAGCTACCAGAAGGAAGTTCCTCAATCAGACTTTCACATTATTACTTGATTCttgattttaatttaaaatatattgtaaGTATATTCTGTTTAACAGGATTGCAGTACATGGTAGAACATGAAACTTTCTTTATACTTATTATTGTCATAGTTTGGAGCATTTCCATAGACACACATAATAATTATTTAATGAGCACTtatgcagcaaaaaaaacaatgtgactATCGTGACTTTCACTAATACTTTCGTTTCATCAGCTGTTTGTATGGGTTTATGATAATCATAATATTCTGTATTTATCTGATTCTTATTTTATGGGGGCTTAAGAGAGGGTTTTGATTTATATCTTTAACTGTGATTGTATTTTATACTGTGTTTTAAAGACATAAGCAGGCACTATCAATCAATAAATAGGTAAAGGATTCTA

Function

NR:

description
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like

GO:

id name namespace
GO:0016051 carbohydrate biosynthetic process biological_process
GO:0030246 carbohydrate binding molecular_function
GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity molecular_function

KEGG:

id description
K00820 glmS, GFPT; glutamine---fructose-6-phosphate transaminase (isomerizing)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813051.1 True 3322 mRNA 0.47 19 18642492 18658559

Neighbor

gene id symbol gene type direction distance location
mapk9 mapk9 coding downstream 1684 18620133 ~ 18640808 (-)
LOC120566508 rasgef1c coding downstream 35777 18553669 ~ 18606715 (-)
clk4a LOC103354367,LOC101475428 coding downstream 93777 18539401 ~ 18548715 (-)
col23a1a col23a1,LOC101473796,LOC107101682,LOC107375271,LOC102080853 coding downstream 104039 18415035 ~ 18538453 (-)
rack1 rack1 coding downstream 230016 18408549 ~ 18412476 (-)
LOC120567095 kiaa1191 coding upstream 7505 18666064 ~ 18677366 (-)
LOC120566256 NA coding upstream 19272 18677831 ~ 18679252 (-)
LOC120566255 NA coding upstream 26489 18685048 ~ 18686432 (-)
si:dkeyp-72g9.4 NA coding upstream 40865 18699424 ~ 18701803 (-)
LOC120566918 LOC103354394 coding upstream 47536 18706095 ~ 18908295 (-)
G105967 LOC100708117 non-coding downstream 90808 18550110 ~ 18551684 (-)
G105835 NA non-coding downstream 606735 18035382 ~ 18035757 (-)
G105834 c1qtnf2,LOC103471225 non-coding downstream 607244 18033407 ~ 18035248 (-)
G105827 LOC108238064 non-coding downstream 618596 18022437 ~ 18023896 (-)
G105820 NA non-coding downstream 626565 18015451 ~ 18015927 (-)
G106057 NA non-coding upstream 51483 18710042 ~ 18729032 (-)
G106066 NA non-coding upstream 339981 18998540 ~ 18999875 (-)
G106068 NA non-coding upstream 343213 19001772 ~ 19002114 (-)
G106073 NA non-coding upstream 388705 19047264 ~ 19047863 (-)
G106074 LOC103135527,LOC103354384,LOC104927064,LOC106905160,LOC100709097,LOC107094991,LOC102235273,LOC106517448 non-coding upstream 390815 19049374 ~ 19055694 (-)
reep2 reep2,LOC102782871 other downstream 328077 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 574000 18067425 ~ 18068492 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other downstream 647142 17987196 ~ 17995350 (-)
LOC120566288 NA other downstream 782737 17857084 ~ 17859755 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other downstream 847101 17783560 ~ 17795391 (-)
LOC120566257 NA other upstream 29229 18687788 ~ 18691410 (-)
rgs14b rgs14 other upstream 359193 19017752 ~ 19044951 (-)
LOC120566717 LOC102215832 other upstream 557430 19215989 ~ 19250436 (-)
tomm5 NA other upstream 777280 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 819371 19477930 ~ 19482625 (-)

Expression


Co-expression Network