LOC120566528


Basic Information

Item Value
gene id LOC120566528
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19723502 ~ 19727291 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813054.1
tgttgaggatgaggaccagcctgaaccggagtgTTAAATATCAAGTTCCCACCTGACCTGCCTTATTCATGGACTGTCAATCACCACTAAAACCACGCCCCTATCCAATCTATATAACTCCGCCCTTCAGGCCTGTGGCCCTCTTTTCCCTCCAAACAAAACCAGGCAGAACAAAGAAAGGAGTGATGTGAGTTGATGGACCTTTTCATTGTATAACCCTTACTATTTGGTCAGTTGAATGTTATACCTTGAAGTTGAATGTATCTTGTTTGATTTATGCTAGATTTCAGGGTGACATCCTGCTTAACGTTAAGAGAAAACCGTAGTACAGATTGTGGATGCAGTGCAGACTGTGGATGCATTACTGATACAaaatcatccattcatccatgcatccattcaTCCAATTACCTGCCACCAGTGTAAACCTTTCCCTGCCTTGATAACAATAAAACCTTGGAACGGCACTGGatcctgtgtttaaatgtgcacacCACATTagatgttcagtgaaccaacacCATCAGCGAATAAGAGTTTTGAACATGGTCCTTCGAGCCGGAGGAACATCTATGTAGGATGACGGACCCAGAAGCCGTTTCAGCTGGAGAAGAGGggcagcatggaggaggaggaaggccaCGCAGGGGGAGTGTGCCTCCGACATATCTACAAGACTACCAAACCGAGTTCTATGGCAGGCCATCCAGACCCATAACGGAGTGTGCAGAACATGTGTCGTCAGCGACTTCAGAGACAGTTCTATTACGTCAGGAGGTATCACAATTAAAGGCTATGGTTAAAGAACTAGTAGGAAGAGTTCAACAGTATGAACAACTGAGCTACTCAGAGGAGGACTCGGAGGCGGAGCCACTGATTGGTACTGAGGACCAGGACAGAGCCCAATCTGAGCCTAACCTGCAGCTGTCTGAGGCAGTACCTGTAAACCCCGGAAAAGTTTCCCAATCAGCCCAAACCATTTATCCTTACGTCCCTAGGCCCTCTTTCCTTATGGAATGTAAGCATAACAGACTTGCTCCAACCTCCTATGCAAGACATGGTCCAGAGCTTCCACTGCAGGAACACTCGGGTCTGTTACCTTTAACCTCATCAGCTCATGGGCACATGCCTGTAATTCAGCCTCCTTTATCCCCACAAATACATCAGAGTCCCATACAAGTGCAAACAGACCATATGCCACCAACCTCTTCTGTCCGTGACACATCCCACCAAATATACATCCCAGTACCATCACAGGGGGTTAGCACAGCCCCAGTAGGCTACGGCCCTCGCGGTCAATCACTTTATCCCCATCCTAGAACTCAGGTGACATCAACCAGTTTACAGTCATCTGCTTACCATTCTAGATATGTAGATCCATACCAGTTTCAGCATGTGACTCAGCAACCTGTACAGCAGTCTCAACCCCAATACCTTCCGTCCCGGCCACTTCCAGTGCCATATGCCCCAGGGTTTACTGGAATTCCCCCTGGCCCAAGCTTTTCAGCACCTGTGGCTCCTGTACAGCAGGCTTCAAGGTATCCATCGAGAGTAGAGGGGCCTTCATTCCCTTATTTCATTCAAAATGACCCTCATGAGTTTATCATGTTGAAAATGGCCTTTATAAACCTTCTACAAGATGAACCAGAATTGTACAAATTTCATATCCTGTTGGACCATCTACACCTTCCCTCTGCACGCCATATCGCCCTTTCATATGCCCATGATCCACGACCTTTCTCCATGGCACTGGCGGCCTTGGAGCGACAATATGGCCAACCTCATCAATTGGCCCTCAGAGAGATCCAGACCATATTAGATCTCCCTAAACTGGCTCATGGGGATGCAGAAGGGTTCCAAAGTTTTGCAGTTAGAGTGAGGTCATTAGTGGGCATGCTACAATCCCTCAGATCAGGAGAAAGTGCTGCTGAACTGGCCTGTGCTTCACATGTTCAGCGGTTGTTGAGTAAACTCCCTGCAGAGCTAGTTTCTAGCTTTGCTAGACATGCCCGCTTAGCCTCTCCTAATGCTCATTACGACTTAGTGGACTTCTCTGCATGGCTTGAGGGTGAGGCGGAATGTCAAGCTGTTGTAGCGCAGGCCACTACCCTTTGTATTGGTGCTCCCCAGGCCCAAAGGAAGGATACAAACCAAAGATTCAGGTCTCCTTCAGCTACCATTCTCCACGGGGCTGATCGGAAGTCTCCACACGGACACAATGGATCCGGACATCAGCCACAATCCCAAATGAGGTACCCATGTGTATATTGTCAGTCAACCTCCCACTACCTGACTCATTGTGAAAGCTTCAAAGACTTGAGTGCAGATAAAGTAGTAAAATGGTTGAGGGAACACAACAGATGTTGGAAATGTAGTAGAACTCACAAAGCAGCAGATTGCACTTTGAGAAAACCGTGCCCCAGATGTAACGGTCAGCACCTAGGCATATTACATGATGTCAATAGAAACAAAAGCGCATCTAGAGTGTTGTACATGAACCCACAGAGCATGTCATCCAAACCACATATCCTGATCGGATCAGACAATCCATTCCTCATCACACCTATCGAGAGAGTCCAATGTGGTCCAAAGGGATCACCAGCTGCGGTGAAGACGAGGCTTGGATGGGCTCTACAAGGACCTACTTCCCTTGGTGAGTTATCTGACTCTGCTCACTGCCTCTTCACATCACAAGCCAACTGTTACACCGAGCTGAAACACCATGTAGAGAAACTGTGGCAATTTGATATCTTCCCCTTTAGAAATGAGAAATTGATCACTAGATCAAAGCAGGATAAGGAGGCCATGGACCTTTTGCAGGCAAAGACCTTACGAGTAAACACAGATGGAACTGAACGTTATGCAACCCCTTTGTTGAGAAGGAAAGCTGCACCTGAGCTAAATGCACCACTCCAATCTGTAATGCCCCTTCTTCGTAGATCTGAGCGTAAACTGGAGAAAAACCCTGGATTGGCTGACATCTACACTAATGAGATCAAAAAACTAAAGTATGCCGGTTACATTGAGGAAGTTGATGCGGGACGAATTGCCGACTCCCAAGAATCCTGGTATATCCCCCATCACCTAGTCGAGCACAATGACAAACACCGTGTTGTATTCAACTGCTCCTTCACCTATCAAGGCCAATCACTTAATGACCAGCTCCTTCCCGGCCCCATGCTAGGCCCATCACTACTTGGTGTTTTGCTCCGTTTCCGCCAACACAGGGTTGCTATGAGTGGAGATATAAAAGGAATGTTCCATCAAGTGAGGCTCCTATCAGAGGACAAACCGCTTCTCAGGTTCTTATGGCGTGACATGAAGCGATGA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813054.1 True 3330 mRNA 0.47 3 19723502 19727291

Neighbor

gene id symbol gene type direction distance location
spock1 spock1,LOC102785053 coding downstream 24733 19598361 ~ 19698769 (-)
dele1 kiaa0141 coding downstream 145656 19569535 ~ 19577846 (-)
LOC120566455 LOC100699740 coding downstream 154405 19528422 ~ 19569097 (-)
slc25a51b slc25a51 coding downstream 254094 19464471 ~ 19469408 (-)
LOC120566441 LOC100707887 coding downstream 288307 19432316 ~ 19435195 (-)
LOC120566486 NA coding upstream 14595 19741886 ~ 19751707 (-)
LOC120566601 diaph1 coding upstream 858691 20585982 ~ 20699203 (-)
LOC120566290 LOC104961544 coding upstream 974251 20701542 ~ 20703679 (-)
trpc7b trpc7,LOC101475915,LOC100711831,LOC102778756 coding upstream 988536 20715827 ~ 20770031 (-)
dock2 NA coding upstream 1087187 20814478 ~ 20834647 (-)
G106303 NA non-coding downstream 165930 19477168 ~ 19557572 (-)
G106259 NA non-coding downstream 273378 19340494 ~ 19450124 (-)
G106276 NA non-coding downstream 327508 19394810 ~ 19395994 (-)
G106248 NA non-coding downstream 402196 19320263 ~ 19321306 (-)
G106243 NA non-coding downstream 409086 19312809 ~ 19314416 (-)
G106349 NA non-coding upstream 129805 19857096 ~ 19857367 (-)
G106378 LOC108242387 non-coding upstream 218364 19945655 ~ 20052690 (-)
G106367 NA non-coding upstream 234663 19961954 ~ 20007579 (-)
G106375 NA non-coding upstream 312806 20040097 ~ 20055141 (-)
G106414 LOC103375287 non-coding upstream 352755 20080046 ~ 20092084 (-)
tlr1 LOC104951710,LOC102197886 other downstream 240877 19477930 ~ 19482625 (-)
tomm5 NA other downstream 286575 19435839 ~ 19436927 (-)
LOC120566717 LOC102215832 other downstream 473066 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 678551 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 1032092 18687788 ~ 18691410 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 244542 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 503617 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 1348466 21075757 ~ 21110067 (-)
G106728 mif other upstream 1400547 21127838 ~ 21130970 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other upstream 1451561 21178852 ~ 21187653 (-)

Expression


Co-expression Network