LOC120566532 (LOC103375285,LOC102798382,LOC102309450,LOC101072791,LOC101076589,LOC106516975)


Basic Information

Item Value
gene id LOC120566532
gene name LOC103375285,LOC102798382,LOC102309450,LOC101072791,LOC101076589,LOC106516975
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20075753 ~ 20078369 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813057.1
TGCTGACGGAGTACACACTGTAGGCTATAGCAATATAAATAGTAGTTCATATTTATAAGTAAAAGCTTATGTTTGAGACTCGTGAAATGGATCTAATCATACTTGGTCGATGAGGAACTGAATCACTGTATTtgcctaaaagaaagcctttaTTTTTTGCTTCAAAATGGGAGAACGAGGACAAAGGCGCCGAGTGAACTGCTGGTGGGTTGCCGGGATTTTATTGCTGTGCTTTGGGAAACGAATCTGGGCTCAGCTTAGATACTCTGTTCCAGAAGAAGTACAAGTGGGATACCCTGTTGGAAATATTGCCAAGGATTTAGGGCTTGACCTTAGCACTTTGACAGACAGGCGGTTTCGTATTGTTTCGGGACCCAACCATGCTCTGTTTCAGTTAAATCAAAACACTGGAGTGTTGTATATTGGAAAAATTACGGACCGCGAAGAGCTATGCGATGGAATCAAGATTTGTTTGATAAACCTGAAAATTGTTGTAGAAAGCCCACTGGAAATACATTACGTTGGCGTTGAAATAACAGATGTTAATGACCATTCACCGACTTTTCCAGAAAGCGAACAACGACTGGAAATAGCAGAGCATACTCCTCCAGGTACTCGTTTCCAAATTCATGCAGCTAGAGACCCTGATGTCGGTACACAGTCAGTCCGGTTATATAAGTTGAGCTCAAATGAATTTTTTGATACTGAAATCAGAGACAGCGAAGAGGACAAGATACCGTTTTTAGTGCTTAAAAAGCCTTTAGATAGGGAGCAAAAAGCAGAACACCGTTTAGTGTTAACGGCTCTTGATGGAGGCAGTCCGTCGAAATCTGGGAGCCTTAATTTAATTATTACCGTGCTAGATGCAAATGATAACCGCCCTGTGTTCAGCAAAGATATATATACTgttttattaaatgaaaatgccCCGATAGGAACTCTTGTTATACAATTAAACGCTACAGATTTAGATGATGGTTTAAACAGCGAAATTGAATACACGtttgaaaaaacacaaaagaaaaaagtgcaTGACACATTTGAATTAGATAGCGTCACTGGTGAGATTCGAGTGAAAGGAATAGTGGACTTTGAGGACACAGAAATTTACAGACTAGATCTGCAGGCTTCAGATAAAGGCCAGCTTCCTTGGACGGCCGAAAGTAGAGTTGTGATAAACATAAAAGATGTGAACGATAATCAGCCAGACATTGAAGTAACATCATTGTCCAATGTAGTCCCGGAAGATACAAAGCCTGGCACTGTTATCTCCCTCATCAGTGTTACGGACAGAGATTCTGGGGTTAATGGAAAAGTTATTTGCAAAATTTTGGACAATGTTCCGTTTGATTTGACGCCATCCATTGAAGAAAACATGTACTCTCTTGTCACAAAGGGGCGTTTAGACAGAGAAATTGTGTCCCATTATGACATCACAATAACAGCTACTGACTGTGGTGAACCTCCACTTTCCGCTGTTAAAACCTTGAGTGTTCAGGTGTCAGATGTAAATGACAACAGACCACTTTTCAGTCAGAATCCATTTGAACTTTATTTGGTAGAAAACAATGCCCCGGGCGCATCAATATTTTCTGTAAGTGCTGCTGATAATGATCTCAATGAAAATGCAGCAATAGCATACCACATTGTGAGAGGTAATGGGCTGCATCGTGATATAACATCTTTCCTAAATATAAATTCAGACAATGGACAGATTTCCGCGCTAAAAAGTTTTGACTTTGAAACACTGAAAACGTTCCAGTTCCAAGTTGTTGCCACAGATTCTGGAACTCCGTCACTAAGCAGCAACGTCACAGTGAACGTGTTCATTCTGGATCAGAACGACAACGCTCCAGTCATCCTGTATCCAGTCAGCTCTAACGGTTCTGCTGAAGGTGTGGAGGAGATTCCCCGCAATGTGAACGCAGGACACTTGGTGACTAAAGTCAGAGCCTATGACGCTGATATAGGATATAACGGCTGGTTActgttttcactgcaggacgTTACTGACCACAGTCTCTTTGGTTTGGACCGCTATACAGGACAGATCAGAACACTTCGCTCATTCACAGAGACAGACGAGGCTGAGCATAAACTGGTCATACTGGTGAAAGACAATGGGAACGTTTCACTCTCAGCAACAGCTACTGTGCTTGTCAAAGTTGTGGAGCCCAAAGAGGCTTTTGCTGCTTCTGATGTTAAAAGTGCAACaaaggatgaggaggagaataATGTGACTTTTTACCTGATGATAACTTTGGGCTCCGtttcaacactttttctcaTCAGTATCATCGTGCTGATTGCAATGCAGTGCTCCAAAACCACAGActatacttctaaatatctacaagAGACTAATTATGATGGGACACTGTGTCACAGCATCCAGTACAGATCTGGAGACAAACGGTACATGCTAGTAGGACCCAGAATGAGTATAGGATCTACTATAGTCCCGGGCAGCCATGCGAATACACTAGTGCTGCCTGACAGGAGAGGGACATCTGGAGAGGTAAGACTTTTAAAGCAAACGCCAACAAATGCAGCTCTTTGCTTGGTTGTGATTGCTGTGCGTGGTGCTGAAACGCTTTggcttttctgtttctgttaa

Function

NR:

description
PREDICTED: protocadherin beta-15-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813057.1 True 2617 mRNA 0.42 1 20075753 20078369

Neighbor

gene id symbol gene type direction distance location
LOC120566530 LOC103375287 coding upstream 778 20072355 ~ 20074975 (+)
LOC120567232 LOC103375287 coding upstream 4696 20068463 ~ 20071057 (+)
LOC120566529 LOC103375284,LOC102199591,LOC108242356,LOC106933149,LOC106516975 coding upstream 8188 20064986 ~ 20067565 (+)
LOC120566322 NA coding upstream 35373 20034393 ~ 20040380 (+)
si:ch73-233f7.1 LOC103359310,LOC104951883,LOC102312450 coding upstream 53490 20015208 ~ 20022263 (+)
LOC120566533 LOC103375287 coding downstream 4004 20082373 ~ 20085207 (+)
LOC120567230 LOC103375287 coding downstream 11171 20089540 ~ 20145603 (+)
LOC120567242 NA coding downstream 17647 20096016 ~ 20098579 (+)
LOC120567243 NA coding downstream 21224 20099593 ~ 20102097 (+)
LOC120567189 LOC101076589,LOC107376492,LOC103375150,LOC102305013,LOC101074748,LOC101075026,LOC107989589,LOC106514196,LOC107373859,LOC102308212,LOC106604881,LOC106604828,LOC103390873,LOC101161607,LOC102780923,LOC101465246,LOC101074087,LOC104937910,LOC103366336,LOC104959671 coding downstream 24654 20103023 ~ 20256413 (+)
LOC120567444 NA non-coding upstream 76952 19973785 ~ 19998801 (+)
LOC120566743 NA non-coding upstream 120790 19950757 ~ 19954963 (+)
G106351 NA non-coding upstream 134038 19940938 ~ 19941715 (+)
LOC120566488 NA non-coding upstream 227475 19844839 ~ 19848278 (+)
G106218 NA non-coding upstream 473660 19515958 ~ 19602093 (+)
LOC120567249 NA non-coding downstream 195464 20273833 ~ 20275911 (+)
G106577 NA non-coding downstream 632140 20710509 ~ 20731673 (+)
G106679 NA non-coding downstream 1022115 21100484 ~ 21100835 (+)
G106684 NA non-coding downstream 1029129 21107498 ~ 21108359 (+)
G106707 NA non-coding downstream 1114697 21193066 ~ 21194849 (+)
LOC120566323 LOC102781894,LOC101481808 other upstream 14415 20028863 ~ 20061338 (+)
G106237 spock1 other upstream 423279 19604840 ~ 19652474 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 1105807 18963934 ~ 18969946 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 2176022 17890170 ~ 17899731 (+)
G105677 NA other upstream 2390054 17682919 ~ 17685699 (+)
G106465 LOC104955902 other downstream 273352 20351721 ~ 20352167 (+)
hrh2a LOC103354784,LOC104948895 other downstream 856360 20934729 ~ 20947415 (+)
selenoh selenoh other downstream 1201318 21279687 ~ 21283229 (+)
zdhhc5b zdhhc5 other downstream 1211162 21289531 ~ 21350978 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other downstream 1370431 21448800 ~ 21468827 (+)

Expression


Co-expression Network