LOC120566536


Basic Information

Item Value
gene id LOC120566536
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21187612 ~ 21196664 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813061.1
GGCTGGCTGGGTAATTTCATCCTCTCCTTCTTGTTAAGGCAAATGGCAAACGCACAAACTTGACACTATTTCAGATATTCACTCTCTAACATCAATGTCCTCCATTTTGGAGTCTCTAATTGCAAAGGCTCGTTATCTGTTAAGTAATTTGTGTCgcaacctattttttttttttttttaaactcgtTACAAACTCATTAATTTCCAAACTTTTAAACTGTGGTCAGGTTCATTTTCTGCGTGACTATTAATTTGCAAACACGGCGTACACCTCAGCACAGTTAAGTGTTGACTTTCTCAGCTTTGCTGTGGTCTCCGGTTACACATGCTGAGAAGGATAGctgccgtgtgtgtgcgtgcgtgacaTGTCGAAGGAACACACGAGGGTTGTACATGGACGTGAAAGTGTCTCGGCGTTTCCAGTTTGCAACACATGTGAAATTCATCCCACGCAGATGGAGAAGCAGCTGCTGGATCACGAGGGCTTGAATGGGGAGATGTGGTGCTACCAAAAACCGGGGTTTGAAGCCCTCCTCATCGCTGAGCTGCAGAAACAGCAACAGTGCAGCCAGTTCTGTGACACTCTGCTCAAGACAGAAGgCATATCCGTACCAGCACACAGTTGCGTTCTCTCAGCTGTCAGCCCCCACATCTCCTCCGCTCTGTCCTCCGCGCCCCCGCCCCCTGCAGGACAGAGTCGACTCTTGGAGTTTCGGGCTCTCGGCGCCTGCACCCTGCTCCACATGGTCAGACTGCTGTACTGTGGGGAGATGGCAGGAGAGGGGGAGAACGAAAAGCAAGAGGCTATTTCTGCTGCAGCCAAGCTGGGCATCCATGGGCTTGTGGAGGTCACAAAAAGAGATCGTAAGAGCagaaaagaggaaggagaaggCTGCCATACGGAGGTAGGTGTGCAGACGGAGCCACTGATGCCTGAAGAGAATGAAGGGAGACGGAGCAGGTGGAGGAGAGACGTGAGGGATGGGAGCACCTTCCTGTGGAAAGAGACACTGTCAGATGGTGAAAAAGAAACATGGACTCAGACAGAGGAGCAGCAGGTAAACACGGGTCCCCCTTCTCACCCAGCAGCCTCCTTTGAGACCATTGATATGGCTGCTCTCCAGAGTTTTGGAATGACGGGCTCCCATCTTGTTCCCCCTGAAATTCCCTACATTCCCATATCCCTCGTCTACCCACCAGATGAAAACCAAACACACCAACCCCTATCTGCTTTCGTAGACTCTATGCAAGAATCCACAGCAGCTGAACACACATCAGTTCCTGTTGTGGCGCCGCCGCATGCCTTtgtccccccacccctccttccTTTTACCAGCCAAGCGACCTCGTGTGGTGCTGCCTCTCAGAGCTGGTGGGCTGCCCCTAAGGGAGCTTCCAGAAATGTTGCAGCAGCGGAAGACTGGGAGGATGAGCAGTTAGAGCAGTTTCAAGGCAACATCCCAGGATACATCAGCTACTTCCTGAAACCGGACAAGGAGGAGGGCTCCCGCAGGGGGCGAGCAAGGAGTAGGCGGGGAGCAGGGGTGGGAGGCTGCAGAAATTGTTCCTGCAGAGGTGGGGGCTGA

Function

GO:

id name namespace
GO:0030983 mismatched DNA binding molecular_function

KEGG:

id description
ko04110 Cell cycle
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813061.1 True 1586 mRNA 0.52 4 21187612 21196664

Neighbor

gene id symbol gene type direction distance location
crybb1l1 LOC103354769,LOC101482390,LOC100705848,LOC102798478 coding downstream 8840 21176882 ~ 21178772 (-)
LOC120566535 NA coding downstream 49174 21136616 ~ 21138438 (-)
mif mif coding downstream 56610 21128711 ~ 21131002 (-)
LOC120566627 NA coding downstream 59052 21121202 ~ 21128560 (-)
LOC120567342 LOC103354776,LOC102193607,LOC102298256,LOC102799358 coding downstream 66582 21116481 ~ 21121030 (-)
LOC120566637 ctnnd1 coding upstream 101 21196765 ~ 21219431 (-)
LOC120567254 NA coding upstream 23553 21220217 ~ 21230375 (-)
smtnl1 smtnl1,LOC106942261 coding upstream 36642 21233306 ~ 21238523 (-)
tmx2a tmx2 coding upstream 105406 21302070 ~ 21308135 (-)
slc43a1a slc43a1 coding upstream 117630 21314294 ~ 21348934 (-)
LOC120566633 NA non-coding downstream 23549 21149902 ~ 21164063 (-)
LOC120566356 NA non-coding downstream 113699 21070141 ~ 21073913 (-)
G106645 NA non-coding downstream 187401 20999959 ~ 21000211 (-)
LOC120567470 NA non-coding downstream 226720 20955337 ~ 20960892 (-)
G106632 NA non-coding downstream 240039 20946038 ~ 20947573 (-)
G106784 NA non-coding upstream 56241 21252905 ~ 21256647 (-)
G106793 clp1,LOC102795812 non-coding upstream 89650 21286314 ~ 21287781 (-)
G106802 med19 non-coding upstream 115699 21312363 ~ 21314127 (-)
G106813 NA non-coding upstream 163652 21360316 ~ 21408289 (-)
G106825 ssrp1 non-coding upstream 192948 21389612 ~ 21401183 (-)
G106728 mif other downstream 56642 21127838 ~ 21130970 (-)
LOC120566885 ppp2r2c other downstream 77545 21075757 ~ 21110067 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other downstream 953688 20230908 ~ 20233924 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other downstream 1205979 19971833 ~ 19981633 (-)
tlr1 LOC104951710,LOC102197886 other downstream 1704987 19477930 ~ 19482625 (-)
G106988 NA other upstream 593589 21790253 ~ 21790725 (-)
G107015 NA other upstream 923021 22119685 ~ 22120067 (-)
G107117 NA other upstream 1494496 22691160 ~ 22692831 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 1794323 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 1895901 23092565 ~ 23177026 (-)

Expression


Co-expression Network