LOC120566545


Basic Information

Item Value
gene id LOC120566545
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 27815285 ~ 27836229 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813069.1
TCCAGCATAACTTTGCGTACTTTTGCGCGCCCTTGACTCTCATCGTGAAGAAAATACGACAAGAAAGCAACATACTGATCGGTTAATAGCTAGCTATATTATCAGTGTTAGCAAAGAGCAGCTAACCTGCGGTTCAAAACCAGTTTACAATCTGTGGTGCCTCTTTCACTGAGAATGGCAAGTGGAGACTCCCTTTTGGACAGTCTTGAGGAGTTGGATGACTTCTCAGATTCTGACAGTGACTATGAGGCCACAACGAAAGCTACAAAGCGAAGAAAACAGCCAGTGACTGGACTTCAGCCACCCAAGAGACCCAGGCGTAAAGCTGCATTGAGGGTGTCCAGCACCAGTAGCAGCCCCAGCCCCACGCCTCAAAACCCCTCCCTGCAGCAGCACTCCCAAGGGACATCCAGGCAGGCCTCTCCTAGACCTGTGACGAGAGCGAACGAGGGAATCGGGGGAATCAGTGCAGAGGATATCTATGATGCTGTCCGCTCTGGAAAGAGTGCCATGGTGACGGTGGTGGACGAGTGGCTGGACAGCTACAAGCGAAGCCGAGAGGTGGGGCTGCTGGTGCTCATCAACTTCATTGTTCAGTCCTGCGGATgcaaaggtcagaggtcaagaGGGAGCCCACAAGTTGGGGGTTTGCTGAGAAATTTAAACAACCTCCATATCCTTGGAGATTATGATCAGAAGGATGGAGATTCAGTGAACTACCCTCTGTGCACCCCAGGCCCTCAGCTAAGGCGATTCAAAGCCAGCCTGTGCGAGTTTATTCGGGTTCTGGTGAGCTCCTGTCGGAATAGCCTCATTTTTGATGAGTACCTTTTCCCCTCCCTGTTGGCTCTGCTCACAGGCATGTCTGACTCCCAGGTCAGAGCCTTCAGACACACCAGTACCCTGCTTGcCATGAAGTTGATGACTGGTCTGGTGGAGGTAGCTGTGATAGTGTCGGTTCAGCTGCAGACCACCCAGCGGCAATACGACACGGAGAACAGCAAGAGGGAGCAAGACAGAGCCTCTGGCAGACTGGAGGAGCTGCAGGCCACCATCAGTGagCTGCGGGAGAACAGGGAGGAGGTATCCTCCATGATGAACGCCACTTTCcgtggtgtgtttgtgcaccGTTACCGTGACCGGCTGCCTGAGATCCGGACTGCATGTATTGAGGAGTTGGGCATGTGGCTGAAAACGGACCCTGAAGACTTTCTGAATGATGGGTGTCTTAAATACCTGGGGTGGACCCTGCATGACAAgCAAAGTCCAGTGCGTCTGCAGTGTGTTCGTGCCCTGCAGGGTCTGTACCAGGAGAAGGAATTCATTGGCCGCCTGGAGCTTTTCACCAGCAGATTTAAAgaGAGGATGCTCAGCATGGCACTGGACAAAGACCCAGAGGTGGCAGTGGAAGTGGTCAATCTGTTGCTGCTGATCCAACaGAGGACAGAGGAAGGTCTGAAAGAAGAGGAGTGCGGCCACATCTATCCCCTAGTTTACGCTCTAAACAGAGGCCTGGCGTCTGCAGCCGGCGCCTTCCTCTTTAACAAgCTGAAAAGTGTGATTGCCAGTGACAACCAGGAGAAtgataaaagtgaaaatgcagCCTTCTTTCAAATCCTCATCGCTTTCTACATCCAGAGTGAGTTCCATGAGCATGGGGCGTACCTGCTGGATAGTCTGTGGGATGTGGCAAGACCTGAGCTGAGAGACTGGGAGACTATGACGACATTACTGCTACAGGAGGCTGGTCTGATGTATGAGGAGGAGGGGGCTCTCATAGAGCTGATGATGTGTGCCATCAGACAGGCAGCACAGGCAACCCCCCCTGTTGGGAGAACTCAGGGCAAGAAGATCCTGGGTATGAAGGATAAGAAGGTCCAGGAACAAGACAGGAGACGTGTCACCACACACTTCATCCCCTTACTGCCCCAGCTGCTGGCCAAGTACTCAGCGGATGCAGGGAAGGTGAGCCTCCTTCTCAAAGCTCCCCTCTACTTTAACCTGGAGGTGTACAACAGTGCTCCGCGGCTGGAGAAGTATCTGGACCTGCTGCTGTCTCAGATATGTGGTATTGTGGAGAAGCACACAGAGGCCACTGTGCTAGAGGCTTGCGCCCAACTGGTCAGCACCCTTTGCTCCGAGTCCTACACCTTCTCCTCCCGCGCACACCTGGCATTCAGCCAGCTGCTGGACAGCCTGACCGAGTGCTTTAGCACCTACTTAAGTGACCTGCTGCAGgGTACTGCAGATGACGATGACGTATACAGTGCAGCCACTGCTTTAAAAAGGATTGCAGCCCTCAGCAGTGCCAAGGACCCGACAGGCTGGAAGCTGTTCGACTCTTGTCTTGAGCTTCTGAAAAGCAGGATGGAGTCCAGAGAGCTCGACAAGGAGCTCATGGTGTCGGCTCTGAAGTGTGCAGCCTTTTACCTGATGTGGGCCAAAGTGAATGCAGTCAACTCCACACCAGCTGAGGGGGAATTGAACCGTCTGAAGAAGGAGATGCGTTCGTTCTGCAGAGTTTGTCAAACGTGTCTGTCTTTGAACCAGgctgagatcagagatcaaGCATTTGAGCTGTTGTGTGACTTGCTGCTCTTGTACAGTAGGAGTTCAGCTCGCTCTGAACCCGCCCTTCAAGCGCTGGTCCACCTGCCATCGGATTCCCTGCGCTCTGAGATGGCTGCTTTCCTCCTGGACTACGTCTTCTCTGACACTGAAGATGCTGAGCTCAACGttgagaatgaggaggagatgaagaTACGTCTTCTCCAGAGGAAGCGCAACCAGTTGTCTGGCTACTGCAAGCTGGTCATCTACGGGGTGCTGGAACTCAGCGCCGCCACCGACGTCTTCAAGCACTACAGCAAGTACTTTAAAGACTTTGGCGACATCATTAAAGAGACTGTAAGCAAGAGCAAGCTCATCAGTCCCATTCAGAGCGCCAAGACTGTGTGTCTGAGCCTGCAGCAGctgttcTCAGAGATGCTTACGGAGGACCACAGCAGGCAAGATCTCGGTGAGATTAGAGACTTGGCCAAGAGGCTTGCCATGAGCTTTGGCATCGATCTTCATCGTGTCCGTAAACCACTGGTGGCCCTGCACATGGACGGTGTACGTTTTGCATTTCGGGAACCACGGGAGGGAGAAGAGCAGCACATGAATGTGACCTTCTTGGAGATCCTCAGCGAGTTCAGTTTCAAGCTGCTGCAACCGGACCGCACCAAACTGGCTGCGTTTGTGAAATCAGAGTGTCCCAGTGCTGCCCTCTCCTGGCCGTCAGTCAGAATGTATCAGCGTTCCTTGGAGGGCCGCTCCTCTTCTAAAGCCAGAAAACAGGAGGAGGGAGGTGATGTCGTCTCCACACATAGTAGCCCTGTAGCTAAACGCAAGAGAACCACTGCTCAGGGTTCAGTTGCCAGCACAATCAGAGGATCCTGGTTGGACAGCAGCAGTATCCACAGCGTCCTGCACACGCCAGCCCTCACCTCCACTGCCCAGAGACAGTCAACCAAGGTCCTGGCCTCCAAAAAACCCAGTGCCACACAATCGGATATCAGCAGCGAGGATGAGTTCTCCTTAGGGTCCCAAATACGAAAGGTAAGGCCCGTTAAACGACACCAGCTCTCCTCCAGCCAGACTGGCCCTCCTTTGGATCAGCAAGACCTGAACTCCCACCTCACCTTGCTGTCTTTGATTGAGGACGAAGACGCAGAAAGAGAAGAGCCTGAGATTGAGGATTACGAGAGTGACTCTGAACACGAATCTACATATACactgCCTTCCACACGCCACACCTCCGCCAGTATCCTTGATGAGCTCTTTGAGTGATGACACAGAGACCCGGACCGCCTGGGGAACAGCACTTCTCTTTCTTTAATGTATCTCTTTTAACACTACTGCGTTTTCAGTGGTTTCGGTACATTTGAGTGTATAATTAGGGCCAACTGTTCTTCTACATGACAGAGATCACCTATCTGATCTATTTCAGTCATTAATTTTGTTGGAGGGGAAGAGAAAGTCAAAATGATTATGAAGTTTGGGGACAAAGGTTGTTGCCATTCACAATTAGGAATGTTTGTTTTGaacacaaaatgtttaaaagaaatgtgttgAAGTTCAGTTAGATCCCTGTTGGCTGGCAGCAAACTTAGTCTTTCTTCCTGTGTTCCACATTTTGAATTTAGTTTCATATCTTTCACTGTTGTTGAcagctttttgttgttgttgtttttttgtttaacacTTGTTAATTTAATGTAAATTAAAAGATGCTTGATTGAGCAAAGTAACACTAAAAGTGTATTTAATAAGATCACATTACAGTGTGATGTACATAAATTCC

Function

GO: NA

KEGG:

id description
K06671 STAG1_2, SCC3, IRR1; cohesin complex subunit SA-1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813069.1 True 4345 mRNA 0.51 32 27815285 27836229

Neighbor

gene id symbol gene type direction distance location
mcm7 mcm7 coding downstream 1096 27803358 ~ 27814189 (-)
LOC120566642 LOC107379338,LOC102290741,LOC103367381,LOC102209025 coding downstream 12949 27799826 ~ 27802336 (-)
trnal-aag_2 NA coding downstream 36071 27779133 ~ 27779214 (-)
bod1l1 bod1l1,LOC107705061 coding downstream 45030 27756523 ~ 27770255 (-)
nkx3-2 nkx3-2 coding downstream 71203 27740794 ~ 27744082 (-)
LOC120567058 NA coding upstream 15458 27851687 ~ 27865367 (-)
LOC120566982 NA coding upstream 72691 27908920 ~ 27910963 (-)
LOC120566987 NA coding upstream 78849 27915078 ~ 27917448 (-)
LOC120566989 NA coding upstream 89195 27925424 ~ 27927535 (-)
LOC120566988 NA coding upstream 98065 27934294 ~ 27936535 (-)
G108353 NA non-coding downstream 42304 27772676 ~ 27772981 (-)
G108352 NA non-coding downstream 43214 27771851 ~ 27772071 (-)
G108351 NA non-coding downstream 56590 27757793 ~ 27758695 (-)
LOC120567396 NA non-coding downstream 419254 27394158 ~ 27396031 (-)
G108194 NA non-coding downstream 723610 27091382 ~ 27091675 (-)
LOC120566995 NA non-coding upstream 131835 27968064 ~ 27970362 (-)
G108422 NA non-coding upstream 144821 27981050 ~ 27981447 (-)
G108424 NA non-coding upstream 145729 27981958 ~ 27982329 (-)
LOC120566994 NA non-coding upstream 167305 28003534 ~ 28004849 (-)
LOC120566468 NA non-coding upstream 259419 28095648 ~ 28096127 (-)
aurkb fbxl12,LOC103367279,LOC104928693,LOC101076892,LOC103149573 other downstream 25074 27780132 ~ 27790211 (-)
atp8a1 atp8a1,LOC102786596 other downstream 437164 27269370 ~ 27378121 (-)
LOC120567151 bend4,LOC102786006 other downstream 552584 27252395 ~ 27262701 (-)
LOC120566767 NA other downstream 719388 27068521 ~ 27095897 (-)
G108191 NA other downstream 749338 27065418 ~ 27065947 (-)
LOC120567057 NA other upstream 1339 27837568 ~ 27839107 (-)
LOC120566991 NA other upstream 116027 27952256 ~ 27955694 (-)
G108433 neto1,LOC101071133 other upstream 185508 28021737 ~ 28023229 (-)
LOC120566547 NA other upstream 188341 28024570 ~ 28038700 (-)
fam13b fam13b,LOC102777128 other upstream 878634 28714863 ~ 28795508 (-)

Expression


Co-expression Network