fhl1a (fhl1)


Basic Information

Item Value
gene id fhl1a
gene name fhl1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24527664 ~ 24541162 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813146.1
GGTATATACAGCCCCCAATAACATACCAAGGCTTAGGGGCTCTGGGTTTGACCCTCTGTGGATGCTACCGTCTCCTCCTGTCCTTGTATTGTCTTCgttttctccttcttcttttccttctgACTGGAATCATGACTTTCAGACACTCAgGTGCCAGGAGTTATCTCAGCTCCACCATGACTGATCGCTTCGACTGCTACTACTGCCGGGACAACCTGCACGGGAAGAAATATGTGAAGAAGGACGAAAAGCATGTGTGCACCAAGTGCTTCGACAAGCTCTGTGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGTGCTGACGCCAAgGAGCTGCACCATAAGAACCGCTACTGGCATGAGGACTGTTTCCGCTGTGCCAAGTGCTATAAGCCGCTGGCCAGCGAGCCATTCAGCGCCCGGGACGATGGCAAGATAATGTGTGGCAAGTGTGGCTCCCGGGAGGATGGCAACCGGTGCCAGGGCTGCTACAAGGTGGTCATGCCAGGATCCCAAAACGTGGAGTACAAGAACAAGGTGTGGCACGAGGAATGCTTCACCTGCTTTGAATGCAAGCAGCCGATCCGCACACAGAGCTTCCTGACCAAGGGTGATGACATCTACTGTTCTCCCTGCCATGACAAGAAGTTTGCCAAGAAGTGCTTCCACTGCAAGCAGCCCATCTCTTCTGGAGGGATCAGCTACCAGGACCAGCCGTGGCACTCCGAGTGTTTCGTGTGCCACACCTGCCGTAAGACTCTGGCAGGAGCTCGCTTCACTTCACACGAGAACAAAGTTTACTGCGTGGACTGCTTCAAGACCGATGTGGCCAAGAAGTGTCATGGATGCAAGAACCCAATCACAGGGTTCGGCCATGGCACCAATGTGGTGAACTATGAGGGATACTCCTGGCATGAGTATTGCTTCAACTGCAAGAAGTGCTGCCTCTCGCTGGCCAACAAGCGCTTTGTCATCAATGGAGATCACATCCACTGCCCTGACTGTGCCAAGAAGTTGTGAACTGCACAATCAGTTGTGCAGAAGAATACCTGTTTAAAGCGGAATTGCACCAACACTGACTTTTAGACtgttaatttttgttttgtttttggggaGTTAAATTGAGGCCTCAACAGAAATGTTAGTCTGTTTCTGAATTAGCATAAAAATGTCAATTTTGGTGAAACTTCTCTTTATAAGGGTGACAGACTATAGAAGCTCTTTCAACTAAAGATGCACTAGCTTAACTCATATCTACATATACATTATTGCAACTTGTTTCAGTGTTGGATACTAACATGGCAACAGACTTTTTGTGGGATTGTGATGTGCACTATTAGCCTAATCTAATCCAGATATGGTGCAGTTTTAGGAGACAAAAGCCTTTTTAGTGCCTTACTGGAATATTTCAGAGAATAATACGCTTTTACTTGCATACTGCTGCTTATACATACCAGATTTaattaatcatcatcatcaattaaTCATTCACGTTGGAATGGATTATCAgaattttcaaaaatgttgagTGACTTTAAAAGTAGGTCTTTGAGATCGATGCTGAAATATAAACTGCTCATGTAATCAAGACTTTGAGTGAAGTCAAAtgtaaaacaagaataaaaggAGGAAGTGA
>XM_039813147.1
agctgccttgcctccGCAGATTTTACCTCTCGGCTAAACCCAccggacacacacactgctgctggTGTCGAGTGAAAGACATCTCATCTGCTCGCTTTGGAAGAGGTGCCAGGAGTTATCTCAGCTCCACCATGACTGATCGCTTCGACTGCTACTACTGCCGGGACAACCTGCACGGGAAGAAATATGTGAAGAAGGACGAAAAGCATGTGTGCACCAAGTGCTTCGACAAGCTCTGTGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGTGCTGACGCCAAgGAGCTGCACCATAAGAACCGCTACTGGCATGAGGACTGTTTCCGCTGTGCCAAGTGCTATAAGCCGCTGGCCAGCGAGCCATTCAGCGCCCGGGACGATGGCAAGATAATGTGTGGCAAGTGTGGCTCCCGGGAGGATGGCAACCGGTGCCAGGGCTGCTACAAGGTGGTCATGCCAGGATCCCAAAACGTGGAGTACAAGAACAAGGTGTGGCACGAGGAATGCTTCACCTGCTTTGAATGCAAGCAGCCGATCCGCACACAGAGCTTCCTGACCAAGGGTGATGACATCTACTGTTCTCCCTGCCATGACAAGAAGTTTGCCAAGAAGTGCTTCCACTGCAAGCAGCCCATCTCTTCTGGAGGGATCAGCTACCAGGACCAGCCGTGGCACTCCGAGTGTTTCGTGTGCCACACCTGCCGTAAGACTCTGGCAGGAGCTCGCTTCACTTCACACGAGAACAAAGTTTACTGCGTGGACTGCTTCAAGACCGATGTGGCCAAGAAGTGTCATGGATGCAAGAACCCAATCACAGGGTTCGGCCATGGCACCAATGTGGTGAACTATGAGGGATACTCCTGGCATGAGTATTGCTTCAACTGCAAGAAGTGCTGCCTCTCGCTGGCCAACAAGCGCTTTGTCATCAATGGAGATCACATCCACTGCCCTGACTGTGCCAAGAAGTTGTGAACTGCACAATCAGTTGTGCAGAAGAATACCTGTTTAAAGCGGAATTGCACCAACACTGACTTTTAGACtgttaatttttgttttgtttttggggaGTTAAATTGAGGCCTCAACAGAAATGTTAGTCTGTTTCTGAATTAGCATAAAAATGTCAATTTTGGTGAAACTTCTCTTTATAAGGGTGACAGACTATAGAAGCTCTTTCAACTAAAGATGCACTAGCTTAACTCATATCTACATATACATTATTGCAACTTGTTTCAGTGTTGGATACTAACATGGCAACAGACTTTTTGTGGGATTGTGATGTGCACTATTAGCCTAATCTAATCCAGATATGGTGCAGTTTTAGGAGACAAAAGCCTTTTTAGTGCCTTACTGGAATATTTCAGAGAATAATACGCTTTTACTTGCATACTGCTGCTTATACATACCAGATTTaattaatcatcatcatcaattaaTCATTCACGTTGGAATGGATTATCAgaattttcaaaaatgttgagTGACTTTAAAAGTAGGTCTTTGAGATCGATGCTGAAATATAAACTGCTCATGTAATCAAGACTTTGAGTGAAGTCAAAtgtaaaacaagaataaaaggAGGAAGTGA

Function

symbol description
fhl1 Enables transmembrane transporter binding activity. Involved in several processes, including negative regulation of mitotic cell cycle phase transition; regulation of membrane depolarization; and regulation of potassium ion transport. Located in cytosol; nucleus; and plasma membrane. Implicated in Uruguay faciocardiomusculoskeletal syndrome; X-linked Emery-Dreifuss muscular dystrophy 6; reducing body myopathy 1A; and reducing body myopathy 1B. Biomarker of hypertrophic cardiomyopathy.

NR:

description
PREDICTED: four and a half LIM domains protein 1 isoform X1

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K14365 FHL1, SLIM1; four and a half LIM domains protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813146.1 True 1638 mRNA 0.46 6 24527664 24533888
XM_039813147.1 False 1593 mRNA 0.47 6 24527664 24541162

Neighbor

gene id symbol gene type direction distance location
adgrg4a NA coding downstream 37521 24477565 ~ 24490143 (-)
vgll1 NA coding downstream 50936 24473175 ~ 24476728 (-)
tmtops3a LOC103376588,LOC104957983,LOC101471053,LOC102197526,LOC102311316 coding downstream 62153 24459097 ~ 24465511 (-)
cd40lg NA coding downstream 70455 24454805 ~ 24457209 (-)
LOC120566938 tm9sf2 coding downstream 109353 24408676 ~ 24418311 (-)
slc9a6a slc9a6 coding upstream 2848 24544010 ~ 24558121 (-)
drp2 drp2,LOC107724836 coding upstream 41801 24582963 ~ 24789913 (-)
cenpi cenpi coding upstream 250221 24791383 ~ 24805738 (-)
tmem35 tmem35a coding upstream 266123 24807285 ~ 24809933 (-)
arl13a arl13a,LOC102776915,LOC103352893 coding upstream 273923 24815085 ~ 24820493 (-)
G107765 NA non-coding downstream 3075 24523123 ~ 24524589 (-)
G107764 map7d3 non-coding downstream 13426 24497336 ~ 24514238 (-)
G107759 NA non-coding downstream 58477 24468949 ~ 24469187 (-)
G107742 NA non-coding downstream 73530 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding downstream 76895 24448121 ~ 24450769 (-)
G107772 NA non-coding upstream 2218 24543380 ~ 24543713 (-)
G107855 taf7l,taf7 non-coding upstream 20041 24561203 ~ 24563631 (-)
G107874 xkrx,LOC102776626 non-coding upstream 282919 24824081 ~ 24835348 (-)
G107880 NA non-coding upstream 299665 24840827 ~ 24841052 (-)
G107885 LOC104956976 non-coding upstream 335660 24876822 ~ 24881870 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 538763 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 1340606 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 1350638 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 1392879 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 1534435 22990987 ~ 22993229 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 32279 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 320808 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 722010 25263172 ~ 25264864 (-)
G107989 NA other upstream 738441 25279603 ~ 25288086 (-)
diaph2 NA other upstream 1296168 25837330 ~ 26258199 (-)

Expression


Co-expression Network