LOC120566642 (LOC107379338,LOC102290741,LOC103367381,LOC102209025)


Basic Information

Item Value
gene id LOC120566642
gene name LOC107379338,LOC102290741,LOC103367381,LOC102209025
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 27799826 ~ 27802336 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813204.1
GTTAGTGCAGTGAAGACAGCTTCCTGAGCCAGGGGTTCGAGATGATTTCTTCATTGTGGTCGTTGGGGGCACTCTGCTGTCTCATGTTGCTCCCAGCCCTGTTGGAGGCTAAATCTTTGTTAAACGCCATCAAGCAGGAAGAGATGGTACCCGTCGGTGATGTTGGTATTGACTCAGAGAAAGCAAATGGCTTTCTGAGTCACTCCAGACCGAAGCGTAACGTGGACCCCAGGTGGTACAGAGGAAACCCAGACTTCCAGGCTTACTACCGCTACTACAGCAGCATCGGACACACTGAGGGGCTCTATGAGATCGACAAGCTGCGGATGCTCTATCAGCAAATGAGGTACCTGGAGCACACCTATGGCCCCGACGCGTCCTATTTCCAGAGCAAACTGGGAGTGCCGATGATCATGTGTGACCCAGCTACAGACAAGAATTGCAAAGtcgctcttcctcctcctcccccaatGAAAGGGGGCCCAAAGCCCACAGAGCCCCCAGTAACCcctgctcctctccctcctgCTCCAGCCATTTCCCAAGCTGATGTACTCTACCTCTGCAACAAGAAAGACCCCCTCTGTAAGCCCCACATCGTCTACCTGCCCACCGGCTCCGTGCCTGTGCTCTGCGACCCCCGCTACCACCCCCACTGCACTCCCCAGAAAGTTCCTGCTCCAGTCGCAGTGCCCCAacctcctccccctccaccAAAGAAGTCCgccccacctccacctccacttGTCCTCGTCAAGAAGTCTCTCCCGGCCCCCATCCGCACCTTCAAGGGTATGGAGTACGACTGTGACCCCTACTGGGACCCCGACTGCCTGATTGACCACCCACCCAGGCCCATTAAGGGGAAGATCGTGGTCCCCCCGCCGCCACCACCACCCCCTCCTgtggaggaggaaaagaaagaggaaccAGTGGAGCAGCCAGCTCCCCCTGCTCCCATCGAGAAGAAAGTAGGCCTCTACCCATACCCTTACTACTACCCCCCCATGCCCTACAACCCCAGGGATGATCTGTATGACCCGGCCCGCTTCCAGTACCCACAGCCGGCTGCTGCTGCCGATGAGCCTGCAGAGTCAGGCCACAGTcagtaaaaacatccaggatgtgTTGGAAGAAAGgtgtttttactttaaaataaaacagactGATTGAAAACATCTAAGTtgaacattttcatattttgaGAGATTTGAACATCTTGCAAATGCGAATACATGGAATACAACCTGTACTAAAGCAATGAAAAGCTGCAGTATTTGTTTAAACCTTGTTACATTGATAAATAACATCACTGTcgataagtaaaaaaaaatcagttttcaGTCCACCCAAGCATGTAATGCAAATTATAAATTT

Function

NR:

description
PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813204.1 True 1377 mRNA 0.52 5 27799826 27802336

Neighbor

gene id symbol gene type direction distance location
trnal-aag_2 NA coding downstream 20612 27779133 ~ 27779214 (-)
bod1l1 bod1l1,LOC107705061 coding downstream 29571 27756523 ~ 27770255 (-)
nkx3-2 nkx3-2 coding downstream 55744 27740794 ~ 27744082 (-)
rab28 rab28 coding downstream 64307 27705212 ~ 27735519 (-)
hs3st1 hs3st1,LOC102780858 coding downstream 318290 27478825 ~ 27481536 (-)
mcm7 mcm7 coding upstream 1022 27803358 ~ 27814189 (-)
LOC120566545 NA coding upstream 12949 27815285 ~ 27836229 (-)
LOC120567058 NA coding upstream 49351 27851687 ~ 27865367 (-)
LOC120566982 NA coding upstream 106584 27908920 ~ 27910963 (-)
LOC120566987 NA coding upstream 112742 27915078 ~ 27917448 (-)
G108353 NA non-coding downstream 26845 27772676 ~ 27772981 (-)
G108352 NA non-coding downstream 27755 27771851 ~ 27772071 (-)
G108351 NA non-coding downstream 41131 27757793 ~ 27758695 (-)
LOC120567396 NA non-coding downstream 403795 27394158 ~ 27396031 (-)
G108194 NA non-coding downstream 708151 27091382 ~ 27091675 (-)
LOC120566995 NA non-coding upstream 165728 27968064 ~ 27970362 (-)
G108422 NA non-coding upstream 178714 27981050 ~ 27981447 (-)
G108424 NA non-coding upstream 179622 27981958 ~ 27982329 (-)
LOC120566994 NA non-coding upstream 201198 28003534 ~ 28004849 (-)
LOC120566468 NA non-coding upstream 293312 28095648 ~ 28096127 (-)
aurkb fbxl12,LOC103367279,LOC104928693,LOC101076892,LOC103149573 other downstream 9615 27780132 ~ 27790211 (-)
atp8a1 atp8a1,LOC102786596 other downstream 421705 27269370 ~ 27378121 (-)
LOC120567151 bend4,LOC102786006 other downstream 537125 27252395 ~ 27262701 (-)
LOC120566767 NA other downstream 703929 27068521 ~ 27095897 (-)
G108191 NA other downstream 733879 27065418 ~ 27065947 (-)
LOC120567057 NA other upstream 35232 27837568 ~ 27839107 (-)
LOC120566991 NA other upstream 149920 27952256 ~ 27955694 (-)
G108433 neto1,LOC101071133 other upstream 219401 28021737 ~ 28023229 (-)
LOC120566547 NA other upstream 222234 28024570 ~ 28038700 (-)
fam13b fam13b,LOC102777128 other upstream 912527 28714863 ~ 28795508 (-)

Expression


Co-expression Network