eif4ebp3l (eif4ebp3,LOC102306235)


Basic Information

Item Value
gene id eif4ebp3l
gene name eif4ebp3,LOC102306235
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 1546383 ~ 1550627 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813222.1
GCTGCCTGCTACAAATACAGCACATGGTAGCTGCTTGTAGAGACGGAGAGCAGCGGGCCCCAAACTCTCAACTTGTTTGAATAATCAGTTTACAAGTTGAagttatttaacttttactttGGTAACTGTtagttgtgtaaaaaaaaaagaaaaaaaaaaaaccctacaACTTTGATTTCGTTTGTCTTTGTGCAAGGCTGCGCGCGAGCGTTACATAGCGAGTTTGAGGACTTTGAATAACACTCCGCCTGCAGCAGCCCAGCAGAAGCTAGCATGTCGACCGGGACAAATGAAGTTAAAAGCTGCCCTATCCCCACCAGGGTGGTCACCCCAAAGGACTGGTCCCAGATTCCCGACTGTTACAGCCAGACACCCGGGGGGACGCTCTTCTCCACCACCCCTGGAGGTACCCGCATCATTTACGACAGAAAATTTCTGTTGGATTGTCGAAACTCCCCTCTTGCCCGTACCCCCCCATGCTGTCTGCCCCAGATCCCAGGGGTAACAGTACCTGCTACGCACCCCATGGGAAAACTGCAGGATCTCAAGGAGGAGGCtgaggaagaagaaaaggaCATTGCAGATGACAACCAGTTTGAGATGGACATCTGAGTTCCAGTATTACCTCCTGTGGAGAATTATTAGTTAAAACGCCTCCAAGGTCATTAATGACTGTAATGCATTacatttaaagctttttttttttttttttttttttttttaaataaaagcttTTGTGAGGAACCAAAAAGAATGGAATAGTTGGAAAACGATAGGGTGTTTTTGACCCTAAGTGTGTTAAGCAAAGAAATGGTCTGATTGGTCACTTCAGAGCTGCAGCAGGATTGAAAAATCCATtttgatttaactttttttaatcttttgtaaATAACATTGTACAATGTAGCCTATTTTTTAAGTTGGGGAATATAAGATGATTACATTAAGACATGTAGAGTTTTTCACTGCAGGCATCAGTTGTTTTGTtgtatccccccccccaaaaaaaagaaaattagatGGCtaactttctttgtgttgggcAAACAAGTGTCTCCTAATATTGGGGGTCAGGGCCTTCTGAAAATCAGCTCCTACTCTGTTTTGTACGGAGGGAGAgcttaaatgtgaataatttcaATTAAAGGCTATTCAGACTGTGGGcaattgtt

Function

symbol description
eif4ebp3 Predicted to enable eukaryotic initiation factor 4E binding activity. Predicted to be involved in negative regulation of translational initiation. Predicted to act upstream of or within negative regulation of translation. Predicted to be active in cytoplasm. Is expressed in hypothalamus and pancreas. Orthologous to human EIF4EBP3 (eukaryotic translation initiation factor 4E binding protein 3).

NR:

description
PREDICTED: eukaryotic translation initiation factor 4E-binding protein 3

GO:

id name namespace
GO:0045947 negative regulation of translational initiation biological_process
GO:0008190 eukaryotic initiation factor 4E binding molecular_function

KEGG:

id description
K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813222.1 True 1172 mRNA 0.42 3 1546383 1550627

Neighbor

gene id symbol gene type direction distance location
LOC120566654 NA coding downstream 5891 1529411 ~ 1540492 (-)
med7 med7 coding downstream 764591 779637 ~ 781792 (-)
lonrf1 lonrf1,LOC103354679 coding downstream 768060 753522 ~ 778323 (-)
LOC120567100 LOC104949038,LOC103355705 coding downstream 1083356 460923 ~ 463027 (-)
LOC120567087 LOC103355704,LOC104949036 coding downstream 1085812 458620 ~ 460571 (-)
nxt2 nxt2 coding upstream 23765 1574392 ~ 1576708 (-)
LOC120566744 NA coding upstream 199146 1749773 ~ 1767408 (-)
LOC120566745 LOC102312462,LOC100702004,LOC101465591,LOC103361369 coding upstream 217911 1768538 ~ 1783651 (-)
LOC120567293 NA coding upstream 241001 1791628 ~ 1795122 (-)
arhgef9a arhgef9,LOC102797990 coding upstream 248777 1799404 ~ 1862112 (-)
G102573 NA non-coding downstream 281181 1264792 ~ 1265202 (-)
G102487 NA non-coding downstream 338655 1207326 ~ 1207728 (-)
G102485 NA non-coding downstream 343827 1202073 ~ 1202556 (-)
G102467 NA non-coding downstream 577324 964250 ~ 969059 (-)
G102463 NA non-coding downstream 640142 905928 ~ 906241 (-)
G102606 NA non-coding upstream 1886 1552513 ~ 1552989 (-)
G102607 NA non-coding upstream 2700 1553327 ~ 1553542 (-)
G102609 NA non-coding upstream 5229 1555856 ~ 1556436 (-)
G102621 LOC104967683 non-coding upstream 43208 1593835 ~ 1601535 (-)
G102638 NA non-coding upstream 83967 1634594 ~ 1662199 (-)
insb LOC101469513,LOC102789752 other downstream 704765 838946 ~ 841618 (-)
tmsb2 NA other downstream 1077933 466290 ~ 468450 (-)
G102276 NA other downstream 1314939 220592 ~ 231444 (-)
sh2d1aa sh2d1a,LOC102800107 other upstream 626240 2176867 ~ 2197918 (-)
slc7a2 slc7a2,LOC102301583 other upstream 1174833 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 1340343 2890970 ~ 2898545 (-)
LOC120567496 NA other upstream 1345544 2896171 ~ 2896313 (-)
guf1 guf1,LOC102797887 other upstream 2073532 3624159 ~ 3642640 (-)

Expression


Co-expression Network