pttg1


Basic Information

Item Value
gene id pttg1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 25284705 ~ 25290134 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813252.1
CAGCGACCAATAGGACGAAGGCGGTGAATTTAAAAAGGAGCCGGTGGCGTCACAACATTTTCAGACCATAACAACTTTCTTGTCTGAGAGGAGAGCAGTCAACGGCGTTAGCACACCTGATCGAGATAAAATGGCTGACATAATCTTTGCAGAGCGGGAAAATGCATGTCTTTATCCACCTACTCTGAAGATGCGACAGCGGCTTCAGTCTGCTCCAGAGAAACTCATATCTCCTATGACTGCCAATACCTTACACACTCCTCTGCCATCTGGTCGTAAGGTTTTTGGTGCTGTCAACAAAAAAATCCTAACCCCTGCTGTCAACCCACAAGAGAAGAAACTCTTAAAGCCACAGGAAACTAAAGTCAAACAGGCTTCAGGCCAAAACTCCAAAGTGGAGGAATATCCAGAAATTGAAAAGTTCATCCCTTATGACCCACTAGAGTTTGAAAAGTACAGCATACCTGAGGATTTGATTCCTCTCAGTAGCTATGCGCTGCCTGGACTGGCCTGTTTCCCTCAAGCTCCACATCTGTGTGAGGAGGACCTGGAAATGATTGCTCCACTCCCAAACCTGTCACCTGTAAAGATGCCAACACGTTCAGGTCATTGCTCAGAGCTGGATGCCTTTCTTCAAACACTCGATGAGCTGACTGTTGAACTTCCTCCAGAATCTTTTATGGACTGAATGTTGATGCATGTTATAAGTTTTTACTGAAATAAAGGTTGTTTTTTAGATCTG

Function

NR:

description
securin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813252.1 True 742 mRNA 0.45 6 25284705 25290134

Neighbor

gene id symbol gene type direction distance location
sowahd NA coding downstream 140 25282801 ~ 25284565 (-)
zbtb33 zbtb33 coding downstream 27073 25252765 ~ 25257632 (-)
atp1b4 atp1b4 coding downstream 46091 25233186 ~ 25238614 (-)
mcts1 mcts1 coding downstream 84190 25198318 ~ 25200515 (-)
urp1 NA coding downstream 95256 25186589 ~ 25189449 (-)
ube2a ube2a,Ube2a,ube2al,LOC103150206 coding upstream 26164 25316298 ~ 25320522 (-)
tnmd tnmd coding upstream 76036 25366170 ~ 25432527 (-)
zgc:101583 LOC103366979,LOC102198838,LOC100710928,LOC102783729 coding upstream 1188757 26478891 ~ 26483763 (-)
med12 NA coding upstream 1197038 26487172 ~ 26517479 (-)
wu:fb13g09 LOC103367058 coding upstream 1228681 26518815 ~ 26569298 (-)
G107923 NA non-coding downstream 98227 25180938 ~ 25186478 (-)
G107907 NA non-coding downstream 210873 25073181 ~ 25073832 (-)
G107903 NA non-coding downstream 303908 24977124 ~ 24980797 (-)
G107890 NA non-coding downstream 393989 24890301 ~ 24890716 (-)
G107889 NA non-coding downstream 399278 24885009 ~ 24885427 (-)
G107992 sept6 non-coding upstream 1483 25291617 ~ 25297266 (-)
G108031 NA non-coding upstream 358400 25648534 ~ 25648780 (-)
G108036 NA non-coding upstream 389958 25680092 ~ 25680437 (-)
G108040 NA non-coding upstream 484448 25774582 ~ 25774823 (-)
G108082 NA non-coding upstream 1161676 26451810 ~ 26452058 (-)
ndufa1 NA other downstream 19841 25263172 ~ 25264864 (-)
trnav-uac_15 NA other downstream 422521 24861970 ~ 24862184 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other downstream 705606 24573441 ~ 24579099 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 1295804 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 2097647 23184192 ~ 23187058 (-)
diaph2 NA other upstream 547196 25837330 ~ 26258199 (-)
rpl36a LOC106604455,LOC100304549,LOC100219516 other upstream 1167861 26457995 ~ 26460732 (-)
G108181 LOC103390578 other upstream 1699130 26989264 ~ 27001011 (-)
G108191 NA other upstream 1775284 27065418 ~ 27065947 (-)
LOC120566767 NA other upstream 1778387 27068521 ~ 27095897 (-)

Expression


Co-expression Network