smyd5 (smyd5)


Basic Information

Item Value
gene id smyd5
gene name smyd5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 27204954 ~ 27214981 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813353.1
TGGAGATAAAACGTCAGTGTCAGAGTTGAAAGGACAAAGGTCGTCACTCAGAAACATGGCTGCTCCCCTGGATGACATGTTTTCCTACTGCGTGGACCCCGGTAAAGTGTCCACCTGTGTGGATGTACGATTTATAGACAATATTAAGGGTAAGGGTCTCTTCGCCAAAAAGAGCATCAAGAAGGGAGACACCATTTTTTTTGAACGGCCTCTGGTCTCTGCCCAGTTCCTGTGGAATGCTTTGTATAAATATAAAGCCTGCGAGTACTGCTTACGTGCTCTGGAGACTGCAGAAGAGAATGCCAGGAGACTAAGTGGCATCCCTGGACTAAGTCTTCCTCACCCGGAGCTCTGCCGTGTTCGACCAGAGCTGCACCAAGCCTGCCCTCAATGCCAGGTGATGTACTGTAGCAGCGAGTGTCGACAAGCTGCAGCTGATCAGTACCATCGAGTTCTGTGTTTGGGTTCCTCCCAGGACGATCCGGACCACCCCATCAACAAGCTGAAAGACGCATGGagGAGTATGCATTATCCCCCAGAGACCTCCAGCATCATGCTCATGGCCAGAATGGTAGCTGTGGTCAAACAGGCCAAAGACAAAGCACCCTGGCAGAAGCTGTTTTTGCACTTCTGCAGCCGGACAGGtaatgaggaagaggagatcGCCCATAAGCTCCTGGGAGAGAAGTTCAGAGGGCAGCTGGTCTTGTTGCACAGCCTTTTTAAATCAGCACTTTATGATGAGCATCTGAGTCGGTGGTTTGTCCCTGAGGGTTTCCGCTCTCTGTTCGCTCTTGTGGGAACCAACGGACAAGGCATTGGTACCAGCTCCTTGAGTCGGTGGGTTCATGCCTGTGATGCACTTGAGCTTCCTGCCCAGCAGAAGGAGCAATTGGACTCTTTTATCGACCAGCTATACAAGGACATTGAGAAAGaaacGGGAGACTTTCTAAACTGTGAGGGTTCTGGACTTTTTCTGCTTCAAAGCTCATGTAACCACAGCTGCATGCCCAACGCAGAGGCGTCCTTCCCCGACAACAATTTCCTGCTTCAGCTCAGTGCCCTTAGTGACATCAACCCAGGAGAGGAGATCTGCATCAGTTATTTGGACTGCTGTCAGCGGGACCGAAGCCGTCATAGCAGACACAAAATTCTGAGGGAGAACTACCTGTTTGTCTGCTCGTGTCCAAAGTGCATCTCCCAGATGGATGAGCTGGACGTGAcatcagaggaggaagaggaagaagaaggcgAGGCAGAAGGTGAAACCGAGGGGGATGAAATGGAAGATGAGATGACAGATGTCTGATGAAAGACTTCCCCATATTGTTCTCAGCCGTTCCCTTTCCTGCCACCGCGCTAAGCAACCTAAGGAATAAAGAACAGTTCAAACCATGATCTGCATTTCACCAGAACTGTCCAAATTTGTGAGAAATATCTTATCAATGCATTCCACTCATTCTTTGTCCAGTTTTAGAGATCAGCCACAGAACACGGTGTGTCAGTATTGGGGcagtgacagttttttttgtttttgctttactTCAGCACACTGAGGGGTTTGAATAAATCAAACACTATAACTTTCAGGCTTTGTGGGTGAACAGATAAGGATTGGtaggtgtatttttttattttattttattttttttacacttggGGACTATGTATAAAAAGGCTGACATTTCTAAACAGTTTATTAAATGTGGATGTAAACACCTTTTTTAAATCtacattaattaaaaaacattctagccacttgggggcagcaccACAAGTTGTAATCTTTGATAAATCACCTTATTAAAGAGTAAACAAACACCCCTTGAAAATCTTCTGCTCTACAATGGTTGAATTTCTCACCTTGCTACAGTGATGTACAGGTGTACTCCAGTACACCGTGACATCATCGTTGGGTGTGGTTACAGGTGCAACACGAGCACATTTCTGACTGCACCTAGCTGGAAATAACACTGATGACAGCGAAGAGAATGACTcaaaacagtaaaaaacaatgagctgaaggAGTCTAAAAAGCTGAGGGTAACTGCAACTTTAAATTAAAGCTGAAAGTCAGTATTTTATCATAGAGCTTTGATTCTCTGCCAGACCCAGACCAGGCTGTTAATTTCCCCAAATTCCCCCGGGGTTTTAATCGCGGCAGGTTCATGCAAAATCCccgtttaaattttttttttttatgtttgtgtaccACTGTGTGTGACTGCCATCTTCTATATCTAGTCAACTTACACGcatggataaaaaaaagaagcatacTGGTAGAGAATATTGACTTTTGTctcaatttattttttgctgctGTTCGAAAATCATGACCGTGACAGCAGTTGCCTATTTCACTGTGTCTGACCTTCAGGTCCACTAAAGTCAAAGAAGAACTGTTATTTCTTGTTCTTGTCAACTCTTCAACAAGGCAAAGTAATTAAGCAGAGGTCAATTGGTTCTCAGGTGTTTTTCTCCACTTAAGTTTCTTACATGACTTTGTGTTACTGCGTTGAACAGGCTTTTTATTTACTCTCCGTTGTAATTACACTCTTGTCATATGGGAGGAATCCAGCCAGTGATGAAATATAGTTTGGTTTTCATACAATGATCTATGGGGTTAAGTTAAACCTTACTTAATGTATTATAGAGACCTTGAGTGGAAAATTGCTTTGTCAGTAACTGTTTGCCCTTTGTTGAGAACTGTATTTCAAACCGCAGTTCCACATGAGTGAAATTGCTGCTGCCCACACATGAATCAATATTAAGACTGTAATCACAAATCCCATTaatttctaaaaaaaacttGCTAGACAAAGATTGGGATTAGTCATTCaatattttcaaagttttcagtTGGCATTCAGCGCAGTGGCACAGGAGAACATGGCTTTGTGAGTTACACAAGTATGATTTAAAATAACAGCAGCAAACAGGAGCCTAGCATTGTTGTTTTTACTACTCTAGCATAAACCATTGAAATTGAATGTCTGTTAAGTCATTCATCAGGTTTACACACCTCCTGCCTTTGCTACTGAAGACTGTACTGGTAAAATATTTGTTCTGTCTTTGCATATTAAATACAAATCCTTTA

Function

symbol description
smyd5 Acts upstream of or within definitive hemopoiesis; negative regulation of myeloid cell differentiation; and primitive hemopoiesis. Is expressed in several structures, including digestive system; eye; heart; integument; and pleuroperitoneal region. Orthologous to human SMYD5 (SMYD family member 5).

NR:

description
PREDICTED: SET and MYND domain-containing protein 5

GO: NA

KEGG:

id description
K24635 SMYD5, ZMYND23; SET and MYND domain-containing protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813353.1 True 3100 mRNA 0.43 13 27204954 27214981

Neighbor

gene id symbol gene type direction distance location
gfra4b LOC103367360,LOC104958665,LOC100709061,LOC102195730 coding downstream 26393 27132673 ~ 27178561 (-)
LOC120566770 NA coding downstream 290290 26910920 ~ 26914664 (-)
enox2 enox2,LOC100709872,LOC102784575,LOC101473670,LOC102307254 coding downstream 436021 26576934 ~ 26768933 (-)
wu:fb13g09 LOC103367058 coding downstream 635656 26518815 ~ 26569298 (-)
med12 NA coding downstream 687475 26487172 ~ 26517479 (-)
sfxn5b sfxn5,LOC100712369,LOC102194966,LOC101471447,LOC102299301 coding upstream 875 27215856 ~ 27233287 (-)
LOC120567138 rab11fip5,LOC106925811,LOC103471510 coding upstream 19701 27234682 ~ 27250177 (-)
slc30a9 slc30a9,LOC103367187 coding upstream 181389 27396370 ~ 27408837 (-)
gsr gsr coding upstream 195583 27410564 ~ 27420419 (-)
LOC120566264 NA coding upstream 217360 27432341 ~ 27445047 (-)
G108194 NA non-coding downstream 113279 27091382 ~ 27091675 (-)
G108186 NA non-coding downstream 168869 27035515 ~ 27036085 (-)
LOC120566771 NA non-coding downstream 171787 27023653 ~ 27033167 (-)
G108182 enox2,LOC106949969,LOC107093408,LOC106918471,LOC106514441,LOC107379070 non-coding downstream 196917 27007812 ~ 27008037 (-)
G108179 NA non-coding downstream 241371 26963266 ~ 26963583 (-)
LOC120567396 NA non-coding upstream 179177 27394158 ~ 27396031 (-)
G108351 NA non-coding upstream 542812 27757793 ~ 27758695 (-)
G108352 NA non-coding upstream 556870 27771851 ~ 27772071 (-)
G108353 NA non-coding upstream 557695 27772676 ~ 27772981 (-)
LOC120566995 NA non-coding upstream 753083 27968064 ~ 27970362 (-)
LOC120566767 NA other downstream 109057 27068521 ~ 27095897 (-)
G108191 NA other downstream 139007 27065418 ~ 27065947 (-)
G108181 LOC103390578 other downstream 203943 26989264 ~ 27001011 (-)
rpl36a LOC106604455,LOC100304549,LOC100219516 other downstream 744222 26457995 ~ 26460732 (-)
diaph2 NA other downstream 946755 25837330 ~ 26258199 (-)
LOC120567151 bend4,LOC102786006 other upstream 37414 27252395 ~ 27262701 (-)
atp8a1 atp8a1,LOC102786596 other upstream 54389 27269370 ~ 27378121 (-)
aurkb fbxl12,LOC103367279,LOC104928693,LOC101076892,LOC103149573 other upstream 565151 27780132 ~ 27790211 (-)
LOC120567057 NA other upstream 622587 27837568 ~ 27839107 (-)
LOC120566991 NA other upstream 737275 27952256 ~ 27955694 (-)

Expression


Co-expression Network