sfxn5b (sfxn5,LOC100712369,LOC102194966,LOC101471447,LOC102299301)


Basic Information

Item Value
gene id sfxn5b
gene name sfxn5,LOC100712369,LOC102194966,LOC101471447,LOC102299301
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 27215856 ~ 27233287 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813354.1
AGTGATTTATTGTTCCACCTTTGAATGGGTGCATCAACTGTTATCTCTCCCAAGATCAATCCGAACAGTTATGCAACAGATTTTTACCTTATCGATTATTTGGGATGTGTAGTCATGCGGTTCAACATTGCCAGTGTTCACGCAAAATAGAAGACTACACATCCCGACAGACGGAGCGGCTCGTGCTTCACTAGTTACACATTGAATGTAGTTCGCTCTAACGTTACTTGAAAAGCCGTTCATGATTCActtcattaataaataaatagtttcgGTGTCATGGCGGAATCTGCAGCATGTCCTGCCTTCCAGCTTGGAAGACCCCGATACGAGCAGGGTTCATTCCTCGGTCGACTGAGACACTTCGTAGACATCATTGACCCCAGCACTCTGTTTGTGTccgagAAACGATTGAAAGAATGCATGAAACTACTTGATGACTACAAACATGGCGAGCTTCCACCTGGAGTATCTGATCTTCAGCTGTGGGAAGCCCAGAAGATCAAGCAGGCCATCATTCATCCTGACACAGGAGAGAAGATCTTCATGCCATTTCGAATGTCAGGTTATGTCCCATTTGGAACGCCGATTGTCATTGGCCTTCTTCTCCCAAATCAGACTGTGGTGTCTACCATTATATGGCAGTGGCTGAACCAGAGTCACAATGCCTGTGTGAACTATGCCAACCGCAACGCCACAAAGCCTACACCAACATCCAAGTTTCTTCAAGGCTATGTAGGAGCTGTGACCAGTGCCGTTTCTATCGCAGTGGGACTGAATGTGTTGATTCAGAAGGCTAACAAGCTGAGTCCTGCCACCAGAATGATAATACAGAGACTCGTCCCCTTCCCAGCTGTAGCTTGTGCAAACATCTGTAACGTGGGCCTGATGAGACACAATGAGCTGTCTGAGGGGATTGATGTGCTGGACAGCAACGAGAATGTGGTGGGATCCTCCAAAATTGCTGCAAGACATGCGATCATGGAGACCGCCTTCACACGTGTGGTCCTCCCGATGCCGATCTTTGTCCTGCCCCCCATCATCATGTCCTACCTAGAGAGGCTGCGATTTCTGCAGAGCAACCGCAGATTGTTGCTGCCCATCCACAGCCTGGTGTGCCTCGTTACCTTCGGCCTCTCCCTGCCTGTGGCCATCAGCCTGTTCCCCCAGATGTCTCAGattgaGGTGTCTTGCCTAGAGCCGGAGATCGCCATGGCAACAGATTGCAAGGTGGTGACCTACAACAAGGGTTTGTGATGGATGGCGTGGTGTGAAAGAGGAGAGCAGAGGACGGGAGCGAGGATGGAAATGAGGCTCCATTGTGAATAGCTGTCAGGGATAACCTACAGTGGGGGTCTTTCTGCCGCAGTATCACAGCAGAGCCTGTAGACCTTCTTCTACTAAcacagggtttttttttgtttacggaTCTCAAGATCCAGCAATCAAGGTTTGAAAATAGGACAGATTTTTTCTGTCCTCACTGTCTTCAAGAGCAAAGAAGAAGCTCTGTATATAGATATTACgatatacagtatttactgtgaaatcagttgtttttttttagcattaatggaattattttaatatatacaaaacagtgtttcccacacgcTATACAGTACTTTGCTTCCCACTCAAGGTTTGGCTGCTTTTTCACCCAATGACAAATGCagtttaaacctgcaataactgatTTGTTCTGGCTCTcttgctgctaaatgctccactgggTTCAGCAAGTAGTCTAACTGTGTATGTGATCAGGTTAGTGCAGTGTTTTTTGAAATAGCTTTTTTTGCTGCCTGTTTGGCCTCGCTGATGAGAGCTGTGACAGTGAACCAACACAGTAAAATGGCAGCTAGATAACAAAATCAGGGTGGTGAGAGGAAGTGAGGGTGGCTAAGAACATCATTTTGTGTAGCTGAAATGTTAATCATGTTAATTATCCTACAGATAAATCTTGCGACCACAAGATTAGAACCATTGTCCAAAATCTACAATTCTGCAGCCCTTTCTGAGTTTGATTCATGACCAATACTGAAATTCTGAGGCTGATAACAGATAACGATATACAAGCCAACATTAATTTCCTTACATAAACTGTAATAAAGAATTTTGACTGGGGGTATGTACTGAGCCATTTTAcagttaaacaaaaagaaaaactcatCAGTGCCCTCTGTTGGACAAACTAGAGAGTAAACGTAATGGGGACCATCCCCTCTTTTACGTTTGGACATCCTCAATTCCTTTCCTCGGCTCCTCTCCTTACGTCTTGGTCTCTCCCACCTGAGATGTGAGTAGAGGAAGCAGAAGAGTCGAGGCCACAGGCATTTAACAAAATGAGACGTCCGTGCTTCAGAGCCGTCATTTTAAAGCAACGTCACTTAAATGTGACGTGTGGCACAGCTGCCATGGTTTGTATACCCCAGCTGTGTCATGCCTCTTTTATGCGTCACGGGTGTCGAAAATACTTCCACAAAGGATATACTCGTGCATCCTCGCTCAAGCTTGTCTGGCAAGCCTCCTCTCTCCTCGCTCCTCAAGATGCATTTTAGGAATTGAGGCATCCATTAAGATGGTGCGCTGAGATCAATTTGTGATTCACAGGCCCAAAGACGGAGGAGACTAGGAGTCACGAAATAGAGAAATGAGAAGATGTTCATATTTGTAAATTATGTTTACTTTCTGAACTGCCATTACTTGTTACTTGAAGGTCGTCAAAATATGCTGATCCTGATTTATCTGCAATAAGCTAATATTGGCTGATACATATCGGCACAACCGATTTATCAGTCAGGCTCTCGTCTGCTTTATTATTGTGATGGAGACAGTTGACAGAAGGAGCTTTGAGGGAAAGCTTCTTGCAAAGTATATTTTtgacctgtgggaaacactgcaatagatatcaaaataaaagtgttAGAAATCTCTCGGGAACAAGTCTATTTATCATGTGAAGGTAGAGAAACTCTGCACTAACCAGGCTGCAGTGCTgatatatatattctgtatacTGAGGGAATGACAAAGGACTGAATCACTAAATGAAGCCACTGTCAGtggctgtactgtatatgtaaatgGGAAAATGTGGAGACCGTACTCTAGATGTACTTCACACGCTGTTTATCACATGCCGGGAATTTTAACCCCAATGTGAAACAACATACAGAAGCCAGGGCATTTTGTTTTCTACAATAGCCAAACACTTTACACtgacttattttatttaacattttactCCACTCCTAATTGTTTCTTAAACCACCACTGTATTCCTAGACTTCTTTTGTACAATATTTAAACCATAAAAGTATGAGCTATATATTATACTGAGTATGAACTagtatttttaatcttttgtatAACAACGTCTACTTCAAGTTTATTAAATGTTTGCTAGTCAAACaatgtaaaacaaacatttatatatattatctaaAATAATATCTAATAAATACTCTctccatttattttcttttgtgaaGACTTGATTTCCAGACCTACGCTTTGCTTCAGCTGTTTAGTGTTGCTATAGCATTGAGGCTTTCAACAGGATCATCATGGTTTTACTGTTTGCAccatttacatttgtttttatttattgtcaatACATTGGCATTTAGTTTTCTCATCACAAATTTAAtgttagaaaatgtt

Function

symbol description
sfxn5 Predicted to enable citrate transmembrane transporter activity. Predicted to be involved in citrate transport and mitochondrial transmembrane transport. Located in mitochondrion.

NR:

description
PREDICTED: sideroflexin-5 isoform X2

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006812 cation transport biological_process
GO:0016020 membrane cellular_component
GO:0008324 cation transmembrane transporter activity molecular_function

KEGG:

id description
K23503 SFXN5; sideroflexin-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813354.1 True 3666 mRNA 0.42 14 27215856 27233287

Neighbor

gene id symbol gene type direction distance location
smyd5 smyd5 coding downstream 875 27204954 ~ 27214981 (-)
gfra4b LOC103367360,LOC104958665,LOC100709061,LOC102195730 coding downstream 37295 27132673 ~ 27178561 (-)
LOC120566770 NA coding downstream 301192 26910920 ~ 26914664 (-)
enox2 enox2,LOC100709872,LOC102784575,LOC101473670,LOC102307254 coding downstream 446923 26576934 ~ 26768933 (-)
wu:fb13g09 LOC103367058 coding downstream 646558 26518815 ~ 26569298 (-)
LOC120567138 rab11fip5,LOC106925811,LOC103471510 coding upstream 1395 27234682 ~ 27250177 (-)
slc30a9 slc30a9,LOC103367187 coding upstream 163083 27396370 ~ 27408837 (-)
gsr gsr coding upstream 177277 27410564 ~ 27420419 (-)
LOC120566264 NA coding upstream 199054 27432341 ~ 27445047 (-)
hs3st1 hs3st1,LOC102780858 coding upstream 245538 27478825 ~ 27481536 (-)
G108194 NA non-coding downstream 124181 27091382 ~ 27091675 (-)
G108186 NA non-coding downstream 179771 27035515 ~ 27036085 (-)
LOC120566771 NA non-coding downstream 182689 27023653 ~ 27033167 (-)
G108182 enox2,LOC106949969,LOC107093408,LOC106918471,LOC106514441,LOC107379070 non-coding downstream 207819 27007812 ~ 27008037 (-)
G108179 NA non-coding downstream 252273 26963266 ~ 26963583 (-)
LOC120567396 NA non-coding upstream 160871 27394158 ~ 27396031 (-)
G108351 NA non-coding upstream 524506 27757793 ~ 27758695 (-)
G108352 NA non-coding upstream 538564 27771851 ~ 27772071 (-)
G108353 NA non-coding upstream 539389 27772676 ~ 27772981 (-)
LOC120566995 NA non-coding upstream 734777 27968064 ~ 27970362 (-)
LOC120566767 NA other downstream 119959 27068521 ~ 27095897 (-)
G108191 NA other downstream 149909 27065418 ~ 27065947 (-)
G108181 LOC103390578 other downstream 214845 26989264 ~ 27001011 (-)
rpl36a LOC106604455,LOC100304549,LOC100219516 other downstream 755124 26457995 ~ 26460732 (-)
diaph2 NA other downstream 957657 25837330 ~ 26258199 (-)
LOC120567151 bend4,LOC102786006 other upstream 19108 27252395 ~ 27262701 (-)
atp8a1 atp8a1,LOC102786596 other upstream 36083 27269370 ~ 27378121 (-)
aurkb fbxl12,LOC103367279,LOC104928693,LOC101076892,LOC103149573 other upstream 546845 27780132 ~ 27790211 (-)
LOC120567057 NA other upstream 604281 27837568 ~ 27839107 (-)
LOC120566991 NA other upstream 718969 27952256 ~ 27955694 (-)

Expression


Co-expression Network