mars2 (mars2)


Basic Information

Item Value
gene id mars2
gene name mars2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 26483695 ~ 26486831 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813372.1
GTGGGCATCGCCTGCTATCCAAGGATGAGGACCCCTTTTCGGTTTGTCACCAGAAGCTGTAAGGCTGTTCACAGACTGCAACAAAGCTCATTTCTCTCTCCAATTTCAGCTGTGTCGAGTCATCAGAGGATTGCTGTGTTGAGAAACACGAGCACCTATTTCTGCAAAGAAGACAGGAGTTACTACATTACCACTCCCATCTTCTATGTCAATGCTTCTCCTCATTTAGGACACTTGTATTCAGCTGTGATTGCTGACTGCTTACACAGGTACAAGCTACTTCAGGGCTTCAACTCAAAGTTTGCAACAGgcACAGATGAACATGGCTTGAAAATCCAACAAGCTGCTGAAGCTGCAGGAAAAGATCCCCTGACTTTCTGCACTGATGTATCTGAGAGATTCAAACATCTCTTCAACAGCTGCAACATATCATATACAGACTACATAAGAACCACTGAGCAGGCACACTGTCAGGCTGTAAAGCATTTCTGGTCAGTCCTCTGCAACAAAGGGCTCATCTACAAGGGGAGTTATGAAGGCTGGTACTCCACCCAAGATGAAAGCTTCCTAACAGCGTCGCAGGTGGGCGATGCTTGGGACTCATCAGGGAAGGAGATCAAAGTATCCCTGGAGAGTGGCCACAAGGTGGAGTGGATGAAAGAGGAGAACTACATGTTCCGTCTGTCTGCATTTCGGTCTCAGCTGCTTGACTGGCTCAGAGGAAATCCCCGGGCCATACAGCCTGAGCGTTTCTACCAGGCTGTCATCCAGTGGCTGCAGGAGGACCTTCCTGACCTGTCAGTCTCCCGCCAGAGAAGCCGCCTTCAGTGGGGCATCCCAGTCCCGGGTGATGCTGAACAAACCATCTATGTGTGGCTAGATGCTCTGGTGAACTACCTTACAGTAGCTGGCTATCCAGATAAATGCAGCCAATGGTGGAACGTAGCCCACCACATTGTAGGAAAGGACATCTTAAAATTTCACGCCATCTACTGGCCAGCTTTTCTTCTAGGAGCTGGACTGCCGCTGCCACAGACGATATATGTGCACTCTCACTGGACAGTAGGAGGAAAGAAGATGTCTAAAAGTTTGGGTAATGTGGTGGATCCTCTTGTACGCTCACAGATGTTCACAACGGATGGTATGAGGTACTTTCTTCTGCGTCAGGGTGTCCCAGACTCAGACTGCGATTACACAGACAACAAAGTTATCAAGCTGCTCAATGCAGAGCTTGCTGACTCTCTGGGTGGTCTGCTGAATCGCTGCACCGCTCCAGCTCTTAACCCAGCTCAGGTCTACCCCTCTTTCTGCCCTCAGTCCTTCCCAAGTCAACATGGAGGCAGGGCTGTGGTTGAAGACTACAACATGTTGGATGCTGTGAAAAATCTCCCTGCTGTGGTCGAGCAGCACTATGAAAGCATGCATGTATACAAAGCTCTGGAGGCCATCAGTGCCTGTGTGAGGCAGACCAACGGGTTTGTTCAGCGCCATGCCCCTTGGAAGCTGGATAGGAGGGACAGTAAAGACCAGCACTGGCTAGACACAATCATACATGTCTCCCTTGAATGCCTGAGGATTTATGGCACACTCCTCCAGCCAATAGTGCCAGAGATTTCTAACAAGCTGCTGTCAAGACTCGGGGTGCAACCAGGCGAGAGGAGCTGGGTGGATGTGAATTTCCTGCCAAGGTATCAAGGAATGGACTGTCCCTTTGAAGGGAGAGCGCTAGGATCGGACTCTGGAGTGCTTTTTAGTCGCTTGGAAAGTCAGAATATAGATAaacaaaaacctaaaaaaacaaaaaaggcagaacatttgaaatgaagttttttgtttcCTGTACTGTGTTTCATTGACATCTTTTTCACTGTTAGTTTTGCTGTAAACTGTCAGGGCGTCATTAATGTTATttgtaacacctgtgctttttcttATAAAGTCAAGTCAAAATGCCTGCATTGAA

Function

symbol description
mars2 Predicted to enable ATP binding activity and methionine-tRNA ligase activity. Predicted to act upstream of or within methionyl-tRNA aminoacylation. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 25 and spastic ataxia 3. Orthologous to human MARS2 (methionyl-tRNA synthetase 2, mitochondrial).

NR:

description
methionine--tRNA ligase, mitochondrial

GO:

id name namespace
GO:0006431 methionyl-tRNA aminoacylation biological_process
GO:0005759 mitochondrial matrix cellular_component
GO:0005524 ATP binding molecular_function
GO:0004825 methionine-tRNA ligase activity molecular_function

KEGG:

id description
K01874 MARS, metG; methionyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813372.1 True 1963 mRNA 0.48 3 26483695 26486831

Neighbor

gene id symbol gene type direction distance location
gla gla coding upstream 25783 26451784 ~ 26457912 (+)
glra4a LOC106949970,LOC101466695,LOC106920031,LOC106514543,LOC108231179,LOC103151720,LOC100711741,LOC103353264,LOC107377714 coding upstream 64731 26357802 ~ 26418964 (+)
pcdh19 pcdh19 coding upstream 835494 25594313 ~ 25648201 (+)
elf1 LOC104965894,LOC103353227,LOC102314295,LOC100712278 coding upstream 1120446 25321527 ~ 25363249 (+)
trnae-uuc_61 NA coding upstream 1162399 25321225 ~ 25321296 (+)
LOC120566768 enox2,LOC101473670,LOC100709872,LOC102784575,LOC102307254 coding downstream 357856 26844687 ~ 27069215 (+)
LOC120567492 NA coding downstream 653505 27140336 ~ 27140454 (+)
shisa3 shisa3,LOC102786300 coding downstream 776928 27263759 ~ 27267957 (+)
LOC120566438 NA coding downstream 934850 27421681 ~ 27426082 (+)
cops6 cops6 coding downstream 1303457 27790288 ~ 27796688 (+)
G108066 LOC100304549,LOC100219516,LOC106514001 non-coding upstream 23069 26459040 ~ 26460626 (+)
G108062 NA non-coding upstream 209907 26273588 ~ 26273788 (+)
G108043 NA non-coding upstream 644340 25837363 ~ 25839355 (+)
G108039 NA non-coding upstream 708907 25774521 ~ 25774788 (+)
G108037 NA non-coding upstream 790280 25693107 ~ 25693415 (+)
G108094 NA non-coding downstream 5541 26492372 ~ 26492997 (+)
G108163 NA non-coding downstream 453096 26939927 ~ 26940175 (+)
G108164 NA non-coding downstream 476449 26963280 ~ 26963585 (+)
G108165 NA non-coding downstream 481788 26968619 ~ 26968868 (+)
G108166 NA non-coding downstream 518318 27005149 ~ 27005354 (+)
timm8a timm8a other upstream 4398 26476796 ~ 26479297 (+)
btk btk other upstream 7125 26461288 ~ 26476570 (+)
sept6 sept6,LOC106945475 other upstream 1173477 25291607 ~ 25310218 (+)
rpl39 NA other upstream 1201488 25279568 ~ 25282207 (+)
LOC120567498 NA other upstream 1202615 25280948 ~ 25281080 (+)
grxcr1a grxcr1,si:dkey-109l4.6,LOC102787492,LOC106600617,LOC107601454 other downstream 900815 27387646 ~ 27393621 (+)
LOC120566985 NA other downstream 1489496 27976327 ~ 28046891 (+)
fgfrl1a fgfrl1,LOC104949359 other downstream 1996846 28483677 ~ 28558216 (+)
maea maea other downstream 2086836 28573667 ~ 28681112 (+)
gria2b gria2,LOC106611560,LOC106604527 other downstream 3719154 30205985 ~ 30282627 (+)

Expression


Co-expression Network