gla (gla)


Basic Information

Item Value
gene id gla
gene name gla
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 26451784 ~ 26457912 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813373.1
AACACGTTATACACGAGGAAATAGATCCAAATTCAAACACAGTCGCTCATTGGCATTGTTGTGCGGGAAGTGTCGAGTTTAAAAGTAACAATGTGCAGGTCCGTGTGTGTCCTCGCGCTCCTCGTCTTAATCAGCCCAACTGCTGAAGCGTTGGACAATGGTCTGGCGCTCAAACCCACAATGGGCTGGCTGCACTGGGAGAGATTCATGTGTAACATCGACTGTGACAAGGACCCCAATAACTGCATCAGTGAGCGTCTGTACATGCAGATGGCAGATGTGATGGTGAAGGAGGGCTGGAAAGAGGCCGGTTACGAGTACGTCTGCATCGATGACTGCTGGCCCTCCCACCAGCGCGATGCCCAGGGCCGCCTGCAGGCAGACCCCAAAAGATTCCCGGGGGGCATCAAGAAACTGGCCGACTATGTCCATTCTAAGGGACTGAAACTGGGTATCTATGCAGATGTGGGGAAGAATACCTGTGCGGGATACCCTGGCAGTCTGGGTTACTATGAGACAGATGCTCAGACGTTTGCTGACTGGGATGTAGATCTGCTCAAATTTGATGGCTGCTATATGGACTGGACCTTGGTTGGAGAAGGCTACGTCAACATGTCAAAAGCACTGAACAAAACCGGAAGTAGTATCCTGTACTCCTGTGAGTGGCCTTTGTATGAGTGGAAGTTCAAACAGCCCAACTACACAGCCATCCGCGAGGCGTGTAACCACTGGCGCAACTTTGCTGACGTGTACGACTCATGGAGCTCTGTCAAGTCCATCTTGGAATGGACTGCTTCTCATCAAGACATCATTGTCCCCGCGGCTGGACCTGGGGGCTGGAACGACCCCGATATGCTAGTGATTGGGAACTTTGGCCTGAGTCATGCCCAACAGGAGTCTCAGATGGCATTATGGGCCATCATGGCAGCCCCTCTGCTCATGTCTAATGATCTGAGGGACATATGTCCTCGCTCCAAGGAACTGCTGCAGAACAGACACATCATTGCCATCAGCCAGGACCCACTGGGCAAGCAGGGATACCGCACTGCCAAGGTGGACAGTTTTGAGGTGTGGGAGAGGACTCTGTCCCAGAACCGACTGGCCATCGCTGTCCTGAACCAGCAGGAGATTGGTGGTCCCCGAGGGTTCGTCATCAGAGCGGCTCCTGGCTGGAAGATCTGTAACCCCCAGTGTGAAGTCACACAGATCCTTCCTCAGTACAAGGAGCTGGGTGTTCAGACTCTACATACCAAAATGGTTGTATCAGTCAACCCCTCAGGCACTACTCTACTGACAGTCACTCCCATCGGCAGCGACATTACAGGGCTTAACAAGCTGTACTGGAGGGACTTATCTGTCAAACGTAAGCACACCACCACTTTGTAGTCCTCAGGTGGTTATGCACTTTATCTGCTTATACCATTGTGATTGAATTATAAAGAAGGTAAAGTGTTTTATAGTCTAGTTTGCTTGAATCAGCCTGGATACAATTACAGTACACCTGCTACCTTTTTATCATGTTGAATAAACTGGAAAATGTTGGAA

Function

symbol description
gla Predicted to enable alpha-galactosidase activity. Predicted to be involved in glycoside catabolic process; glycosylceramide catabolic process; and oligosaccharide metabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in lysosome. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in Fabry disease. Orthologous to human GLA (galactosidase alpha).

NR:

description
alpha-galactosidase A

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds molecular_function

KEGG:

id description
K01189 GLA; alpha-galactosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813373.1 True 1545 mRNA 0.51 7 26451784 26457912

Neighbor

gene id symbol gene type direction distance location
glra4a LOC106949970,LOC101466695,LOC106920031,LOC106514543,LOC108231179,LOC103151720,LOC100711741,LOC103353264,LOC107377714 coding upstream 32820 26357802 ~ 26418964 (+)
pcdh19 pcdh19 coding upstream 803583 25594313 ~ 25648201 (+)
elf1 LOC104965894,LOC103353227,LOC102314295,LOC100712278 coding upstream 1088535 25321527 ~ 25363249 (+)
trnae-uuc_61 NA coding upstream 1130488 25321225 ~ 25321296 (+)
nkrf nkrf coding upstream 1136353 25311039 ~ 25315431 (+)
mars2 mars2 coding downstream 25783 26483695 ~ 26486831 (+)
LOC120566768 enox2,LOC101473670,LOC100709872,LOC102784575,LOC102307254 coding downstream 386775 26844687 ~ 27069215 (+)
LOC120567492 NA coding downstream 682424 27140336 ~ 27140454 (+)
shisa3 shisa3,LOC102786300 coding downstream 805847 27263759 ~ 27267957 (+)
LOC120566438 NA coding downstream 963769 27421681 ~ 27426082 (+)
G108062 NA non-coding upstream 177996 26273588 ~ 26273788 (+)
G108043 NA non-coding upstream 612429 25837363 ~ 25839355 (+)
G108039 NA non-coding upstream 676996 25774521 ~ 25774788 (+)
G108037 NA non-coding upstream 758369 25693107 ~ 25693415 (+)
LOC120566339 NA non-coding upstream 799122 25650715 ~ 25652662 (+)
G108066 LOC100304549,LOC100219516,LOC106514001 non-coding downstream 1128 26459040 ~ 26460626 (+)
G108094 NA non-coding downstream 34460 26492372 ~ 26492997 (+)
G108163 NA non-coding downstream 482015 26939927 ~ 26940175 (+)
G108164 NA non-coding downstream 505368 26963280 ~ 26963585 (+)
G108165 NA non-coding downstream 510707 26968619 ~ 26968868 (+)
sept6 sept6,LOC106945475 other upstream 1141566 25291607 ~ 25310218 (+)
rpl39 NA other upstream 1169577 25279568 ~ 25282207 (+)
LOC120567498 NA other upstream 1170704 25280948 ~ 25281080 (+)
apln NA other upstream 1354761 25073213 ~ 25097023 (+)
nox1 nox1 other upstream 1604891 24840186 ~ 24846893 (+)
btk btk other downstream 3376 26461288 ~ 26476570 (+)
timm8a timm8a other downstream 18884 26476796 ~ 26479297 (+)
grxcr1a grxcr1,si:dkey-109l4.6,LOC102787492,LOC106600617,LOC107601454 other downstream 929734 27387646 ~ 27393621 (+)
LOC120566985 NA other downstream 1518415 27976327 ~ 28046891 (+)
fgfrl1a fgfrl1,LOC104949359 other downstream 2025765 28483677 ~ 28558216 (+)

Expression


Co-expression Network