dnajc4 (dnajc4)


Basic Information

Item Value
gene id dnajc4
gene name dnajc4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23346187 ~ 23351569 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813522.1
TATTTTGAAGGGTAAATCTTCAGTGTTCCGGTTGTAATCCAGCTAGCTTGATGCAGCTGAGTCAATACTGTCTATGGAGTCAACGGACCCACAGAACAGCTAGCTAGTTATGAAACTGAGTCCTGCTGCCAGTCAGATCACCTCTCAACAGATGAGGGGAAAGTTGCTGACAGCATCGTTTTCAATGGAAACACACTAGAAAGGTCCTCTGTGGGGAAACTCAGACTTTGTCCATCATGCATTTAGAGGCTCAGCTGCGTCTCTGTCAGAGTTGTCTGTGGGGCTGCAGGAGCGGGCTGCGCCTGCTCTCCCAGAGCTATGCACACAgAAAAGCTGTGAACTACTACAATCTTCTGGGAGTCAAATCTGATGCCTCCTTGGAGGAAataaaaaatgccttttttGACAAATCTAAGAAGCTGCACCCAGACAGCGACCCATCCAACCCAGCGCTGCACAGCCAGTTTGTGGAGCTGAACGAGGCCTACCGAGTGCTGAGCAAAACGTCGAGCAGGAAGGAGTATGACTTCAAAATCGGACATCCATACAGCGGGGGCCAGGCCTTCAGATCTGCCTCCAGTCACACCAGCTACAGATCTAGTACGGAGACCCAGGAGAACTTTCGTTACTGGGAGCAGTTTCGTCAGTCTCCAGCACAGGAGATGACGGCAGAGGAgtggcagaggaggaggaggagaaacttCCGCCTGGTGGGCTATTGCTTCATCACGATGGTGCTCAGCGTCGGAGCCCACGTAGTCTTCTTCAGGAAACTGGAAGAAGTTCACAATAACTTTATGGACGAAAAAGATCGAGTCATCACGGAAATTTACAATGAATCCAAAGAGAGGGCCAGGGCCAACGGTTTTAAGAAACAGACTGAAATCCTGCGGCAGAAACATGCTGAGTTTCTGGAGAAATACAAGATCCCCAAGGATGGAGAGGACAAGTAGGAGAGTCTCCAACTGTGCACTGTGATAATGGAGTTTCAAATGGCAGCAGGTGAAAGGCAGTGGACTGGATGTGGAACCTGCTTTAGGATTTTtagagtttttttatttatgtgaaaCATGTTAATGTGTTTGTCCTCAGTTGAGTACTTGAAGACACACAGAACATGGGTGTGATGTGGGAATGTTTCATCTGGTCATACAAGTGTTTCTTAGTGACCAAGCCAAGCTTGCACATCCGACTACACCGGTCTGTTGAAGCATTTATACCTACTGTGATGTGACGGTCATAAGGATCCGCCTACAGTATGTACACAAACCATAATGAACACTGTTCAAACTGCCTCTTATGAACTCACAGGAACATGCTATTTATTGTCCTCTGCCTCATTGCTGTTAGCGGGGCTCACCGATAACAGCATGAGTTGATCAAGTCAAGACGAGACAGACTAACTGTAATGCCAATATGTTTCttgctgaaaaaagaaaattgtattGATTAAAATCATATCCTGGGTTGCACACAAGAGGACGCTCCATAATGTTCTTTTAGGTTTGATGTAGTCTAGCatagccagacctatctccacaatACGTTTTAGTGCTGTGCCAGCGCTGGAGAAAGGTCCGCCTGAACCCATCATAATTAAGCACTAAGGGAAATAAACcacttgtttgtatttctttaaaccaatctcaaTCGTCTTGGGAGGCGCCAAGCCCAGGATGTAGCGACGGTGCCCTTTGCAAAACAGTGTCAGGAGGAGATTTGTGTCTGAAATAGGCAGCCAGTGGCAGGCTCATACGCACAGTCTACATCCCGTGAGTCAGACTAGGTTCGGTGAGACTGTTCGGGGGCGTGATTGAGGGGGGTGAAGTATGACACGTGCGAGTCAAACCGGTCGAAACATGCTACAATGCCTGTTAGCTGATCGCAGTTATGAATTTTGGGACATCGCTGTCAAACTCCTCACTGTTCCTTCTGTTGACCGTGTGTTGCTGTTTGAAATGCAACCCATAATAAAATGTCCTCCATTTGTTAGAAATGGAGTCAGAGAAGAAAATCAATATTATCACATGAAAAGAGTGACACACTAACTTATTTAGAGTCAAACTATTGTATTAATAATGAGACTGTGTGTCTCATGTTCACATTGAATACAAAGAAGTTTGCTGGTTATTTCAACATTTACCACTTTACCTCTGTTTTTAGATTAGAGATTGTTGTTGCCTTATCTATTCCCTGATGGGATGTCAGAGGGAAATGATTAAAAGATCAACTTTTTCTCATCAATCA

Function

symbol description
dnajc4 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DNAJC4 (DnaJ heat shock protein family (Hsp40) member C4).

NR:

description
PREDICTED: dnaJ homolog subfamily C member 4

GO: NA

KEGG:

id description
K09524 DNAJC4; DnaJ homolog subfamily C member 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813522.1 True 2247 mRNA 0.45 8 23346187 23351569

Neighbor

gene id symbol gene type direction distance location
vegfba vegfb coding downstream 1989 23328250 ~ 23344198 (-)
stx5a stx5 coding downstream 23230 23315838 ~ 23322957 (-)
si:dkeyp-115e12.6 LOC105026731 coding downstream 38124 23285319 ~ 23308063 (-)
kcnk4a LOC104959797 coding downstream 63531 23266914 ~ 23282656 (-)
trnaw-cca_12 NA coding downstream 180759 23165357 ~ 23165428 (-)
si:ch211-107m4.1 NA coding upstream 5848 23357417 ~ 23363363 (-)
zgc:153018 LOC104960669,LOC103374078,LOC100705753 coding upstream 12513 23364082 ~ 23368791 (-)
trnaf-gaa_66 NA coding upstream 22367 23373936 ~ 23374008 (-)
foxo4 foxo4 coding upstream 91983 23443552 ~ 23453056 (-)
cfl1 cfl1 coding upstream 141542 23493111 ~ 23500048 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding downstream 82288 23242037 ~ 23263899 (-)
G107282 NA non-coding downstream 121731 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding downstream 164470 23179692 ~ 23181717 (-)
G107220 NA non-coding downstream 372427 22928854 ~ 22973760 (-)
G107215 NA non-coding downstream 469728 22875496 ~ 22876459 (-)
G107610 NA non-coding upstream 440485 23792054 ~ 23792502 (-)
G107667 NA non-coding upstream 847930 24199499 ~ 24259346 (-)
LOC120566461 NA non-coding upstream 936580 24288149 ~ 24381312 (-)
G107742 NA non-coding upstream 1080432 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding upstream 1096552 24448121 ~ 24450769 (-)
rnaseh2c rnaseh2c other downstream 159129 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 169161 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 211402 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 352958 22990987 ~ 22993229 (-)
G107117 NA other downstream 653356 22691160 ~ 22692831 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 533019 23884588 ~ 23988901 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 1221872 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 1510401 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 1911603 25263172 ~ 25264864 (-)
G107989 NA other upstream 1928034 25279603 ~ 25288086 (-)

Expression


Co-expression Network