tmem33 (tmem33)


Basic Information

Item Value
gene id tmem33
gene name tmem33
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 31322365 ~ 31332549 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813544.1
CGCTCCTTCTCAAATCTCGCGAGAGACATTTTCCTTTTGAAGGCCAGCTGATAATTTCCTTCGGTGTGGTGACTAGCCTGACGCTTTTAAGTAAACGCGACGTTGACGCTGTAATACTGAGCAACCAACACTTCCAAAGATGGCTGACACAAACCAACAAAGTCCTCCTCCCCAGCTAGGGCCTGTGCAATTTTTAATGAGTAACAAGCTGGAAACTGCAATGTGGCTTTCACGACTCTTTACCGTCTATTGCTCAGTAATGTTTATTCTACCAATTTTGGGACCCTATGCAGCAGCTAACTTCTATCAGCGAGCCTTGTTGGCGAACGCCCTCACCAGTGCCCTTCGCTTGCATCAAAGGCTTCCACGCTTTCAGCTGAGCAGAGCTTTCTTGGCCCAGGCTCTTCAGGAGGATAGCTGCCATTACCTGCTCTACTCACTCATCCTGGTCAACTCCTACCCCATCACAATGAGCATCTTTCCAGTCTTCCTCTTCTCCGTGCTTCATGCAACTACCTACACAAAGAAAGTCCTTGATTCTGTGGGCCCcaacagcatgatgttcatcaGAAACCTCCTGGACAAACTTACATCCAATCAGCAGAACATCCTGAAGTTTATCGCCTGCAATGAGATCTTCTTGATGCCAGCCACTGTTTTTATGCTCTTTAGCGGACAGGGGAGCTTGCTGCTGCCTTTTATTTACTACCGATTCCTCACCCTCCGCTACACATCCAGAAGAAACCCATACTGCCGCACCTTGTTCACAGAGCTGCGAATTCTTCTGGAGCACTTCATCATGAAGCCTGCCTGCCCCACCTTCTTCAGGAAGATGTGCCTCAGCAGTATCGCCTTCATCAGCCGCCTCGCTCCCACAGGGGTCTGATTACTCcataaaagttctgttttttgttttgtttttttgttccaCCACTTAAGATGCGACTTAAACTTTGATGAGGACAGACATTGCCATCAACAGAAGGAACTGTTTTTTGAATGTCAACTTTACAGCCTGTGCTCCAACTTCTCTGTAAATGAGTGCAGTTGAAGAGCAGCCAGTAATGCACTGAAGTCTCATGGTGATATTTCCTTCCCATGTTCTTAATGTGACCTCATTCAAGCGGTGGACACCCCTAACTTTGTTACGTTCGCTGAATGCAGCACGGTAGACAACTGTGATCTGTATGTACCGGCTGTTATTTGTTCCTTTTTATGTCCTTATTTATTCATGAAATCACTTATTCTGTGATGAAACATTAACATTCTGAGATTAGtaacttaaattaaaatgtggttctacattgttaaaaatgtttgttttttttaatgatcatGTGCTTGGATGGGTGGAGGATGGGGTTTGTTTGCAGCTTCTATGTGGTCCAAcgtcttttatttcttttgtttaaagCATCCTATTATTTGATTTGTCTAAATGCCTAACTTTAAATGTATTCTATCAATGCCATCAACTCACTCTTTTAACAAATTAGATCTATGAAGGTATGAAGGTATGATGTCAAAATGGGTGTTGAATTGAGAAACAAGATATCTGCTGTATTTTTGAGAATATTTGAAGGTAACAGACATTTTGCTGTGGGATTCATATGTGAAATGAGTTGCACAATGCCTGTCATGTTTTCAATGCGTTCTTACTTGTTTCTCAGTTTGAAAGCTGTTTTGAATGTGcttcatttatttagttttcttgctctgatttatttttctgccatgttaaatgtgttttatttgcctaCAAACCACATTTTTATGACAAGAATAAAATGATCTCTTAATTAAAccaataaaatattaaagaagAGTAA

Function

symbol description
tmem33 Acts upstream of or within regulation of sprouting angiogenesis; regulation of store-operated calcium channel activity; and regulation of vascular endothelial growth factor receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Is expressed in pronephros and trunk vasculature. Orthologous to human TMEM33 (transmembrane protein 33).

NR:

description
PREDICTED: transmembrane protein 33-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K20724 TMEM33; transmembrane protein 33

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813544.1 True 1829 mRNA 0.41 8 31322365 31332549

Neighbor

gene id symbol gene type direction distance location
bbs7 bbs7,LOC102788539 coding downstream 1153 31315122 ~ 31321212 (-)
ccna2 ccna2,LOC101477005 coding downstream 9198 31309545 ~ 31313167 (-)
anxa5a anxa5 coding downstream 21870 31271226 ~ 31300495 (-)
fstl5 NA coding downstream 348080 30799237 ~ 30974285 (-)
LOC120566929 clg2h4orf45,LOC104948239,LOC102200624,LOC101472142 coding downstream 767176 30553176 ~ 30555189 (-)
pcgf1 pcgf1,LOC107589114 coding upstream 399428 31731977 ~ 31739944 (-)
fgf24 LOC104951404,LOC106525890,LOC103137301,LOC103363938,LOC105931924 coding upstream 451216 31783765 ~ 31795704 (-)
npm1b LOC103363949,LOC108236678 coding upstream 482443 31814992 ~ 31833319 (-)
cetn4 cetn4,LOC108438842 coding upstream 656339 31988888 ~ 31993101 (-)
nudt6 nudt6 coding upstream 679548 32012097 ~ 32025028 (-)
G108854 LOC102777869,LOC101473425,LOC102203600 non-coding downstream 86548 31220092 ~ 31235817 (-)
G108840 NA non-coding downstream 146906 31174863 ~ 31175459 (-)
G108828 NA non-coding downstream 190706 31130263 ~ 31131659 (-)
G108810 qdpr non-coding downstream 317879 31002648 ~ 31004486 (-)
G108785 NA non-coding downstream 588595 30733559 ~ 30733770 (-)
LOC120566353 NA non-coding upstream 42805 31375354 ~ 31380353 (-)
G108977 NA non-coding upstream 562694 31895243 ~ 31966892 (-)
G109007 NA non-coding upstream 661597 31994146 ~ 31996173 (-)
G109092 NA non-coding upstream 1457501 32790050 ~ 32827346 (-)
G109141 NA non-coding upstream 1583207 32915756 ~ 32961910 (-)
G108781 rapgef2 other downstream 651516 30669531 ~ 30670849 (-)
G108777 rapgef2 other downstream 660742 30660912 ~ 30661623 (-)
gask1b fam198b,LOC102776406 other downstream 965509 30346978 ~ 30356856 (-)
cxcl14 cxcl14 other downstream 2514371 28797298 ~ 28807994 (-)
fam13b fam13b,LOC102777128 other downstream 2526857 28714863 ~ 28795508 (-)
LOC120566409 limch1 other upstream 52541 31385090 ~ 31423481 (-)
LOC120566557 limch1 other upstream 87330 31419879 ~ 31485976 (-)
tlx2 tlx2,LOC107396138 other upstream 506993 31839542 ~ 31851757 (-)
hopx hopx other upstream 1458832 32791381 ~ 32893558 (-)
slc49a3 mfsd7 other upstream 1629488 32962037 ~ 32979661 (-)

Expression


Co-expression Network