LOC120566888 (LOC100695335)


Basic Information

Item Value
gene id LOC120566888
gene name LOC100695335
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 11970243 ~ 11997243 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813568.1
AGATACTGAAACAGTCCAGGATCTCTGACTCCAAGAGGATATTATTCATGTGTGAACCGAGAGAGGCATAGGAAGCCAACAAAATGCCCACAATCACTCTACCGCCGAAGGAGAATGCTCTCTTCAAGAGAATATTGAGATGCTACGAACACAAGCAGTACAGAAACGGCCTCAAGTTCTGCAAACAGATCCTGGGCAACCCAAAGTTTGCTGAACATGGAGAGACGCTGGCCATGAAGGGTTTAACCCTCAACTGTCTGGGCAAGAAGGAGGATGCCTACGAGCTGGTGAGACGAGGCTTACGCAACGACCTCAAGAGCCACGTCTGCTGGCATGTGTACGGCCTGCTGCAGCGCTCTGACAAAAAGTACGACGAGGCCATCAAGTGTTACCGCAACGCTCTGAAGTGGGACAAGGACAACCTGCAGATCCTGCGAGACCTCTCCCTGCTGCAGATCCAGATGAGAGACCTGGAGGGATACAGGgAGACGCGGTACCAGCTGCTGCAGCTCCGCCCGGCCCAGCGGGCCTCGTGGATCGGTTACGCTGTCGCCTATCACCTGTTGGAGGACTTTGAGATGGCTGCCAAGATTGTTGAGGAGTTCCGCAAAACGCAACAGaCGTCTCCAGACAAGGTCGACTACGAGTACAGCGAACTGCTGCTTTATCAGAACCAGGTTCTGAGGGAGGCGGGCCTGCACAAGGAGGCCCTCGATCACCTCAACAACTACGAGAAACAGATCTGTGACAAACTGGCCGTGGAGGAGACGAGAGgagagcTTCTGCTGAAGCTGGAGAGGCCCGAGGAAGCTTCCGATGTCTACAGCAGACTCCAGGAGAGGAACCCTGAGAACTGGGCCTACTACCATGGCCTGGAAAAGGCCTTAAAGCCAGgagGTGTAGAGGATCGTCAGAAGATTTACGAGGACTCCTGGGTGAAGTTTCCTAAAGGCCTGGTTCCCCGAAGACTGCCTCTTAGTTTCctcacagGGGAGAAGTTCTGTGAATGTCTGGACAGCTACCTGAGGATGAACTTCAGCAAAGGCTGCCCCCCCGTCTTCACTACCCTCAAATCCCTCTACACAGACAAAGCAAAGGTTACAACCATTGAAGACTTAGTAGTTGGCTATGAAACCTGTTTAAAAACCTGTCGAATGTTTAGTGAAAAGGATGATGGGAAGGAGGAGCCCCCTACCACCCTGTTGTGGGTACAGTATTTCCTGGCACAGCACTTTGACTTCATAGACAAACCCAGCCTCGCTCTGGAGTACATCAACGCCGCCATAGACAGCACGCCTACGCTCATCGAGCTCTTCCTCATCAAGGCCAAGATCTACAAGCACGCCGGCAACATAAAGGAAGCCGCTCGGTGGATGGACGAGGCTCAGGCCCTGGACACCGCCGACCGCTTCATCAACTCCAAGTGTGCCAAGTACATGCTGAAGGCCGGCCTCATCAAGGAAGCCGAGGAGATGTGCTCCAAGTTCACACGGGAGGGGGCGTCTGCAGTGGAGAACCTGAATGAGATGCAGTGCATGTGGTTCCAGACAGAGTGTGCCTTGGCCTACAAGGCCATGAACAAGTTTGGAGAGGCCCTGAAGAAGTGCCACGAGATTGAGAGGCATTTTGTGGAGATCACAGACGACCAGTTTGACTTCCACACCTACTGCATGAGGAAGATGACGTTGCGCTCCTACGTGGACCTGCTGAAGCTGGAGGACGTCCTGCGGCAGCATCCGTTCTACTACAGAGCTGCTCGGACCGCCATCCAGATCTACCTGGTCCTCCACGACAAACCTCTGGCTGACGACAGCAAGGAGAGCCAGGCAGACACCGaaaATCTGACAGACAAGGAGCTGAAGAAACTGCGCAACAAGCAGCGGAGAGCGCAGAAGAAGGCCCAGttggaagaggagaagaagaacgcGGAGAAGGAGAAACAGCTAAAGaaccagaagaagaagaaggaggatgatgatgaggagaTAGGCGGGCCAAAAGAGGAGCTGGTACCAGACAAACTGGCCAAGGTGGAGAATCCTCTGGAGGAGGCAGTGAAGTTCCTGATCCCTCTGAAGAACCTGGTGCGCAACAAGATCGAGACTCACCTCCTGGCCTTCGAGATCTACTTCAGGAAAGATAAGTACCTGCTGATGCTTCAGTCAATAAAGAGAGCTGTAACCATAGAGCCTTCCAACCCCTGGCTGCACCAGTGTCTAGTGCGCTTCTTCAAAGGAGtgcgtGAGAGTGCAGACTTGGCGGAGGCAGTAAGGACGGTGTTGAAGCAGGAGATCTCCAGGCTGTTTGGGGAGAGCAACCCTCAGAGCTTCAACAAGAACTACTTGAGCAAACACTCCAACTCCATCCCACACCGGACTGCAGCTGCTAAGATGATGGTGTACCTGGAGCCTTCCTCTGATAACATGGCCTGTGAGATCGCTACGGCCCTGGACGAGTCGCTGTCTGGAAGAGGCATCCAGatctgTACTGAGGTGCTGGAGGCTTTGCGTGACGGGCAGCTGGGCGAGGGCCAGCAGAAGGCTGCTGAGGCGTACCGATCCGCCTCAAAAGGTCTACCCCTACAGCCTGGCCTTCATGCCTCCCGGTTACCAAGACAACAACACTGCAGTCAGCGCCAACACGATCAGTGCCAACGGCGATCTGTCGGCAGGAGAGCACGACGACATGGCCAACGAAATGTGAGCTCGGACGAAAAGAGACGACgacgaggaggaagaggaggtgcGAACCTGCTGCCAGATGCCTTAGTCCGCCAACACACCCATTTCCCCaaaacccctccccccccctccagtCCCTGGGCTATGGCTGCTGTGTGTCGCCCCCCTACGTTGCACTGATCTGGATGGACTGAGCGCCGCAGGAGAGACAGGAAAGGGAGCTGGCACATGGAGGAAGGCGACGCCCatagaacttttttttaaacataaaaaatggcCCTGTCCACAGttgttctgtaaaaaaaaaaaaacagataaataTGGTATAGGGaggcaaaaaaaagaatctggGAAAAGTGGACATTGGATGGCTAAGATGACTCCTGTAAACACAGTCTAGGTTTTCTATAACCTGTGTTTTCACGCCATGTCCTTCTTGTAGGTGCATCTGCTTCTCAcgtttttaaaagtaatttatatATTACAAACTGACAAATGGATTAATAAAACAATGTTTGCAAAACCAAACGGTA

Function

NR:

description
PREDICTED: N-alpha-acetyltransferase 15, NatA auxiliary subunit isoform X1

GO: NA

KEGG:

id description
K20792 NAA15_16; N-alpha-acetyltransferase 15/16, NatA auxiliary subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813568.1 True 3214 mRNA 0.53 21 11970243 11997243

Neighbor

gene id symbol gene type direction distance location
ccdc142 ccdc142,LOC102789827,LOC108166651 coding downstream 43039 11900659 ~ 11927204 (-)
csnk1a1 csnk1a1,LOC102792316,LOC107742481 coding downstream 210486 11726952 ~ 11759757 (-)
LOC120566514 LOC106532362 coding downstream 757746 11210995 ~ 11212497 (-)
LOC120566513 NA coding downstream 848166 11120284 ~ 11122077 (-)
LOC120566512 NA coding downstream 1085693 10880776 ~ 10884550 (-)
nocta LOC104966628 coding upstream 76352 12073595 ~ 12088905 (-)
LOC120566266 NA coding upstream 753952 12751195 ~ 12760002 (-)
pcdh10b pcdh10,LOC104931883,LOC102788477,LOC101469434,LOC102291307,LOC101063520 coding upstream 1743926 13741169 ~ 13766184 (-)
mlsl LOC104935691 coding upstream 2100826 14098069 ~ 14119395 (-)
dnd1 NA coding upstream 2142117 14139360 ~ 14148826 (-)
G104604 NA non-coding downstream 19194 11945760 ~ 11951049 (-)
G104571 NA non-coding downstream 72569 11895623 ~ 11897674 (-)
G104564 NA non-coding downstream 111206 11849735 ~ 11859037 (-)
G104562 NA non-coding downstream 120521 11849302 ~ 11849722 (-)
G104560 stox2 non-coding downstream 127637 11840556 ~ 11842606 (-)
G104659 NA non-coding upstream 170590 12167833 ~ 12168153 (-)
G104664 NA non-coding upstream 276009 12273252 ~ 12274308 (-)
G104733 NA non-coding upstream 793225 12790468 ~ 12790707 (-)
G104737 NA non-coding upstream 935403 12932646 ~ 12932852 (-)
G104749 NA non-coding upstream 1108372 13105615 ~ 13105883 (-)
LOC120566907 magt1,LOC102791632 other downstream 2302292 9642540 ~ 9667951 (-)
G104258 NA other downstream 2331647 9637996 ~ 9638596 (-)
LOC120566283 magt1,LOC102791632 other downstream 2400317 9563999 ~ 9569926 (-)
abhd18 abhd18 other downstream 2512380 9355712 ~ 9457863 (-)
LOC120567361 NA other downstream 2792610 9167290 ~ 9177633 (-)
G104656 NA other upstream 145457 12142700 ~ 12143744 (-)
G104837 NA other upstream 2153249 14150492 ~ 14256041 (-)
uvssa uvssa,LOC104961899,LOC106533076 other upstream 2539857 14537100 ~ 14573493 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other upstream 2737949 14735192 ~ 14739493 (-)
rnf44 rnf44 other upstream 3092161 15089404 ~ 15108598 (-)

Expression


Co-expression Network