ints5 (ints5)


Basic Information

Item Value
gene id ints5
gene name ints5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22935020 ~ 22940305 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813611.1
ATTTCCCTTTTTCTAACGACGAAGAAGTTCCAACTTCCGGCTTTGGAGCGCCCTTTCGATGCATTTTTGTCCTGAAATTGGACAGATAATACAAGAAAAAGCTGCCATAATCGCTCACGTCGAAGCCCCGCAGCCGAGAGGAGGATTTGATGTGACgctttaatgttaaaagacCAAACGATGTCTGTGGTGTTGGACGGGAGTCCGCTGAAAGCGATGCAGagctcacacactcacacagcgcAGCCTGCCCTTAGCGCCCAGGAACTCTCTCAGGAGATCAAGTCCTTCATCAGTGGCGTTGACACCGTTCAGGGCCGAAAGCTCAGTGTCCGGGAACACGCCCGCTGTGCTGTGCGCCTGCTGCGCTCGGTCCCGGCCTGTCGAGGGGCGGTGCTGGAGCATCTGAGGGGCGTGTATGATGAGCACGTCTCGGCTTTCCTGCACAACCTGGAAACAGAGGGCGATGCCAGCTCCGGGGTCAGCTccaacctggaggacattatacagGAGGTTCATGGCGTGCTGTCAGAGTTTATTCGTCTCAACCCCCGGGCCTGGGCCCCTCTGGTATCCGCCTGGGCTGTGGACTTGTTAGGCCAGCTGAGCAGCAAGCACGCTGGCCGCAGGGTGGCCCCCCACTCCTCCAGCCTCAACGAGCTGCTCCAGCTCTGGATGTCCTGTGCTGCCACCCGGTCCCTCATGGAGGCCTACTCCCAGTGTTTGGCCGCCATGCTGGCCTGGTGCCCTGACGCATGTGTGGATGCGCTGTTGGACACCTCAGTTCAGCACTCTCCGCATTTTGACTGGGTCGTGGCTCACATCGGCTCCGCCTTCCCAGGTACTATCATCAGCCGAGTCTTGGCATGTGGACTCAAGGACTTTTGCTCTCATGGCGCTAAGGAACAAGGGCTAATGGTGATGGGAGTGGATAAAGGCAGCAGAGTGCCAAAGATTGGCTCAGTGGTGGGAATCCTTGGACACCTTGCAGTGCACCACTCGGACAGCATCAGGAAGGAGCTGCTCAGGATGTTTCAGGAAAGCCTGAGTCCGTCAAGCCCTCTATCTCCCACTTCATCCTCAACATCTTGGGAGAGTTCCCCTCAACTCCGTCGTGCTGCAGTTCCATTTCTGTTGCAGCTGGCTGCAATGTCCCCCAACCTCTTTGGTGCAGTGTCTGCAGAGCTGGTGGAGCTGCTGCGCCCTCCTGTCCTGCTCCAGCTGCAGGCCTTGCTGCAGGGCCTCCCCAGAGAGGAACTGGATAACATGCTGGGGCTGGCTGTCCACCTTATTAGCCAGAGCCCATCAGGAGGGTCCAGAGTCCTCCGTTTTCTGGCCGACACAGCGACCCCGGCCTCAGTCATCATCTCCGGCCCTACACCCTCCCCTCATGAAGGTGTCCGAGAAGGTTGCGATCGCCTCCTGCAGATGCTGCTTCTGCATCTCCACAAACTGGTCTTCAACCGCTCAGATGGAGCGGAAGTCAACCCTCATCACCCTGCTTCCTCTCAACCCAAGAGGGTCATCCCATTCTTGGAGGAGCTGCAGTCTCACGTAGGTGAGCTCTCTGCCGAGACACTGCGACTGGAAAGGAAGCGTCACCTCTGGCTCCATCAGCTGCTGTGTCTGCTGTCGGTGTATGGGGGTCCCAGCATTGCCACTGAGGCCCTCTGCCAGCTACTCACCCAGGCCCACAACCCAGAGGAGCTGGCTCTGGCCTGGCAGCTTCACACCACACTGTCCTCTTGCATGGTGGGACTCATTCATGCCGCTGTAGCTCGCTGTGTAGCCCAGATCCATGCACACACTCTGGGGCCCAAGCAGCTGAGGCAGCTGTTGCTTAACCTGGCCGCAGCCATCCAGAGTCAGGatgaggagaaaagaggagcaGTAGGGGTTCAGTCCTCCATGGCCATCCAGCTGGGGTCAGCGGTCTCAGGACACCTCCATGATTTTGGCCCGCTCCTTCTCCACGGTGACCCGGCTGTATCTCATGCTACAGTGCGCCTCCTGTCCTGTAGCCCACTCCCTCGCACCTCCTCTCCAGCACACCTGCTCCTGCTCTCTCGTGCTGCCGTCACTCATTTCTTTCTAGCGCTGCGGAGAAGAGGAGAAAGTGGGAAGGTGGGGAGAGATGGGGGACAGGCAGTCGAGGCGGTGAACTGTTCAGTCCTGCTCCTGTCTCGTTTCGCAGCGTATTCTACGCTCACTCTCAAAGCGGTACTTCAGCAGCTGGTTGAGGGAGCGCTACATAAAGGCAACGCTGGCCTGTTTGGAGGGCAGATCGCAGATATGTCTGGGGCCCCTTTGCCTTCCCCATCGGTGTCTCCTGACATCGGAGCATCGTTGCTGGATATCAACTGTCGGTTTGGTACCACCGTCAATTTTTCTGGCAGCGTGTGGTCTGTGTTTCATGCCGGGGTGATTGGAAAGGGGCTGAAAGTCCGCACTGACACACAGCTGACTGACCCATTGGGGGTCATGCAGaacgtcCAGACTCTGCTGGCTGTTGTAATCCAGTGTTGCAGCTCCTCTGGTCTTAACGGCTCCGTCACCGGCTCCCGGCCACCATCTGACCCAGACGAGCCGCTGCCCATCAACGCAGAGGCAGCCAAGGTTGTTGCAGTTACAATGGTGGAAAACGTCTGTCCAGATGTGGCCAATGGTGAGCTGTCCTGGCCCCCAGAAGAGCACGCCCGCACCACGGTGGAGCGAGACATTCACATTCGCCGTTGCTTTGAGGCCCACCCGGTGCTCTTCCCTCTGCTTCAGGTGGTGGCAGCTGGACGCCCGGCTCTCTGCTACTGCTCAGCTGTGCTCAGAGGCCTCCTGGCCACTCTGCTGGCCCACTGGGAGGCATCCCGCGAGGTGTTGTCCACAGACTCCCCGTGGCACCTCCAGGCCTCCTGCCTCCTGGTGTCCTGCATGGGAGAGGGCCAACTCCTGCCTCCTGTGCTGGCCAACGTCCATGAAGCTTTCCCCCACCTCACTCCCTTCGAGGTGAGGCTGCTGCTCCTAGCGGTGTGGGAGTATGTGCGAGGCAATGGGCCAATGCCCCAGAAGTTTGTCTTTAGCTCAGAGAAGGGGCTGTTCTGCAGGGATTTCTCACGGGACGGTGACGTGGCAAGATACGTAGCACCGATTCACAGCGTCCTGCATAAAAACATTGATAGATTGGGACATCTGTGCTGGCGGTTCCAGCTCTAAAGGGTAATGGGGAACAAACAGTATAGAGCAGGTGACAAGGAATAAATAGAGACTGTAAAATAGATGGAATACTGTGTTACATTACTCAGAGAGTGGACTGCAGATTTGCTTTTACTGTTCTTCAGTTTCATACAAGTTTAGTATAGTATATGTGTGTACCTTTTTGTACAATATTATTGTTTCTGTGACAAAGACAAGGGGACAAGAGAAATGGCACACATGTATATTATTTTAATACAGAATTTGctccacacaaaacacagccTTAATGTGTCATTTTTTGTTGGAAAACACAATTAAGCTCTGCTAAATAAtttataattgttttgtaacatTTTCAGATTGTTCATGTTCTAAAATTGTGGTTACAAACATGCTTTGCATCTCTTGTTATATGCCAAAAGCTGTTGTTTCAACCACattgcaaaataaataatttggtCCAA

Function

symbol description
ints5 Acts upstream of or within regulation of RNA splicing. Predicted to be part of integrator complex. Orthologous to human INTS5 (integrator complex subunit 5).

NR:

description
PREDICTED: integrator complex subunit 5

GO: NA

KEGG:

id description
K13142 INTS5; integrator complex subunit 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813611.1 True 3653 mRNA 0.55 4 22935020 22940305

Neighbor

gene id symbol gene type direction distance location
ganabb ganab coding downstream 456 22919844 ~ 22934564 (-)
si:ch211-114c17.1 LOC103374192,LOC100701998,LOC102296932 coding downstream 16238 22910157 ~ 22918782 (-)
ehd1a LOC104934092,LOC103356238,LOC105928696,LOC102204816,LOC101482200,LOC100701452,LOC104942686 coding downstream 35860 22884085 ~ 22899160 (-)
si:ch211-168f7.5 LOC103356264,LOC104942684 coding downstream 60238 22862148 ~ 22874782 (-)
dpf2l dpf2 coding downstream 94451 22830410 ~ 22840569 (-)
LOC120566540 NA coding upstream 1631 22941936 ~ 22945928 (-)
scyl1 scyl1 coding upstream 10239 22950544 ~ 22963954 (-)
macrod1 NA coding upstream 111112 23051417 ~ 23155345 (-)
trnaw-cca_10 NA coding upstream 220554 23160859 ~ 23160930 (-)
trnaw-cca_11 NA coding upstream 221083 23161388 ~ 23161459 (-)
G107215 NA non-coding downstream 58561 22875496 ~ 22876459 (-)
G107160 NA non-coding downstream 78674 22856125 ~ 22856346 (-)
G107102 NA non-coding downstream 216250 22713037 ~ 22718770 (-)
G107097 NA non-coding downstream 249562 22683733 ~ 22685458 (-)
G107072 mid2 non-coding downstream 329352 22601140 ~ 22605668 (-)
G107282 NA non-coding upstream 229843 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding upstream 239387 23179692 ~ 23181717 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding upstream 301732 23242037 ~ 23263899 (-)
G107610 NA non-coding upstream 851749 23792054 ~ 23792502 (-)
G107667 NA non-coding upstream 1259194 24199499 ~ 24259346 (-)
G107117 NA other downstream 242189 22691160 ~ 22692831 (-)
G107015 NA other downstream 814953 22119685 ~ 22120067 (-)
G106988 NA other downstream 1144295 21790253 ~ 21790725 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 1747367 21178852 ~ 21187653 (-)
G106728 mif other downstream 1804050 21127838 ~ 21130970 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 50682 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 152260 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other upstream 189404 23129709 ~ 23134785 (-)
rnaseh2c rnaseh2c other upstream 243887 23184192 ~ 23187058 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 944283 23884588 ~ 23988901 (-)

Expression


Co-expression Network