LOC120566913 (LOC107377419,LOC103374189,LOC100712009,LOC106536320)


Basic Information

Item Value
gene id LOC120566913
gene name LOC107377419,LOC103374189,LOC100712009,LOC106536320
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22942462 ~ 22949531 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813612.1
AGATAGTCTCAGTTTCGTTATTACAGCCTAAGGTCACGTGCTCCGGCTAAACAGAGCAACAATCAGCTGGTCGCTCACAGCTGAGTtttggtgtgtgtctctttggtGACGTCTCTGGTATGAAAGAGAGCTGTCGACATTATCTTTTGAAGGTGCTGAAAGTTACCTGGAAAGTCAAACCATACGAAACCAGACAAAAGAAACCCTGACATGGCCCCAACACTGTACGATGAGAAACCAGAGCTCGGGGACTTGATTGAGATCTTCCGGGGCTCCTATCAGCACTGGGCTGTGTATGTTGGCGATGGCTTCCTTGTTCACTTGGCACCACCCTCGGATGTCCCAGGTGCAGGCGCCAGCAGTATAATGTCTGTCATAACTGAGAAGGCCATTGTGAAGAAAGAGGAGCTGTGGGACGTGGTGGGAACCGACCAGTGGAAAATCAACAACAGCCTGGACAACGAGTACAAGCCACGCCCAGTTCACGTCATTGCGAGGGAGGCCTGTGCGAAGGTGGGCGATGAACTGCCGTACTGCGTCTTCAGGGGGAACTGTGAGCACTTTGCAAACGAGCTGCGCTATGGAAAAGCTGAGTCCCGGCAGGTGCGTAAGGCAGGAGAAACAGTCATGGTCGCAGGTGTGGCTACAGTGGTGGGTCTGGGGATCGTGGCTCTAGCAGGAGCTCTGTTTGGAGgtgggaaaaaagaaaacaagaacacacagtGAAGTACCAGGTCGCCTGTTCAGGGACTTGATGAACAGATCACGAACGTTTTCTGTGTGATATTAGTGTATAAGCTAGGCTTTAGCTCACAGAAAACGTTAATTTACATTTGTGATTTAGTCAGAAATTAGATTTCTACTCAACTTTACCATATGTCCCGCATGCCTTTGTGGGTTTGAATAACAATGCAAAGCTTTTAGGTTAGGGATCAAGATTctatttttctgactttttcaaATTTCTACAGACAGCACATACAAGCACAAGAAGCACTATTTCCACTAATGAAGCTGCCAAGATAaaatgtttcaatgttttaataTGAACTGAAGATTAAGCAgatatgttttgtattgtgaAGGATGATAAAAACAAAGCTGTGGTGGTAGTTGCTTATGAAGAAATATTAGCTACCAAAGTCGAGCCTTTAGACAAGAATATTTTACATAATCAAAATTAAGCTAATATAATGATATTGTGGTTACATCTCACAGAAAATGCCATGTAATGTCTGAAAGGAGTAAGGATGTGGACGGATCTAATTCAGCAGTTTTCTTATGACATGCTATCTCCTAATGAGTTCACAAGTTAACTAGAATTCATAATACAGTGTCTTCTCTTACATTTGTTTTGAATAAATAATTTATGTGATA

Function

NR:

description
PREDICTED: HRAS-like suppressor 3 isoform X2

GO: NA

KEGG:

id description
K23266 RARRES3; retinoic acid receptor responder protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813612.1 True 1377 mRNA 0.43 5 22942462 22949531

Neighbor

gene id symbol gene type direction distance location
map1lc3cl LOC103356239,LOC101159112,LOC100701181,LOC102781115,LOC101482496 coding upstream 62991 22877797 ~ 22879471 (+)
ttc9c ttc9c coding upstream 80383 22858625 ~ 22862079 (+)
LOC120566951 LOC102310073,LOC103356241,LOC104942682 coding upstream 86761 22847118 ~ 22855701 (+)
LOC120567435 NA coding upstream 119432 22815142 ~ 22823030 (+)
LOC120567165 LOC100699826,LOC104947027,LOC103356244 coding upstream 136639 22794685 ~ 22805823 (+)
LOC120566541 LOC102082053,LOC102202526,LOC101485142 coding downstream 29788 22979319 ~ 22987555 (+)
ccdc88b LOC103366585 coding downstream 48995 22998526 ~ 23039438 (+)
fermt3b fermt3 coding downstream 208838 23158369 ~ 23173854 (+)
zbtb3 LOC105026702 coding downstream 227307 23176838 ~ 23182934 (+)
LOC120566426 bscl2 coding downstream 238505 23188036 ~ 23193053 (+)
G107191 ganab non-coding upstream 10300 22929269 ~ 22932162 (+)
G107187 ganab non-coding upstream 15726 22925809 ~ 22926736 (+)
G107182 LOC102781801,LOC102213887,LOC101468765,LOC100701998,LOC103374192 non-coding upstream 26385 22915294 ~ 22916077 (+)
G107170 LOC103356238,LOC104934092,LOC105928696,LOC104942686,LOC106516021 non-coding upstream 54571 22884077 ~ 22887891 (+)
LOC120566955 NA non-coding upstream 67364 22867079 ~ 22875098 (+)
G107203 NA non-coding downstream 8627 22958158 ~ 22958580 (+)
G107276 NA non-coding downstream 287720 23237251 ~ 23237450 (+)
G107334 NA non-coding downstream 321268 23270799 ~ 23271221 (+)
G107341 NA non-coding downstream 333448 23282979 ~ 23285214 (+)
G107340 NA non-coding downstream 335832 23285363 ~ 23287678 (+)
ubxn1 ubxn1,LOC103374193 other upstream 32900 22903755 ~ 22909562 (+)
G107163 LOC103356264 other upstream 76786 22862190 ~ 22865676 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other upstream 1473635 21448800 ~ 21468827 (+)
zdhhc5b zdhhc5 other upstream 1591484 21289531 ~ 21350978 (+)
selenoh selenoh other upstream 1659233 21279687 ~ 21283229 (+)
rom1b rom1,LOC102779683 other downstream 1064 22950595 ~ 22997038 (+)
G107168 NA other downstream 5441 22954972 ~ 22973761 (+)
flrt1b LOC103374305,LOC102200053 other downstream 150494 23100025 ~ 23132685 (+)
tgfb5 LOC104925539,LOC103374198,LOC102800105,LOC105920438,LOC102314494,LOC101466107,LOC100690458 other downstream 303224 23252755 ~ 23262261 (+)
G107333 NA other downstream 319260 23268791 ~ 23270216 (+)

Expression


Co-expression Network