ppid (ppid)


Basic Information

Item Value
gene id ppid
gene name ppid
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 30537827 ~ 30548407 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813632.1
ATTCTTCTTCGTTTAACCCTATGGTTTAACCTGCTCCAGTAACGTTACACCAGCCGGTCGGgtttagctagctaagttagccGAAACAAGTGTCTGAAACCGCCCTgtccttaaaatgtctcactcAATACCGTCTGACAAGCCTTCAAACCCCGAAAACCCTCGCGTCTTCCTCGATGTAGTCGTTGGAGGAGAAAGAGCTGGCCGGATAGTTCTAGAGCTGTTTGCTGATATCACCCCCAAAACTGCAGAAAACTTTCGGGCGCTCTGCACTGGAGAGAAAGGCACTGGGAAATCAACTGGGAAACCGCTGCACTTCAAAGGATGCCCTTTCCACAGAATCATCAAGAAATTCATGATCCAAGGAGGTGACTTCTCCAACCATAATGGCACCGGGGGAGAGAGCATCTACGGGGAGAAGTTTGAGGATGAAAACTTCCACTACAAGCATGACAAAGTGGGTCTGCTAAGCATGGCGAATGCCGGGCCAAACACCAACGGCTCACAGTTCTTCATAACTACTGTGCCCACTCCACACTTAGACGGCAAGCATGTAGTCTTCGGACAAGTGTTAAAAGGAATGGGAATCGTAAAAATGCTGGAGTCTATTGAGACTAACGAGGACGTTCCTGTTAAGCCATGTGCCATAGCAGACTGTGGTGAGCATAAGGATGGGGACAGCTGGGGCACTGGACCAAGCGATGGATCAGGGGACACGCACCCAGACTTCCCCGAGGACTCCGACGTCGACTTTAAAGATGTTGACAAAGTTCTGTCTGTTGCTGAGGATGTGAAGAACATTGGAAACAGTCTTTTTAAGAATCAAGACTGGAAAGCTGCTGTCAACAAATATAGCAAAGCCCTCAGGTACTTGGAGGTGAGTGGAGAGCTGCTGGAGGAGGCGGCGCAGCAGAAGCTGGAGCCCACCGCCCTCAGCTGCTTCCTCAACACAGCTGCTTGTAATCTGAAAATGCAGCTGTGGCAGGATGCTCTGGACAGCTGCAATGAGGCTCTGGAGCTGGACCAAGCCAATACTAAGGCACTTTTCCGGAGGGCCCAGGCCTGGCAGGGGTTAAAGGAAAACAGCAAAGCCATGATTGATCTGAAGAAAGCTCAGGGAATAGCTCCAGAAGACAAAGCTATCAGCAATGAGATGAAGAGGGTTCATCTCAAAAtccaggaggagaaagagaaagaaaagaaaatctatgCCAAAATGTTTGCGTGAACATTTCACCTAATGATGCAATGAGTTTGTTAGTAACGTTTGTCAATATTTGAAGTCATCTCTACGTGGGAAGCTGCACTCCGATAAGGAGTCTGTAACCAGgtgaaaatatacagtatgattTGATGTTTTCAAGCGGCACATTTCTCACTGTCAGTGTTTTAAGGGAATAACTGTTGTAAGCTTTGGCCTGTCTTAATTCTGACAAGTGTCTTCACTGTAATGAATAGTTTGAGTGTTAGTGTGACGCACGGCTGACTCCACTGCTCTGAAAAAACTGGGTTAACACTGGCCCTTGTTCTAGGGGTTTGAAGTAGTTCAGCAAAGCAAAGTTGTGTATGTTTATATCGTTTCATGGTAGGGATTTTGATACCGTGCTCCTGGCCACATACATccatctattttttattttgttttttttacagaggttaaaaaaaaacaaaagggatAACAGTCAAGAGTTCTTTATTCATTACTGTGATATCATCTAATGATTTTATGTACAATACGGATTAAATGCTGTCCCAATATACCTGGaagaaatgcaaaaataaaCCTTAATTTGAGAACA

Function

symbol description
ppid Predicted to enable cyclosporin A binding activity and peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Orthologous to human PPID (peptidylprolyl isomerase D).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase D

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K05864 PPID, CYPD; peptidyl-prolyl isomerase D

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813632.1 True 1799 mRNA 0.45 10 30537827 30548407

Neighbor

gene id symbol gene type direction distance location
pdgfc pdgfc coding downstream 353135 30139809 ~ 30184692 (-)
neil3 neil3 coding downstream 434908 30090948 ~ 30102919 (-)
si:dkey-237h12.3 tenm3 coding downstream 509689 29881190 ~ 30028138 (-)
tdo2a tdo2 coding downstream 663179 29867532 ~ 29874648 (-)
asb5a asb5,LOC103355623,LOC101464329,LOC100697054,LOC107095814 coding downstream 678715 29852829 ~ 29859112 (-)
LOC120566929 clg2h4orf45,LOC104948239,LOC102200624,LOC101472142 coding upstream 4769 30553176 ~ 30555189 (-)
fstl5 NA coding upstream 250830 30799237 ~ 30974285 (-)
anxa5a anxa5 coding upstream 722819 31271226 ~ 31300495 (-)
ccna2 ccna2,LOC101477005 coding upstream 761138 31309545 ~ 31313167 (-)
bbs7 bbs7,LOC102788539 coding upstream 766715 31315122 ~ 31321212 (-)
G108722 NA non-coding downstream 134791 30402660 ~ 30403036 (-)
G108718 NA non-coding downstream 149973 30387521 ~ 30387854 (-)
G108702 NA non-coding downstream 255200 30275864 ~ 30282627 (-)
G108600 NA non-coding downstream 761406 29723824 ~ 29776421 (-)
LOC120567321 NA non-coding downstream 787291 29553435 ~ 29750536 (-)
G108772 rapgef2 non-coding upstream 104463 30652870 ~ 30654526 (-)
G108785 NA non-coding upstream 185152 30733559 ~ 30733770 (-)
G108810 qdpr non-coding upstream 454241 31002648 ~ 31004486 (-)
G108828 NA non-coding upstream 581856 31130263 ~ 31131659 (-)
G108840 NA non-coding upstream 626456 31174863 ~ 31175459 (-)
gask1b fam198b,LOC102776406 other downstream 180971 30346978 ~ 30356856 (-)
cxcl14 cxcl14 other downstream 1729833 28797298 ~ 28807994 (-)
fam13b fam13b,LOC102777128 other downstream 1742319 28714863 ~ 28795508 (-)
LOC120566547 NA other downstream 2499127 28024570 ~ 28038700 (-)
G108433 neto1,LOC101071133 other downstream 2514598 28021737 ~ 28023229 (-)
G108777 rapgef2 other upstream 112505 30660912 ~ 30661623 (-)
G108781 rapgef2 other upstream 121124 30669531 ~ 30670849 (-)
LOC120566409 limch1 other upstream 836683 31385090 ~ 31423481 (-)
LOC120566557 limch1 other upstream 871472 31419879 ~ 31485976 (-)
tlx2 tlx2,LOC107396138 other upstream 1291135 31839542 ~ 31851757 (-)

Expression


Co-expression Network