si:ch211-168f7.5 (LOC103356264,LOC104942684)


Basic Information

Item Value
gene id si:ch211-168f7.5
gene name LOC103356264,LOC104942684
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22862148 ~ 22874782 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813682.1
TCATAGGGGACACAGCGTACAGGAGCGCAGCACCATGGTAACTCCACTGGACCGAGAAGCTTATaagtgaaatttaaaaaaaagagaggattgTGTCAACAGGAAATGAAGACATGGCTCGTTGATGTTCCCTCATACCGGTGGATTCATTAATTCTAGTCTTGTGCCAGTCAGCAGGGCTGTCCTGAAGCTGTAGGCTGTAGCTGCATGGCACGTTAGAGATGGTGATTATATTTCCCTTATCGCATTGATCCAAGCGACTAAGTAGGCTACTATGTTGCTATCGCTCGTCCGGACCTGTGTTGCTCTACCTGGAGCTGCACCGTAGCCAACTCGTTCGTCTCATCCATTGCACGGCAACTGAGCGGTGGTCGGCGGTGCGCCTTGGTTCCGCCTGCCGGGAACCCCGACGAGGATGGCCGGCCGCCGCGGCTGCGTGAACTCGCTCTGGTCGGGCACTGAGCGTGTCCGCATCGGAGAACGCCTCAACGCGACGCTGGCCGGCGTGCTGGAGCTGGAGCTGCTCAGGTGCAAACACCTGGAGATGGTGGACACCGCTCTGGAGCACCGAGCCTCCACTACCGCCAACGCCGAAGAACCACGGGCGGAGGAGGGGAGCGCAACCCCGGAGAGCGCCGCCTCGGAAGCCAAGCATGGCTCTGCGACATCCCGCAGGCAACAGGTGCCGTCTCTCTCAGATATAGTGGTATTGCCCTGTCAGAGCAGCTCAGAGGATTGTGGCAGTAATTCAGGGGATGGGACAGTCCACTTCTCATCTGGCAGGGGGAGTAACTCACGCTGGTCTACTCTGTCCTGGGACGCCccctctgacctgctctctCCACCAACACCAGACCCCAGTGGAACGGTCCATCTGGACTGTGACTCCAGACCTAGttcagGTTTCTATTCAGTAAGCGGGAGCTCGCTCTCAGACTCTTGCTACTCTGTGTCCAGTGACGCTGCTCAGGGGGTATCGGTGCCACCGGCCAGACCCCTGAAGCTGTGGGAGCAGGTCCCTCTGTCCTCTGACAACACTGACATCCTGTGGTCAGAAGGTGCAGTGGAGCAACAGCAGCCTGCACTGCAGAGCAGCCAGGAAGATGCTGAACCAACAGAAGGGACACCAGCTTCAGTCCAAAGTGACATTGAAGCAGCCAGTCTGAGCTTTCTGTCTGACCTCTGCTCAGGACTCAGTGACTCCCTGATTTCTTCCCTCATCCCGCTTTTCGaccccacctcctccctccatccaaACCCCCAGCTGGACCCTCGCTACTGCACCGACCTGGTGTCCCGTCGGACCAAAGAGGTGTACCCCTACCCAAGCCCGCTGCATGCCGTCGCCCTCCAGAGCCCCCTCTTCACCTCCCAGAGCCAAGAGAAATCGGCCTCTCCAAGCCCTGAAGGACCCCAACTAGATGAACCACAAGAGTCCAACGCTGATCCAACTCTGCCTCACCAGCCCCAGCAGCCCCCTGGCCAAGCTTCTTTCACCCAGCTGGAGCAATACATCTCTCGACTGGCTCGCCAGTACTACAGCCGGGTAACCTCCTCCACTTCCGATTTCACTTCAGCTGCCACCCCTGGTCAAGTCAGGCACAGAGGCCTTGGTACCCCTGGCAAAAGTCACGGTTCGACCCAGTCCCTTTCTGCCTTTGAGAGCCGCAGTACACCCTCCACCCTGCCAGGGGGCAGCATCACTCCCTGTAAGTCACTGCTGGGAAACTCTGCCAGAATCAGCCTCAGCACCAGTGGAAAAAAAGCTACTAGAAATTCAATCAACCTGGGTAACCTTCCTTCAGCAACCGGAGAGGACTTGAACATAAATCTGCATCTCAACCTCAACTTGAACCTGACTCCTGGTTTAAATTCTAGCCGGGGACTGGTGGACAATCCCAAAAATGGCAGCTGTGGAGCTTTGAGGAGCGATATTTCTTCAACTTCCACGGCCTCTGCTACATCACTCTCCTCCACTACACCCACCCCAGCAGTTAGGGCTCGCCCTCGCATTTCAACATGTCCAAGCAGCCTGAGCCACCGCAGTTCCCTGGAGGTCACTTCAGGGTCTGGACCCACTTCTGGATTTGGGTCATCTGTATTCTGTCGCTCAGTAGACTGGAGCAGCGGTGCTCCACCTGAGACTGGGCCATCAGTGTTTGGTTCAAACTCTGGATCAGCTCCAGGGTCTCAGCGCAGTAGTTTGATCCAAGAGTCCAGCTCCAGTCCCAAGCTGAGTGAAGACTCCCCCATGGTGGGGGAGATCTCACGCCTCTCTGGCCTCTCTAGGGCTGTTGTGGTGGGATTGATGGAACAAGGTGTGGAGCTGGATATTGACTGCTTCCAAACGGATCCGGCAGGTGAGGTGAGGGGTCACAGTAAAACCCACCTGAAAGCCCAGACAGATCATTTACATGATTATACTAGACTAACCGACCTTAATCCCCAGAGACCCATACAGCTGTCTCTCAGTGTCACCCATTCTCCACAGTCTCAGTCTAGCCTCACCCCTCCTCTCTCACACTCCAGCAGCCCCATACACCCCTATCAGTCCATCCATATTCCCTCTTCCCACTATTCCTCACAATGCCACTACCAGCAGATCCCTTCGCCGTCTGACCTTCCCTCTTCCACTgcctcctcccctgcctcccACCCCACCACCAGGGGCCGTTCCCCTCCCCGGCCTCTCCAGCCATCCCCTCTGGGTGCCACCCCGCTCTCTGTTTTCCGACGGGATGCACCCTTCCAGTGCTCCCTGCCTCGCACCAATACAAGGAGCTCTCCTTTGGAGCATGGCGGTATCCAACCAAGGGGTGGCTCACTTCGGCAGAGTGGGGGTAGTGGTGGGTGTAAGAGGGTAGAAGGAGAGGGGCTTTATAGAGGAAAGCATGCCTCCCACAAGCTGATCCGGGCAGCCACAGTAAGCAGCTATGCTAAGAGAGAGGACCATAGCTCTGCTTGGGCTGGGGAGCAGGAGAGGGAGCGATCATCAGCCCAGACGCCCAGGAGGACCTCCAAAAAACTCTGGAGGGGCTTTGAGGGACGCATCTGGAGCAAAGAGTCCGAAAGCGAAAGAGAGGAGATGGACAGAGCTGAGTACGGCTATGGATGGAGGAGGAACAGCATTGGAAGCTGGAGGAGGGAGCATCGAAAGATGAAGGCTTCATCTAGCAATAATGACAGAAGGCCAAAAGTAGAGAACTCCCCCATCTTCTCAAAGAAAAGAGGGAAGGAAGATGGGGAAAGACGCAGCACCAGCCTCAGGCTTTCCAGGAGGGCTTTGTTCAGGAGTGAGTCCCAAGGCTTGCTGGTGTCTCGTAACATCGGCGAGGAGCCCACAGAGCGGGCACACTGGGTCTCCTCATTAGATGTGGGGCAAAGTAGCATGGGCCACAGCAAAGACGAGGGCATCAGACTGCTGAGAGCAAAGGAGGAAGACAAACGCCTGTCCTCCACCGCCAGCCTCTTTAACCTCTCTCGCTCTCAGAGCCTGGAAGGCAGCTGCcattccctctcccctctctcctccccttcctTCTCTCCATCCCCTCCTTCACGGATGTCCCTACAGCGCTCTCGATCACTGAGGGACTTGGGGAGGAGAGTGTTTGGCTCCATGAGGTCCCTGAGTCTCAAACGGAAGCCATCCAAGAAGTGAcacatgtacaataaataaCCATCACAGTATATGCATTTTCCACGTTAAGTTCAAAACACCAGTGATTGATGATTGGTTGGTATTATATTTCATGTAAAAGGAAGTGCCATCATTTTAAACTTTCAAAGACGTAATGATTGATTAGACAGATACACTGGTTTTATAATACTGGCCATAAGATATCTTCCAGTCCTTTTAATCCACTACCAATATGATGGAAGTTCCTCTCAGGCACATAGTCTGTAAAAAGCTATTCATTTTGCTCTTGGCTCACATCATTCATCTTAGTaatgtttttgtacatttttaaagACACTCTTTTTATAGCCTCACAAAAAAACTACATAACGTCTGTCGAATTTCTTCAAATAGGTTCTGCAGCATACAGTGCATTGCAGCCAATCAATTTCGCTGCCTCCCAAATTCTTTCCTCTTTGACAATGCATTAATTGTGCACCCTACAGTAGCAAGCAAGAGTGCTGTAGGGTGCAGCATGACCCACAGCGAAATGTCAGTGAAGAAAACTTATGTGACAACTTCATATAAGGGTGAATAATTCCTTTTAGGAGCTGGAAAGAACtacaaaccttttaaacattttattagtGTGGGTTTCAAGGGAATTTTTCAGTGTGCTGTTTCAAAGGATTTAACATCTCAACAGAACTTTATTCTGGGCTAAAAGTagcccaatttaaagatattgaATATGAACTCCTATTGGCTATAAGTAGAATAATCCTGTAACCATGTATGAATGTGTATAATGTACACTCCCCTTCTGCATGCTGCTCTGTGACTTGTTCAGTGATTATAGCTATTGTGAGAATGTGATAATCTGTTTATGGGCAACACTGCCTCTGAAGTACAATCATATTGGCCAGATAATGACCAAAACCAAGCAAATACTCTTTAACTTGATATTGTGCTCAggattttcaaatattgaatGATTAAAATATTGAAGTTATTGGAGACAAAATGTGGCTTATCATGGCTTacaattaataaaagaaatatgtaTAACTAAA

Function

NR:

description
uncharacterized protein LOC110489066

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813682.1 True 4692 mRNA 0.52 4 22862148 22874782

Neighbor

gene id symbol gene type direction distance location
dpf2l dpf2 coding downstream 21579 22830410 ~ 22840569 (-)
LOC120567161 NA coding downstream 78931 22778405 ~ 22783217 (-)
slc16a2 slc16a2 coding downstream 119077 22718894 ~ 22743071 (-)
tsc22d3 LOC103390732,LOC104954424,LOC101161414,LOC103356417,LOC102306956,LOC102786303 coding downstream 453937 22375266 ~ 22408211 (-)
pcdh11 LOC104946172,LOC103356418,LOC101473199 coding downstream 846395 21884772 ~ 22015753 (-)
ehd1a LOC104934092,LOC103356238,LOC105928696,LOC102204816,LOC101482200,LOC100701452,LOC104942686 coding upstream 9303 22884085 ~ 22899160 (-)
si:ch211-114c17.1 LOC103374192,LOC100701998,LOC102296932 coding upstream 35375 22910157 ~ 22918782 (-)
ganabb ganab coding upstream 45062 22919844 ~ 22934564 (-)
ints5 ints5 coding upstream 60238 22935020 ~ 22940305 (-)
LOC120566540 NA coding upstream 67154 22941936 ~ 22945928 (-)
G107160 NA non-coding downstream 5802 22856125 ~ 22856346 (-)
G107102 NA non-coding downstream 143378 22713037 ~ 22718770 (-)
G107097 NA non-coding downstream 176690 22683733 ~ 22685458 (-)
G107072 mid2 non-coding downstream 256480 22601140 ~ 22605668 (-)
G107070 NA non-coding downstream 267267 22592660 ~ 22594881 (-)
G107215 NA non-coding upstream 714 22875496 ~ 22876459 (-)
G107220 NA non-coding upstream 54072 22928854 ~ 22973760 (-)
G107282 NA non-coding upstream 295366 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding upstream 304910 23179692 ~ 23181717 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding upstream 367255 23242037 ~ 23263899 (-)
G107117 NA other downstream 169317 22691160 ~ 22692831 (-)
G107015 NA other downstream 742081 22119685 ~ 22120067 (-)
G106988 NA other downstream 1071423 21790253 ~ 21790725 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 1674495 21178852 ~ 21187653 (-)
G106728 mif other downstream 1731178 21127838 ~ 21130970 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 116205 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 217783 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other upstream 254927 23129709 ~ 23134785 (-)
rnaseh2c rnaseh2c other upstream 309410 23184192 ~ 23187058 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 1009806 23884588 ~ 23988901 (-)

Expression


Co-expression Network