dctn4 (dctn4)


Basic Information

Item Value
gene id dctn4
gene name dctn4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 15671635 ~ 15688818 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813787.1
TAGCGGTGACATCAATACTAGCAGTGCAGACAGTGAGCCCACGGACTCGGTTGTGCTGCTCAGAGATGGCGTCCCTTCTGCAGCCAGATAGAGTTGTCTATCTGGTTCGTGGAGAGAAAAGGATTAGAGCCCCATTATCTCAACTTTATTTCTGTCGCTACTGTAGTGAGCTACGGTCTCTGGAATGTGTGTCTCACGAGGTGGACTCCCACTATTGTCCAAGCTGTCTGGAGAACATGCCATCTGCAGAGGCTAAGCTTAAAAAGAACAGGTGTGCAAATTGTTTCGACTGCCCGAGTTGCATGCACACACTGTCTACGCGAGCCACAAACATCCCAGCTCCTCTGCCTGATGATCCTACCAAGACGGCCATGAAAAAGGCCTACTACCTGGCCTGCGGCTTCTGCCGCTGGACCTCCAGGGACGTGGGAATGGCTGACAAATCAGTTGCCAGCGGTGGATGGCAGGAGCCAGAGAACCCTCATACTCAGCGGATCAACAAGCTGATCGAGTATTACCAGCAGCTGGCCCACAGAGAGAAGCAGGAGAGAGATAGGAAGAAGCTGGCCAGGAGACGACAGTGCATGCCTCTGGCGTTCTCGCAACACACTATTCATGTGGTGGAAAAATATGGCCTTGGAACCAGACTGCAGAGGCAGAGGCCTGGAGCTCCCATATCAAGCCTGTCGGGCCTTTCCCTTAAAGAGGGTGAGGACCAGAAGGAGATCACCATCGAACCTGCCCAGGCCCTTGATGAAGTGGAACCCCTGCCTGAAGACTGTTATACCAGGCCCATCAGCTTACCGGAGGTGACCACGCTGCGCCAGCGGCTTCTGCAGCCAGACTTCCAGCCTGCAGTGGCGTCTCAGCTCCACCCCAGACACAAACACCTTCTGATGAAGCGCTCACTGCGCTGCAGGAAATGTGAGCACAACTTGAGCAAGCCAGAGTTTAATCCTACTTCAATCAAGTTTAAAATCCAGCTGGTGGCTGTGAGTTACATCCCTGAAGTGAGAATTATGTCCATTCCAAATCTCCGGAACCTGAAGGAGAGCCAAGTGCTGCTGACCCTGACCAACCCGGTGGAGAACATCACCCACGTCACGTTGGCTGCCTGTGAGGACGACGATCCTGATGATGTCAATAGCACTGCGAAGGTTATGGTACCCAGCAAAGAACTGGTCTTGGCAGGAAAGGATGCTGCTGCTGAGTACGATGAACTGGCTGAACCTCAGGACTTCCAGGATGACCCTGATGTTGTTGCCTTCAGGAAATCCAACAAGATTGGTTTCTTCATCAAAGTGATCCCTCAGAAAGAAGAGGATGCGGACGTCACCGTTTCATTTAAGATCCGACACGACTTCCGCAACCTCGCGGCTCCCGTCAGGCCGAGCGAGGAGGGAGCCGAAACCACCGCCGAGGCCGTTTGGCTCACGCACCACGTAGAGCTGAGGCTGGGACCACTCGCTCCCTGAACATGAATACTTGGTTTACTATCAAACAGTCCTACTGTTGAGTTCTTTTAACTAATTTCTGTAAACCTGTGGGAtgaatttaatttacaaaaatgaTTTCCGATTCTGCTCATTGATCTGTAAGAACTATTTATGATCTGCCTGACATACGGTTGTTTCAGAGTTGTAGCTCAAGCTGCGTCACCAGATGTACATTGTAGAACATACAGTGATTGCATGATAGCCCAGTTTATGAAACTACAGGAAACCATGACTGACTGCAGACTGATAAGTGCATCACGTTTAACTTGACtaactgatttattttttttgttagccAAAAACATGGCGATATATAGTGTTTCACATCATCATTCTCCTCAGCTTAAACACTATAGCATCTATCGGTAAAAAGCACTTTTAGTGCGAGGTTACCTACAGGAAACGgaaccatatatatatacaatgaCTTAAAACATGTTAGGCTTTGTTTAGAAATTCCACTGATGTGCTTACTTTGCTTGTTGtgctacatacagtattttcttAAATGGCAAAGCAACTACAAAGTTTGTCTTTTTCAAAGTATTAGCGGTGGATTTTTGGAGTGAAATATTAGTCTTTATAGTTTGTAGAAAATAGCAGTTTATGTTCAAAGATGAGAGGTTATACGTTAATATAACGGCATCGAGATGTGGTAGAGAATGAATGAGCAGAATCAGAAACCACAGTTGAGAACAATCCAAATAATCCCGGACCGTGCAGCACACACTGCGATTTCAGCTTATGTATCCTCGTCAACATTCTTTTCTGCAGACAGTAATATCGTATTAAGTCGCATGCTTCAACTATAGTAAATATCGCACACGTTAGACAAGTCATCACAGTTACTGATCCTGAACAGAAAGGTAGGTTCTCTGGTTGAAGGTGAGACCTGcccatacttttacttttgtctgAAGTCTAACAGTAACCATCACTAGCACTATGGAGAGGACGTATACGAAGCTCTGTAAAGTACATGAAATACAAAGTGttcattatttaaatgtattgagacactatcatttttttttttttatgattttaaaaatgtatcctcCTGGTTTGTAGAACTCACTGACCTCTGTGGCAGTGTATATCGTAAGCTGCTGTTATTTTTGGTCTCGAGTGTGTTAGTAAAGCATAGCCTCAAAACACTGTTAATCTTAATTCTGTACCGGCTAATAAAATAATGTGATACTGTAACCGA
>XM_039813788.1
TAGCGGTGACATCAATACTAGCAGTGCAGACAGTGAGCCCACGGACTCGGTTGTGCTGCTCAGAGATGGCGTCCCTTCTGCAGCCAGATAGAGTTGTCTATCTGGTTCGTGGAGAGAAAAGGATTAGAGCCCCATTATCTCAACTTTATTTCTGTCGCTACTGTAGTGAGCTACGGTCTCTGGAATGTGTGTCTCACGAGGTGGACTCCCACTATTGTCCAAGCTGTCTGGAGAACATGCCATCTGCAGAGGCTAAGCTTAAAAAGAACAGGTGTGCAAATTGTTTCGACTGCCCGAGTTGCATGCACACACTGTCTACGCGAGCCACAAACATCCCAGCTCCTCTGCCTGATGATCCTACCAAGACGGCCATGAAAAAGGCCTACTACCTGGCCTGCGGCTTCTGCCGCTGGACCTCCAGGGACGTGGGAATGGCTGACAAATCAGTTGCCAGCGGTGGATGGCAGGAGCCAGAGAACCCTCATACTCAGCGGATCAACAAGCTGATCGAGTATTACCAGCAGCTGGCCCACAGAGAGAAGCAGGAGAGAGATAGGAAGAAGCTGGCCAGGAGACGACAGTGCATGCCTCTGGCGTTCTCGGAAAAATATGGCCTTGGAACCAGACTGCAGAGGCAGAGGCCTGGAGCTCCCATATCAAGCCTGTCGGGCCTTTCCCTTAAAGAGGGTGAGGACCAGAAGGAGATCACCATCGAACCTGCCCAGGCCCTTGATGAAGTGGAACCCCTGCCTGAAGACTGTTATACCAGGCCCATCAGCTTACCGGAGGTGACCACGCTGCGCCAGCGGCTTCTGCAGCCAGACTTCCAGCCTGCAGTGGCGTCTCAGCTCCACCCCAGACACAAACACCTTCTGATGAAGCGCTCACTGCGCTGCAGGAAATGTGAGCACAACTTGAGCAAGCCAGAGTTTAATCCTACTTCAATCAAGTTTAAAATCCAGCTGGTGGCTGTGAGTTACATCCCTGAAGTGAGAATTATGTCCATTCCAAATCTCCGGAACCTGAAGGAGAGCCAAGTGCTGCTGACCCTGACCAACCCGGTGGAGAACATCACCCACGTCACGTTGGCTGCCTGTGAGGACGACGATCCTGATGATGTCAATAGCACTGCGAAGGTTATGGTACCCAGCAAAGAACTGGTCTTGGCAGGAAAGGATGCTGCTGCTGAGTACGATGAACTGGCTGAACCTCAGGACTTCCAGGATGACCCTGATGTTGTTGCCTTCAGGAAATCCAACAAGATTGGTTTCTTCATCAAAGTGATCCCTCAGAAAGAAGAGGATGCGGACGTCACCGTTTCATTTAAGATCCGACACGACTTCCGCAACCTCGCGGCTCCCGTCAGGCCGAGCGAGGAGGGAGCCGAAACCACCGCCGAGGCCGTTTGGCTCACGCACCACGTAGAGCTGAGGCTGGGACCACTCGCTCCCTGAACATGAATACTTGGTTTACTATCAAACAGTCCTACTGTTGAGTTCTTTTAACTAATTTCTGTAAACCTGTGGGAtgaatttaatttacaaaaatgaTTTCCGATTCTGCTCATTGATCTGTAAGAACTATTTATGATCTGCCTGACATACGGTTGTTTCAGAGTTGTAGCTCAAGCTGCGTCACCAGATGTACATTGTAGAACATACAGTGATTGCATGATAGCCCAGTTTATGAAACTACAGGAAACCATGACTGACTGCAGACTGATAAGTGCATCACGTTTAACTTGACtaactgatttattttttttgttagccAAAAACATGGCGATATATAGTGTTTCACATCATCATTCTCCTCAGCTTAAACACTATAGCATCTATCGGTAAAAAGCACTTTTAGTGCGAGGTTACCTACAGGAAACGgaaccatatatatatacaatgaCTTAAAACATGTTAGGCTTTGTTTAGAAATTCCACTGATGTGCTTACTTTGCTTGTTGtgctacatacagtattttcttAAATGGCAAAGCAACTACAAAGTTTGTCTTTTTCAAAGTATTAGCGGTGGATTTTTGGAGTGAAATATTAGTCTTTATAGTTTGTAGAAAATAGCAGTTTATGTTCAAAGATGAGAGGTTATACGTTAATATAACGGCATCGAGATGTGGTAGAGAATGAATGAGCAGAATCAGAAACCACAGTTGAGAACAATCCAAATAATCCCGGACCGTGCAGCACACACTGCGATTTCAGCTTATGTATCCTCGTCAACATTCTTTTCTGCAGACAGTAATATCGTATTAAGTCGCATGCTTCAACTATAGTAAATATCGCACACGTTAGACAAGTCATCACAGTTACTGATCCTGAACAGAAAGGTAGGTTCTCTGGTTGAAGGTGAGACCTGcccatacttttacttttgtctgAAGTCTAACAGTAACCATCACTAGCACTATGGAGAGGACGTATACGAAGCTCTGTAAAGTACATGAAATACAAAGTGttcattatttaaatgtattgagacactatcatttttttttttttatgattttaaaaatgtatcctcCTGGTTTGTAGAACTCACTGACCTCTGTGGCAGTGTATATCGTAAGCTGCTGTTATTTTTGGTCTCGAGTGTGTTAGTAAAGCATAGCCTCAAAACACTGTTAATCTTAATTCTGTACCGGCTAATAAAATAATGTGATACTGTAACCGA

Function

symbol description
dctn4 Predicted to be part of dynactin complex. Orthologous to human DCTN4 (dynactin subunit 4).

NR:

description
PREDICTED: dynactin subunit 4 isoform X1

GO: NA

KEGG:

id description
K10426 DCTN4; dynactin 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813787.1 True 2706 mRNA 0.46 14 15671635 15688818
XM_039813788.1 False 2685 mRNA 0.46 13 15671635 15688818

Neighbor

gene id symbol gene type direction distance location
LOC120566876 LOC104959829 coding downstream 33275 15621014 ~ 15638360 (-)
ctnna1 ctnna1 coding downstream 154875 15441419 ~ 15516760 (-)
sncb sncb coding downstream 521706 15135126 ~ 15149929 (-)
LOC120567479 NA coding downstream 539481 15127898 ~ 15132154 (-)
nek12 NA coding downstream 618385 15050136 ~ 15053250 (-)
tnip1 tnip1,LOC103376067 coding upstream 9519 15698337 ~ 15715960 (-)
anxa6 anxa6,LOC102795126 coding upstream 28423 15717241 ~ 15729319 (-)
rmnd5b rmnd5b,LOC103391242 coding upstream 94984 15783802 ~ 15791552 (-)
hbegfa LOC104968122 coding upstream 161676 15850494 ~ 15854036 (-)
cltb cltb,LOC103471122 coding upstream 226062 15914880 ~ 15919202 (-)
G105149 NA non-coding downstream 101555 15569818 ~ 15570080 (-)
G105147 NA non-coding downstream 142376 15527066 ~ 15529259 (-)
G105113 NA non-coding downstream 307694 15363636 ~ 15363941 (-)
G105110 NA non-coding downstream 340496 15330925 ~ 15331139 (-)
G105096 NA non-coding downstream 396712 15274555 ~ 15274923 (-)
G105217 LOC103376071,LOC104959352 non-coding upstream 62636 15751454 ~ 15755017 (-)
G105230 NA non-coding upstream 139473 15828291 ~ 15828491 (-)
G105241 NA non-coding upstream 191545 15880363 ~ 15889068 (-)
G105243 LOC103365697,LOC106906325 non-coding upstream 201339 15890157 ~ 15892250 (-)
G105247 NA non-coding upstream 207439 15896257 ~ 15896732 (-)
tspan17 tspan17,LOC103361971 other downstream 52527 15598343 ~ 15619108 (-)
G105086 NA other downstream 536899 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 563037 15089404 ~ 15108598 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other downstream 932142 14735192 ~ 14739493 (-)
uvssa uvssa,LOC104961899,LOC106533076 other downstream 1098142 14537100 ~ 14573493 (-)
hnrnph1 hnrnph1,LOC102791917 other upstream 177242 15866060 ~ 15871949 (-)
unc5a unc5a,LOC102788949 other upstream 271379 15960197 ~ 16103794 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 835538 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 1268825 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 1453264 17142082 ~ 17151616 (-)

Expression


Co-expression Network