LOC120567040 (LOC104949792,LOC104935341,LOC107391212,LOC106530877,LOC103151698,LOC105918375)


Basic Information

Item Value
gene id LOC120567040
gene name LOC104949792,LOC104935341,LOC107391212,LOC106530877,LOC103151698,LOC105918375
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 5920351 ~ 5946550 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813829.1
GGGGCGGAGCGGTTCTCCCTACCGGGCGGTGTCAGCTGGAGAAAACGGGAcggaggagcagtgagaggccGACACAGGAGGGACTCATTTCCCCGGCTGATTGTTCTCACTGCACCAGCGGACTCCAGGTGTCAGCATGTCGACAAACATAAGCGCCGAGGAGATGGCGGAGATGAGGGAGGCTTTCCAGAAAGTGGATTCGGACGGCAATGGGTACATCGTCTCCTCTGAACTCGGCGATCTCTTCCGCGAGGCGGGCTGTCCTTTGCCCGGATACCAGATCAGAGAACTGCTTCAGAAGCTGGACAGAGACAACGACAGCCAGATCAACTTTGATGAGTTCACGGCTattttcaAGGATATGAAGGACGACCGCATGGCCCAGGGTTTCAAGAAAGCTCTGAACAAGAAACAAGGCATCGTGGCCATCGGGGGCACCAGCGAGATCTCTAGTGCAGGAACTCAGCATTCCATCTCTGAACAGGAGCGCTATGCCTTCGCCAACTACATCAACTCTACTTTGGAAAAGGATCCAGACTGTAAGCACCTGCTGCCCATCAACCCCGAAACTGAAGCTCTGTTTAAAGCAGTGGCTGACGGCGTCATCCTTTGTAAACTCATCAACCTCTCTGTCGCTGACACCATCGATGAGAGAACCATTAATAAAAAGAAACTGACAGCTTTCACCACACAGGAGAATCTGAACTTGGCTCTGAATTCCGCCTCGGCCATCGGCTGCCAAGTTGTCAACATCGGAGCTCAAGATCTGAAGGAGGGAAAACCTCACCTGGTGCTCGGACTCCTCTGGCAGATTATCAAGATAGGACTGTTCGCTGCTATAGAGCTGAGCCGCAATGAAGCTATAGCAGCGCTGCTGGAGGAAGGGGAGAGTCTGGAAGAACTGATGAAACTCAGTCCTgaggagctgctgctgcgctgggCCAATTTCCATTTAAAGAAAGCCGGCATGTCCATATCAAACTTTTCTGGAGATATTAAGGACTCCAAGGCGTACTTCCACCTGCTAGAACAGATTGCTCCAGATGGCAGCAAAGAGGACGTTCCCCGGATTGAGATCGACATGACTGGTCTTTATGAGAAGGATCTCACGAAGAGAGCGGAGTGTATGCTCAAACAGGCCGAGCGCCTCGGCTGCAGACAGTTTGTAACTGCCACCGACGTCGTGTCTGGAAACTCAAAGCTCAACATGGCCTTCGTAGCCAAGCTCTTCAACAAATACCCGGCTCTCACCAAACCAGACAACCAAGACTGGAATAATGTGGAGAGCGAGACCAGAGAGGAGAGAACTTTCAGGAACTGGATGAACTCTCTCGGAGTCAGTCCACACGTTCACCATATCTACGGTGATCTGCAGGATGCCATGGTGATTCTCCAGCTCTATAAAACGATTAAGGTGCCAGTGGACTGGGACAAAGTCAACCAACCTCCATTCAAGGGAAAAGGAGCAGGGCATTTAAAAAagatggAAAACTGTACCTATGCTGTGGAGCTGGGTAAGAAGAAAGCTGGTTTCTCCCTGGTGGGAATTGGCGGACAGGACCTCTACGATGGAAATCCAACTCTAACTCTGGCACTGGTGTGGCAGCTGATGAGGAGGTACACATTAAATGTTCTTGAAGACCTCGGGCACGGAGCAGTTGCAGGAGATGATTTGATAGTTTCATGGGTCAACAAGACTTTGGCTGAGGCTGGCAAGAGTTCCTCTATCAAAAGCTTTAAGGACAAAGCAATCGGTACCAGTATGCCGGTTCTGGACCTGATTGATGCCATTCAGCCACAAAGTGTGAACTTTGAGCTGGTTCAAAAAGGAAGTCTGTCAGACGAAGACAAACTAAACAATGCCAAGTATGCCATTTCCATGGCGAGGAAGATCGGGGCGAAAGTCTACGCTCTGCCTGAGGACCTGGTAGAGATTAACCCGAAAATGGTGATGACCATCTTCGCCTGCTTGATGGGGAGAGGGATGAAGAGGGCTTAAAGGACAGACCAACATACTGACTGTCTTCGCCCGTGTGATTTAATGAGACATAAAGAGAGTTAACATA
>XM_039813830.1
TCCGCGAGGCGGGCTGTCCTTTGCCCGGATACCAGATCAGAGAACTGCTTCAGAAGCTGGACAGAGACAACGACAGCCAGATCAACTTTGATGAGTTCACGGCTGTAGattttcaAGGATATGAAGGACGACCGCATGGCCCAGGGTTTCAAGAAAGCTCTGAACAAGAAACAAGGCATCGTGGCCATCGGGGGCACCAGCGAGATCTCTAGTGCAGGAACTCAGCATTCCATCTCTGAACAGGAGCGCTATGCCTTCGCCAACTACATCAACTCTACTTTGGAAAAGGATCCAGACTGTAAGCACCTGCTGCCCATCAACCCCGAAACTGAAGCTCTGTTTAAAGCAGTGGCTGACGGCGTCATCCTTTGTAAACTCATCAACCTCTCTGTCGCTGACACCATCGATGAGAGAACCATTAATAAAAAGAAACTGACAGCTTTCACCACACAGGAGAATCTGAACTTGGCTCTGAATTCCGCCTCGGCCATCGGCTGCCAAGTTGTCAACATCGGAGCTCAAGATCTGAAGGAGGGAAAACCTCACCTGGTGCTCGGACTCCTCTGGCAGATTATCAAGATAGGACTGTTCGCTGCTATAGAGCTGAGCCGCAATGAAGCTATAGCAGCGCTGCTGGAGGAAGGGGAGAGTCTGGAAGAACTGATGAAACTCAGTCCTgaggagctgctgctgcgctgggCCAATTTCCATTTAAAGAAAGCCGGCATGTCCATATCAAACTTTTCTGGAGATATTAAGGACTCCAAGGCGTACTTCCACCTGCTAGAACAGATTGCTCCAGATGGCAGCAAAGAGGACGTTCCCCGGATTGAGATCGACATGACTGGTCTTTATGAGAAGGATCTCACGAAGAGAGCGGAGTGTATGCTCAAACAGGCCGAGCGCCTCGGCTGCAGACAGTTTGTAACTGCCACCGACGTCGTGTCTGGAAACTCAAAGCTCAACATGGCCTTCGTAGCCAAGCTCTTCAACAAATACCCGGCTCTCACCAAACCAGACAACCAAGACTGGAATAATGTGGAGAGCGAGACCAGAGAGGAGAGAACTTTCAGGAACTGGATGAACTCTCTCGGAGTCAGTCCACACGTTCACCATATCTACGGTGATCTGCAGGATGCCATGGTGATTCTCCAGCTCTATAAAACGATTAAGGTGCCAGTGGACTGGGACAAAGTCAACCAACCTCCATTCAAGGGAAAAGGAGCAGGGCATTTAAAAAagatggAAAACTGTACCTATGCTGTGGAGCTGGGTAAGAAGAAAGCTGGTTTCTCCCTGGTGGGAATTGGCGGACAGGACCTCTACGATGGAAATCCAACTCTAACTCTGGCACTGGTGTGGCAGCTGATGAGGAGGTACACATTAAATGTTCTTGAAGACCTCGGGCACGGAGCAGTTGCAGGAGATGATTTGATAGTTTCATGGGTCAACAAGACTTTGGCTGAGGCTGGCAAGAGTTCCTCTATCAAAAGCTTTAAGGACAAAGCAATCGGTACCAGTATGCCGGTTCTGGACCTGATTGATGCCATTCAGCCACAAAGTGTGAACTTTGAGCTGGTTCAAAAAGGAAGTCTGTCAGACGAAGACAAACTAAACAATGCCAAGTATGCCATTTCCATGGCGAGGAAGATCGGGGCGAAAGTCTACGCTCTGCCTGAGGACCTGGTAGAGATTAACCCGAAAATGGTGATGACCATCTTCGCCTGCTTGATGGGGAGAGGGATGAAGAGGGCTTAAAGGACAGACCAACATACTGACTGTCTTCGCCCGTGTGATTTAATGAGACATAAAGAGAGTTAACATA
>XM_039813831.1
GGGGCGGAGCGGTTCTCCCTACCGGGCGGTGTCAGCTGGAGAAAACGGGAcggaggagcagtgagaggccGACACAGGAGGGACTCATTTCCCCGGCTGATTGTTCTCACTGCACCAGCGGACTCCAGGTGTCAGCATGTCGACAAACATAAGCGCCGAGGAGATGGCGGAGATGAGGGAGGCTTTCCAGAAAGTGGATTCGGACGGCAATGGGTACATCGTCTCCTCTGAACTCGGCGATCTCTTCCGCGAGGCGGGCTGTCCTTTGCCCGGATACCAGATCAGAGAACTGCTTCAGAAGCTGGACAGAGACAACGACAGCCAGATCAACTTTGATGAGTTCACGGCTattttcaAGGATATGAAGGACGACCGCATGGCCCAGGGTTTCAAGAAAGCTCTGAACAAGAAACAAGGCATCGTGGCCATCGGGGGCACCAGCGAGATCTCTAGTGCAGGAACTCAGCATTCCATCTCTGAACAGGAGCGCTATGCCTTCGCCAACTACATCAACTCTACTTTGGAAAAGGATCCAGACTGTAAGCACCTGCTGCCCATCAACCCCGAAACTGAAGCTCTGTTTAAAGCAGTGGCTGACGGCGTCATCCTTTGTAAACTCATCAACCTCTCTGTCGCTGACACCATCGATGAGAGAACCATTAATAAAAAGAAACTGACAGCTTTCACCACACAGGAGAATCTGAACTTGGCTCTGAATTCCGCCTCGGCCATCGGCTGCCAAGTTGTCAACATCGGAGCTCAAGATCTGAAGGAGGGAAAACCTCACCTGGTGCTCGGACTCCTCTGGCAGATTATCAAGATAGGACTGTTCGCTGCTATAGAGCTGAGCCGCAATGAAGCTATAGCAGCGCTGCTGGAGGAAGGGGAGAGTCTGGAAGAACTGATGAAACTCAGTCCTgaggagctgctgctgcgctgggCCAATTTCCATTTAAAGAAAGCCGGCATGTCCATATCAAACTTTTCTGGAGATATTAAGGACTCCAAGGCGTACTTCCACCTGCTAGAACAGATTGCTCCAGATGGCAGCAAAGAGGACGTTCCCCGGATTGAGATCGACATGACTGGTCTTTATGAGAAGGATCTCACGAAGAGAGCGGAGTGTATGCTCAAACAGGCCGAGCGCCTCGGCTGCAGACAGTTTGTAACTGCCACCGACGTCGTGTCTGGAAACTCAAAGCTCAACATGGCCTTCGTAGCCAAGCTCTTCAACAAATACCCGGCTCTCACCAAACCAGACAACCAAGACTGGAATAATGTGGAGAGCGAGACCAGAGAGGAGAGAACTTTCAGGAACTGGATGAACTCTCTCGGAGTCAGTCCACACGTTCACCATATCTACGGTGATCTGCAGGATGCCATGGTGATTCTCCAGCTCTATAAAACGATTAAGGTGCCAGTGGACTGGGACAAAGTCAACCAACCTCCATTCAAGGGAAAAGGAGCAGGGCATTTAAAAAagTGTAAACGACCACCAAGACACATTGTGATCCGATCACTCTAACCACTTTCTGAGGTGGTCTGGGATACCTAAACACTAATGTGTCCTGATGCGTTGCGGACAAAGACGTAACAGGAAATAAGGTCATCAATGCCGGACGCGGTGGTTGTTTTGGTGACCATTTTACAGCGAGTTGGACAAAGTTGTGTGACTGCGTTGGCTTCTGCTGACGGCGATATCTCCAGATGTACCAACCCAATCTCTAACAGGACTGGCGAGAGAATGGACGTTATAATTGTGCGCAGGGCCCTTTTACCTTCTAGCGGAGTTAACGTGGGTCGTCATGAGATCTGAACACACGTGGTCAGCGATGCGTCTCGGCTATCCACTTGTGTTCCGATCACcgaattaaaacaaaatgtgaacAGGGTGTTAGTCTTGCTTGATCAACTGAGTTTATCATAAAATATactaactttgtgtgtgtgtgtg

Function

NR:

description
PREDICTED: plastin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813829.1 True 2066 mRNA 0.51 16 5920351 5946550
XM_039813830.1 False 1825 mRNA 0.49 14 5920351 5936773
XM_039813831.1 False 1954 mRNA 0.51 13 5924873 5946550

Neighbor

gene id symbol gene type direction distance location
LOC120567039 LOC103361901,LOC100704274 coding downstream 5614 5909740 ~ 5914737 (-)
LOC120567038 LOC104958725 coding downstream 19055 5897142 ~ 5901296 (-)
LOC120567274 NA coding downstream 66805 5851783 ~ 5853546 (-)
LOC120566289 fgl1 coding downstream 173713 5732226 ~ 5746638 (-)
snx25 snx25 coding downstream 189116 5703901 ~ 5731235 (-)
ptcd3 ptcd3,LOC102784107,LOC104953014 coding upstream 9514 5956064 ~ 5974484 (-)
LOC120567409 NA coding upstream 1164698 7111248 ~ 7112332 (-)
LOC120567393 NA coding upstream 1166145 7112695 ~ 7113960 (-)
trnam-cau_10 NA coding upstream 1175503 7122053 ~ 7122125 (-)
trnam-cau_11 NA coding upstream 1177053 7123603 ~ 7123675 (-)
G103621 NA non-coding downstream 25193 5894819 ~ 5895158 (-)
G103618 NA non-coding downstream 32267 5887551 ~ 5888084 (-)
G103612 NA non-coding downstream 54891 5864980 ~ 5865460 (-)
G103519 NA non-coding downstream 398963 5517147 ~ 5521388 (-)
G103513 NA non-coding downstream 430494 5489629 ~ 5489857 (-)
G103657 NA non-coding upstream 53539 6000089 ~ 6001998 (-)
G103661 NA non-coding upstream 64218 6010768 ~ 6021714 (-)
G103694 NA non-coding upstream 142512 6089062 ~ 6109745 (-)
G103712 casp3,LOC104959742 non-coding upstream 198996 6145546 ~ 6169247 (-)
G103731 NA non-coding upstream 312161 6258711 ~ 6259004 (-)
G103434 LOC102212171 other downstream 1334267 4575782 ~ 4586084 (-)
myot LOC103355626,LOC104955473 other downstream 1344675 4554225 ~ 4575676 (-)
fmr1 fmr1,LOC102779310 other downstream 1462524 4426517 ~ 4457827 (-)
LOC120567378 NA other downstream 1520293 4320649 ~ 4400058 (-)
smim19 smim19 other downstream 1987131 3928930 ~ 3933220 (-)
LOC120566343 NA other upstream 810242 6756792 ~ 6759576 (-)
G103806 NA other upstream 1339909 7286459 ~ 7286972 (-)
LOC120567361 NA other upstream 3220740 9167290 ~ 9177633 (-)
abhd18 abhd18 other upstream 3409162 9355712 ~ 9457863 (-)
LOC120566283 magt1,LOC102791632 other upstream 3617449 9563999 ~ 9569926 (-)

Expression


Co-expression Network