LOC120567058


Basic Information

Item Value
gene id LOC120567058
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 27851687 ~ 27865367 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813847.1
AGATAAATGTATTGCCACCACACCCTTATTGTATGTGTCTACAGTGAGCCAGTTAGCAACTGCTAGGGGCTATCTCTTTTCTACGTGGGTTTACAAGGACTCTGTGCTCTTTTAGAGAGCATGGGCACTGCATGAGATAGGGCAGGTAGAGTACACATTTTAATCAAAAGCATGGCAAATCACTGGCACATAGTGTATCTGTTGGGTTTCTGGCACCTCCAGACTCTAAATGTTGCAGCTTTCAATCTGGACACCCAGAGTGTGCTGCAGAGAAATGGAGATCCAGGAAGCCTGTTTGGATTTTCTGTTGCCTTTCACCAGCAGCTGAACCCAGCCAGAAAGAACATatTGCTTGTCGGAGCACCACGGTCAAAACACCACAACCAAGTGAATGTTACAGGTGTTGTTTACCAGTGTGATCTGACTACAGCATCTGACCACTGTCGGCCCATTGAGTTTGATAACGAAGagttCCTTGATAGTAAAGGCATAAACAACCAGTGGATGGGAGTTAGAGTGACGAGCCAAGGTCCTGGTAAAAATGTAATGACCTGTGCCCATCGATACCAGGAGTGGAGCCCGAGTCCGAGCCTTTATGTCCCTCAGTTGGTAACGGGTCAGTGTTACCTCTTAGGAGATGACCTGCAGGTCGGGAAGGAAGAGGGGATGTGGAGGAGGGTAGTTTGTGACTCTGAGCACCTGACCAGACGTCAAAAGAACCATGACTGGTTTGCATACTGCCAACAGGGTCATGGAGCATCTTTTGCAAAGGACAACACATCTCTGATATTCGGAGCGCCAGGAGCATACCAGTGGAAAGGAATCGTACGAATGGAGCGCTTGGACAACCAGGGCATCATCGGTGCCGATGCTCGTGAGACTGGAGATATTGAAAAGTTTAACTCAACACTCATTCCTCTCCAAAGTAACAGCTACTTGGGATTCTCCACTGACTCTGGTATGGCCCTCATCAGACAGGGTGAGCTAACCATCGTATCAGGAGCGCCCAGAGGAGGTTACAGCGGCCAGGTGACATTTCTTAAGGCAGACCCTGTGGCAAAGAAAAGTTTGTCTGTGGAGTTAGTCCTCTCCGGTCCGGGCCTGGCCTCCTCCTTTGGCTACGATGTAGCAGTGGTGGATCTCAATGGTGATGGGTGGGAGGACCTCGCTGTTGGAGCACCGGAGTTTTTTGTTAAAGATGGTTTGGTTGGAGGAGCAGTCTACATTTATATCAACAGTAAAGGAAAAAACTGGGAGAAGATTGTTCCAACTGAAGTTCTTGGACCTAAAGATTCCATGTTCGGCCTCGCAGTGGAAAACATAGGAGACATCAATCAAGATAGTTATGGAGATATTGCCGTGGGGGCACCATATGATGGTTCAGGTCGAGTATACCTTTATTACGGCTCATCAGATGGAATCAACAAAAAGCCAGCGCAGGTACTCTCATCGGGATCCAATAAAGTTACTCTGTTTGGATATTCTCTGTCTGGCAACTTGGACGTGGATAACAATCAGTACCCTGATCTGGCTGTTGGATCTCTGTCTGATTCCGTCTTTGTTTACAGAGCAAGACCAGTGGTCACTGTCAGCAGCTCTCTGAAGGTAACACCAGCTGATATAGACATCACAAATGAACAATGTGATAAACGCACATGTAACTTTGCAGCTCTGGCATGCTTTACCTACACAGCACATCCAGCATCGTTCAACCCTAAACTGATGATTGACTTCACTTTTGAGGCTGATGCTGAGAGGAGAAAAGCGAGGCTTCCTCCTAGAGTGGTTTTTCAGGGTTCTTCTCGAGGAAGGCTGGAGCTGCCTGGACAGAATAGACAAATCTGTACTGGCACCCAGCTCCAACTTCTGCATGATATCAAGGACAGGCTGCACAGTATTCCTGTCTCCGTCACTATGTCTTTGTGGAACTCCAGTCAAACAACCAGGACGAGTGCAGATCTGCCCATTCTTACTCCTGTCCTCAACCTCTTCCAGCAAAAGAGCACCGACTCAGCGATTATCTTAATAAACAAGGGCTGTGGCAGGGACAACGTTTGCCAAAGTAACCTAGAGTTACAGTACAAGTTCTGCTCGAGAAAAATGCTAAATAATCAAGATGTTTTCGAATCACTCGCCAGAGAGGATGGTGGTGCAGTCATCAATCCTTCTGATGAAGCTATAGCTTTAGAGATCactgtgactaacagaaatgggGATGACGCACACCAGAGTCGTTCAGTCATCAGCCTCCCAGATACTCTTCATTACTCTTCTATTGTCTGCAGTAAAGCATCGGAAACACAAGTGAGTTGTACAGCCAATGATAAAGGCACACTTATAAACTGTGAACTGGGGAATCCACTCCAAAGAGATGCTGAAGTTACTTTTTATGTCATACTCTTAACATCCGGCATATCACTGAGTACAACAGACGTCAACGTCACCCTGCAACTTGAAACGACAAGTACACAGACCATACAACCGGTTGAGGCTTTAGCAAAAGTGATTTTTGAACTGGAGCTGCAAGTAGATGGACTAGCCAGGCCCTCTCAGGTGTCACTTGGCGAAAACTTGAGGGGTGAGAGCGCCATAAAATCAGTGAATGAAAGTGGAACTCCGGTTCAATATGAATTTAGGATAACAAATTTGGGCAGACCACTGAAATCTTTCGCCAATGCATCACTAAACATCAACTGGCCAAAGGAGAACTCTGTAGGAAAATGGCTTCTGTACTTGACTCAGATCAGTAGTAAAGGTGTACAGTCGGTCCACTGCTCACCTGTGAACGAGGTCAATCCACTTAAGCATGCTAAGGGTTGGCGTGACCCCTCGAGGAAAAGACGCGAAGCTGAACACAAGGCTCTCTTTACTGATGGATTCCCATTTCTTCCAAAGAGAAGGAAATACAAAACCtttACCTGTTCAGATGGACTGAAGTGTGTTCAGATATGCTGCCCTCTGCTGGGATTGGACAGTACTGCAGTAATGGTTCTTAACGCGCACCTCTGGAACACCACTTTGACAGAGGATTACAGCTCTTTGAACTACCTagacattgttgtggatgctacTCTTAGTTTAACAAACTCTCCAGAGAATATTGGACTTAAACCGGAAATGCTTGGGACAAAGGTAAAACTGACAGTGTTCCTCGAGAGGAAGGCTGAATATTTCACCAAAGTAGCCTGGTGGATAATCTTCCTGACGGTCATTGCATTGCTCCTGTTGTTGGCAGTTCTTGGCTTCTTGTTGTGGAAGCGGGGATGCATCAACTGCCTCGCTCAGAACAAGAATCCCTCCCATGATGGAGATCCAAACACAGAGACTGCTCCCCTTAAAGGCTAAAATGAAACCAGAGACCCTAGCGGTATGAGACACGTGCCGTGAACACAAGATGTTAACCGTATGATTCTGGCTCAAATATACTAGTGCAGAATTACATGATAATACATGATTTGTTGGGACATCTTTGATGCAGagccttttttgtatttttggtgCATGTTTCTGCTacgttatataaaaaaaaaaaaaaaccacaaataatattttgagttttttttaatgaagcagaaaataTCACTTGTTTAATACCAAAAAACTGTTACAACATGAAAAAAGTTGTGCTATACTTTGACCATGACGGAATGTGCGAGTGGTGGGGATGGATGAGGGGGTTGTACTACAGAACAATTTACCTGAAATAGAATTGAAATATTGCAGCCACCACATCCTAATGTGACTGCTGATCATTAAAAAGCACATATGATTACAATGTTGTCTTTGAAA
>XM_039813848.1
AAGATAAATGTATTGCCACCACACCCTTATTGTATGTGTCTACAGTGAGCCAGTTAGCAACTGCTAGGGGCTATCTCTTTTCTACGTGGGTTTACAAGGACTCTGTGCTCTTTTAGAGAGCATGGGCACTGCATGAGATAGGGCAGGTAGAGTACACATTTTAATCAAAAGCATGGCAAATCACTGGCACATAGTGTATCTGTTGGGTTTCTGGCACCTCCAGACTCTAAATGTTGCAGCTTTCAATCTGGACACCCAGAGTGTGCTGCAGAGAAATGGAGATCCAGGAAGCCTGTTTGGATTTTCTGTTGCCTTTCACCAGCAGCTGAACCCAGCCAGAAAGAACATatTGCTTGTCGGAGCACCACGGTCAAAACACCACAACCAAGTGAATGTTACAGGTGTTGTTTACCAGTGTGATCTGACTACAGCATCTGACCACTGTCGGCCCATTGAGTTTGATAACGAAGagttCCTTGATAGTAAAGGCATAAACAACCAGTGGATGGGAGTTAGAGTGACGAGCCAAGGTCCTGGTAAAAATGTAATGACCTGTGCCCATCGATACCAGGAGTGGAGCCCGAGTCCGAGCCTTTATGTCCCTCAGTTGGTAACGGGTCAGTGTTACCTCTTAGGAGATGACCTGCAGGTCGGGAAGGAAGAGGGGATGTGGAGGAGGGTAGTTTGTGACTCTGAGCACCTGACCAGACGTCAAAAGAACCATGACTGGTTTGCATACTGCCAACAGGGTCATGGAGCATCTTTTGCAAAGGACAACACATCTCTGATATTCGGAGCGCCAGGAGCATACCAGTGGAAAGGAATCGTACGAATGGAGCGCTTGGACAACCAGGGCATCATCGGTGCCGATGCTCGTGAGACTGGAGATATTGAAAAGTTTAACTCAACACTCATTCCTCTCCAAAGTAACAGCTACTTGGGATTCTCCACTGACTCTGGTATGGCCCTCATCAGACAGGGTGAGCTAACCATCGTATCAGGAGCGCCCAGAGGAGGTTACAGCGGCCAGGTGACATTTCTTAAGGCAGACCCTGTGGCAAAGAAAAGTTTGTCTGTGGAGTTAGTCCTCTCCGGTCCGGGCCTGGCCTCCTCCTTTGGCTACGATGTAGCAGTGGTGGATCTCAATGGTGATGGGTGGGAGGACCTCGCTGTTGGAGCACCGGAGTTTTTTGTTAAAGATGGTTTGGTTGGAGGAGCAGTCTACATTTATATCAACAGTAAAGGAAAAAACTGGGAGAAGATTGTTCCAACTGAAGTTCTTGGACCTAAAGATTCCATGTTCGGCCTCGCAGTGGAAAACATAGGAGACATCAATCAAGATAGTTATGGAGATATTGCCGTGGGGGCACCATATGATGGTTCAGGTCGAGTATACCTTTATTACGGCTCATCAGATGGAATCAACAAAAAGCCAGCGCAGGTACTCTCATCGGGATCCAATAAAGTTACTCTGTTTGGATATTCTCTGTCTGGCAACTTGGACGTGGATAACAATCAGTACCCTGATCTGGCTGTTGGATCTCTGTCTGATTCCGTCTTTGTTTACAGAGCAAGACCAGTGGTCACTGTCAGCAGCTCTCTGAAGGTAACACCAGCTGATATAGACATCACAAATGAACAATGTGATAAACGCACATGTAACTTTGCAGCTCTGGCATGCTTTACCTACACAGCACATCCAGCATCGTTCAACCCTAAACTGATGATTGACTTCACTTTTGAGGCTGATGCTGAGAGGAGAAAAGCGAGGCTTCCTCCTAGAGTGGTTTTTCAGGGTTCTTCTCGAGGAAGGCTGGAGCTGCCTGGACAGAATAGACAAATCTGTACTGGCACCCAGCTCCAACTTCTGCATGATATCAAGGACAGGCTGCACAGTATTCCTGTCTCCGTCACTATGTCTTTGTGGAACTCCAGTCAAACAACCAGGACGAGTGCAGATCTGCCCATTCTTACTCCTGTCCTCAACCTCTTCCAGCAAAAGAGCACCGACTCAGCGATTATCTTAATAAACAAGGGCTGTGGCAGGGACAACGTTTGCCAAAGTAACCTAGAGTTACAGTACAAGTTCTGCTCGAGAAAAATGCTAAATAATCAAGATGTTTTCGAATCACTCGCCAGAGAGGATGGTGGTGCAGTCATCAATCCTTCTGATGAAGCTATAGCTTTAGAGATCactgtgactaacagaaatgggGATGACGCACACCAGAGTCGTTCAGTCATCAGCCTCCCAGATACTCTTCATTACTCTTCTATTGTCTGCAGTAAAGCATCGGAAACACAAGTGAGTTGTACAGCCAATGATAAAGGCACACTTATAAACTGTGAACTGGGGAATCCACTCCAAAGAGATGCTGAAGTTACTTTTTATGTCATACTCTTAACATCCGGCATATCACTGAGTACAACAGACGTCAACGTCACCCTGCAACTTGAAACGACAAGTACACAGACCATACAACCGGTTGAGGCTTTAGCAAAAGTGATTTTTGAACTGGAGCTGCAAGTAGATGGACTAGCCAGGCCCTCTCAGGTGTCACTTGGCGAAAACTTGAGGGGTGAGAGCGCCATAAAATCAGTGAATGAAAGTGGAACTCCGGTTCAATATGAATTTAGGATAACAAATTTGGGCAGACCACTGAAATCTTTCGCCAATGCATCACTAAACATCAACTGGCCAAAGGAGAACTCTGTAGGAAAATGGCTTCTGTACTTGACTCAGATCAGTAGTAAAGGTGTACAGTCGGTCCACTGCTCACCTGTGAACGAGGTCAATCCACTTAAGCATGCTAAGGGTTGGCGTGACCCCTCGAGGAAAAGACGCGAAGCTGAACACAAGGCTCTCTTTACTGATGGATTCCCATTTCTTCCAAAGAGAAGGAAATACAAAACCtttACCTGTTCAGATGGACTGAAGTGTGTTCAGATATGCTGCCCTCTGCTGGGATTGGACAGTACTGCAGTAATGGTTCTTAACGCGCACCTCTGGAACACCACTTTGACAGAGGTAAAACTGACAGTGTTCCTCGAGAGGAAGGCTGAATATTTCACCAAAGTAGCCTGGTGGATAATCTTCCTGACGGTCATTGCATTGCTCCTGTTGTTGGCAGTTCTTGGCTTCTTGTTGTGGAAGCGGGGATGCATCAACTGCCTCGCTCAGAACAAGAATCCCTCCCATGATGGAGATCCAAACACAGAGACTGCTCCCCTTAAAGGCTAAAATGAAACCAGAGACCCTAGCGGTATGAGACACGTGCCGTGAACACAAGATGTTAACCGTATGATTCTGGCTCAAATATACTAGTGCAGAATTACATGATAATACATGATTTGTTGGGACATCTTTGATGCAGagccttttttgtatttttggtgCATGTTTCTGCTacgttatataaaaaaaaaaaaaaaccacaaataatattttgagttttttttaatgaagcagaaaataTCACTTGTTTAATACCAAAAAACTGTTACAACATGAAAAAAGTTGTGCTATACTTTGACCATGACGGAATGTGCGAGTGGTGGGGATGGATGAGGGGGTTGTACTACAGAACAATTTACCTGAAATAGAATTGAAATATTGCAGCCACCACATCCTAATGTGACTGCTGATCATTAAAAAGCACATATGATTACAATGTTGTCTTTGAAA

Function

GO:

id name namespace
GO:0007229 integrin-mediated signaling pathway biological_process
GO:0007155 cell adhesion biological_process
GO:0008305 integrin complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813847.1 True 3789 mRNA 0.45 25 27851687 27865366
XM_039813848.1 False 3685 mRNA 0.45 24 27851687 27865367

Neighbor

gene id symbol gene type direction distance location
LOC120566545 NA coding downstream 15458 27815285 ~ 27836229 (-)
mcm7 mcm7 coding downstream 37498 27803358 ~ 27814189 (-)
LOC120566642 LOC107379338,LOC102290741,LOC103367381,LOC102209025 coding downstream 49351 27799826 ~ 27802336 (-)
trnal-aag_2 NA coding downstream 72473 27779133 ~ 27779214 (-)
bod1l1 bod1l1,LOC107705061 coding downstream 81432 27756523 ~ 27770255 (-)
LOC120566982 NA coding upstream 43553 27908920 ~ 27910963 (-)
LOC120566987 NA coding upstream 49711 27915078 ~ 27917448 (-)
LOC120566989 NA coding upstream 60057 27925424 ~ 27927535 (-)
LOC120566988 NA coding upstream 68927 27934294 ~ 27936535 (-)
LOC120566990 NA coding upstream 74690 27940057 ~ 27942346 (-)
G108353 NA non-coding downstream 78706 27772676 ~ 27772981 (-)
G108352 NA non-coding downstream 79616 27771851 ~ 27772071 (-)
G108351 NA non-coding downstream 92992 27757793 ~ 27758695 (-)
LOC120567396 NA non-coding downstream 455656 27394158 ~ 27396031 (-)
G108194 NA non-coding downstream 760012 27091382 ~ 27091675 (-)
LOC120566995 NA non-coding upstream 102697 27968064 ~ 27970362 (-)
G108422 NA non-coding upstream 115683 27981050 ~ 27981447 (-)
G108424 NA non-coding upstream 116591 27981958 ~ 27982329 (-)
LOC120566994 NA non-coding upstream 138167 28003534 ~ 28004849 (-)
LOC120566468 NA non-coding upstream 230281 28095648 ~ 28096127 (-)
LOC120567057 NA other downstream 12580 27837568 ~ 27839107 (-)
aurkb fbxl12,LOC103367279,LOC104928693,LOC101076892,LOC103149573 other downstream 61476 27780132 ~ 27790211 (-)
atp8a1 atp8a1,LOC102786596 other downstream 473566 27269370 ~ 27378121 (-)
LOC120567151 bend4,LOC102786006 other downstream 588986 27252395 ~ 27262701 (-)
LOC120566767 NA other downstream 755790 27068521 ~ 27095897 (-)
LOC120566991 NA other upstream 86889 27952256 ~ 27955694 (-)
G108433 neto1,LOC101071133 other upstream 156370 28021737 ~ 28023229 (-)
LOC120566547 NA other upstream 159203 28024570 ~ 28038700 (-)
fam13b fam13b,LOC102777128 other upstream 849496 28714863 ~ 28795508 (-)
cxcl14 cxcl14 other upstream 931931 28797298 ~ 28807994 (-)

Expression


Co-expression Network