ppp2r2ba (ppp2r2b,LOC107086445,LOC104946885,LOC100708080)


Basic Information

Item Value
gene id ppp2r2ba
gene name ppp2r2b,LOC107086445,LOC104946885,LOC100708080
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 14834054 ~ 14882816 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813860.1
CTCTCTGGCTTGCTGTCGCGGCGTCAGTGCGGATGTGGAGCCCGCAACACAACGCTCTCCACCCGTCGGCAAGCATCGGAGAAGAAGATGAAATGTTTTTCCCGTTATCTCCCGTACCTCTTCCGCCCTCCGAGCACCATCCTGTCCTCCACTTGCCACACCGAAGCTGACATTATCTCAACGGTTGAGTTTAACTCATCGGGGGAGCTGTTGGCCACCGGGGATAAAGGAGGCAGAGTGGTTGTCTTCCAAAGGGAGCAGGAGAGTAAGAGCCAGCCCCAACGTCGGGGGGAGTACAATGTTTACAGCACATTCCAGAGCCACGAGCCGGAGTTTGACTACCTGAAGAGTTTGGAGATTGAGGAGAAGATCAACAAGATCAAATGGCTTCCTCAGCAGAACGCCGCCTACTTTCTGCTCTCCACCAACGACAAGACGGTGAAGCTGTGGAAAATCAGCGAGAGAGACAAGCGTCCAGAGGGCTACAACCTGAAGGATGACGACGGACGGATCAGAGACCCGTCGACCATCACCTCGCTACGGGTGCCGGTGCTGCAGCCCATGGACTTGATGGTTGAGGCTACAGCCAGGCGTGTATTCAGCAATGCCCACACCTACCACATCAACTCCATCTCTGTCAACTCGGACCTTCAGACGTACATCTCCACCGACGACCTCAGGGTGAACCTGTGGAACCTGGAGATCACCGATCGCAGCTTCAACATTGTGGACATCAAGCCAGCCAACATGGAGGAGCTGACGGAGGTGATCACTTCAGCAGAGTTCCATCCCCAGCAGTGTCACACCTTTGCCTACAGCAGCAGCAAGGGCTCAATACGCCTCTGTGATATGAGAGAGGCTGCACTCTGCGACAAACACTGCAAATACTTTGAGGAGCCAGAGGATCCCTCCACTCGCTCCTTTTTCTCTGAAATCATCTCATCCATCTCGGACGTGAAGTTCAGCCACAACGGGCGATACCTGATGACACGGGACTACCTCACTGTCAAGGTGTGGGACCTTCAAATGGAGAACAAACCACTAGAGACATACCAGgttcatgactatttacgtGGCAAACTTTGCTCTCTGTATGAGAATGACTGCATCTTTGACAAGTTTGAGTGTGTCTGGAATGGATCAGACAGCGTAATAATGACCGGCTCCTACAACAACTTTTTCCGAATGTTTGACCGGAACACTAAGCGTGACGTCACACTGGAGGCGTCCAGGGAGAACAGCAAACCCAGAGCCATTCTTAAGCCTCGCAAGGTGTGTGTAGGTGGGAAGCGACGTAAGGATGAGATCAGTGTAGACAGCCTTGACTTCAGCAAGAAGATCCTACACACTACGTGGCACCCGCATGAGAACATCATCGCTGTAGCGGCCACCAACAACCTCTACATCTTCCAAGACAAAGTCAACTAAAGCTGCTGACCCctgacccccacacacacac
>XM_039813862.1
GTCATCATCACCGGTATTTGATCGTGATTGTGTTGATTACACCGGAGATCTGGAGCCATGACAGGCCCCCCGCTGGTCCCACGGCCCGCCTGCTGACTGTGTCGGGCAGGATGGGAGCAGGTCTGCAGCTTTCAGGATCCCGAACCAGCCGATTTATCaatggaggaggagagtgacacCCGGAAAATCAACAACAGCTTCCTTCGCGACCACAACTATGCCACCGAAGCTGACATTATCTCAACGGTTGAGTTTAACTCATCGGGGGAGCTGTTGGCCACCGGGGATAAAGGAGGCAGAGTGGTTGTCTTCCAAAGGGAGCAGGAGAGTAAGAGCCAGCCCCAACGTCGGGGGGAGTACAATGTTTACAGCACATTCCAGAGCCACGAGCCGGAGTTTGACTACCTGAAGAGTTTGGAGATTGAGGAGAAGATCAACAAGATCAAATGGCTTCCTCAGCAGAACGCCGCCTACTTTCTGCTCTCCACCAACGACAAGACGGTGAAGCTGTGGAAAATCAGCGAGAGAGACAAGCGTCCAGAGGGCTACAACCTGAAGGATGACGACGGACGGATCAGAGACCCGTCGACCATCACCTCGCTACGGGTGCCGGTGCTGCAGCCCATGGACTTGATGGTTGAGGCTACAGCCAGGCGTGTATTCAGCAATGCCCACACCTACCACATCAACTCCATCTCTGTCAACTCGGACCTTCAGACGTACATCTCCACCGACGACCTCAGGGTGAACCTGTGGAACCTGGAGATCACCGATCGCAGCTTCAACATTGTGGACATCAAGCCAGCCAACATGGAGGAGCTGACGGAGGTGATCACTTCAGCAGAGTTCCATCCCCAGCAGTGTCACACCTTTGCCTACAGCAGCAGCAAGGGCTCAATACGCCTCTGTGATATGAGAGAGGCTGCACTCTGCGACAAACACTGCAAATACTTTGAGGAGCCAGAGGATCCCTCCACTCGCTCCTTTTTCTCTGAAATCATCTCATCCATCTCGGACGTGAAGTTCAGCCACAACGGGCGATACCTGATGACACGGGACTACCTCACTGTCAAGGTGTGGGACCTTCAAATGGAGAACAAACCACTAGAGACATACCAGgttcatgactatttacgtGGCAAACTTTGCTCTCTGTATGAGAATGACTGCATCTTTGACAAGTTTGAGTGTGTCTGGAATGGATCAGACAGCGTAATAATGACCGGCTCCTACAACAACTTTTTCCGAATGTTTGACCGGAACACTAAGCGTGACGTCACACTGGAGGCGTCCAGGGAGAACAGCAAACCCAGAGCCATTCTTAAGCCTCGCAAGGTGTGTGTAGGTGGGAAGCGACGTAAGGATGAGATCAGTGTAGACAGCCTTGACTTCAGCAAGAAGATCCTACACACTACGTGGCACCCGCATGAGAACATCATCGCTGTAGCGGCCACCAACAACCTCTACATCTTCCAAGACAAAGTCAACTAAAGCTGCTGACCCctgacccccacacacacac
>XM_039813863.1
ATTAGCCTCTCCTAAATCCAGGCAGATGTATGTCTATGAGAAGGGGAGGAAAAGCTACCTTAAGGCTGACATTATCTCAACGGTTGAGTTTAACTCATCGGGGGAGCTGTTGGCCACCGGGGATAAAGGAGGCAGAGTGGTTGTCTTCCAAAGGGAGCAGGAGAGTAAGAGCCAGCCCCAACGTCGGGGGGAGTACAATGTTTACAGCACATTCCAGAGCCACGAGCCGGAGTTTGACTACCTGAAGAGTTTGGAGATTGAGGAGAAGATCAACAAGATCAAATGGCTTCCTCAGCAGAACGCCGCCTACTTTCTGCTCTCCACCAACGACAAGACGGTGAAGCTGTGGAAAATCAGCGAGAGAGACAAGCGTCCAGAGGGCTACAACCTGAAGGATGACGACGGACGGATCAGAGACCCGTCGACCATCACCTCGCTACGGGTGCCGGTGCTGCAGCCCATGGACTTGATGGTTGAGGCTACAGCCAGGCGTGTATTCAGCAATGCCCACACCTACCACATCAACTCCATCTCTGTCAACTCGGACCTTCAGACGTACATCTCCACCGACGACCTCAGGGTGAACCTGTGGAACCTGGAGATCACCGATCGCAGCTTCAACATTGTGGACATCAAGCCAGCCAACATGGAGGAGCTGACGGAGGTGATCACTTCAGCAGAGTTCCATCCCCAGCAGTGTCACACCTTTGCCTACAGCAGCAGCAAGGGCTCAATACGCCTCTGTGATATGAGAGAGGCTGCACTCTGCGACAAACACTGCAAATACTTTGAGGAGCCAGAGGATCCCTCCACTCGCTCCTTTTTCTCTGAAATCATCTCATCCATCTCGGACGTGAAGTTCAGCCACAACGGGCGATACCTGATGACACGGGACTACCTCACTGTCAAGGTGTGGGACCTTCAAATGGAGAACAAACCACTAGAGACATACCAGgttcatgactatttacgtGGCAAACTTTGCTCTCTGTATGAGAATGACTGCATCTTTGACAAGTTTGAGTGTGTCTGGAATGGATCAGACAGCGTAATAATGACCGGCTCCTACAACAACTTTTTCCGAATGTTTGACCGGAACACTAAGCGTGACGTCACACTGGAGGCGTCCAGGGAGAACAGCAAACCCAGAGCCATTCTTAAGCCTCGCAAGGTGTGTGTAGGTGGGAAGCGACGTAAGGATGAGATCAGTGTAGACAGCCTTGACTTCAGCAAGAAGATCCTACACACTACGTGGCACCCGCATGAGAACATCATCGCTGTAGCGGCCACCAACAACCTCTACATCTTCCAAGACAAAGTCAACTAAAGCTGCTGACCCctgacccccacacacacac

Function

symbol description
ppp2r2b Predicted to enable protein phosphatase regulator activity. Predicted to be involved in peptidyl-serine dephosphorylation; positive regulation of neuron apoptotic process; and regulation of phosphoprotein phosphatase activity. Predicted to be located in mitochondrial outer membrane. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol. Implicated in Alzheimer's disease; brain disease; breast cancer; and spinocerebellar ataxia type 12. Biomarker of systemic lupus erythematosus.

NR:

description
PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2

GO:

id name namespace
GO:0050790 regulation of catalytic activity biological_process
GO:0007165 signal transduction biological_process
GO:0000159 protein phosphatase type 2A complex cellular_component

KEGG:

id description
K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813860.1 False 1459 mRNA 0.53 10 14834054 14882816
XM_039813862.1 True 1522 mRNA 0.53 10 14834054 14855432
XM_039813863.1 False 1358 mRNA 0.52 10 14834054 14847904

Neighbor

gene id symbol gene type direction distance location
gpr151 gpr151 coding downstream 218 14829320 ~ 14833836 (-)
rab33ba LOC103374601,LOC106911658 coding downstream 67859 14761945 ~ 14766195 (-)
trnaa-ugc_8 NA coding downstream 129951 14704032 ~ 14704103 (-)
mmp17b LOC104951499,LOC101483571 coding downstream 136774 14685137 ~ 14697280 (-)
LOC120566517 NA coding downstream 161739 14639653 ~ 14672315 (-)
nkx2.5 nkx2-5 coding upstream 15492 14898308 ~ 14901290 (-)
drd1a drd1,LOC103470866,LOC103144507,LOC106953475 coding upstream 146092 15028908 ~ 15032268 (-)
nek12 NA coding upstream 167320 15050136 ~ 15053250 (-)
LOC120567479 NA coding upstream 245082 15127898 ~ 15132154 (-)
sncb sncb coding upstream 252310 15135126 ~ 15149929 (-)
G104962 hspa9 non-coding downstream 55313 14778207 ~ 14778741 (-)
G104924 NA non-coding downstream 196609 14635107 ~ 14637445 (-)
G104867 NA non-coding downstream 451992 14381645 ~ 14382062 (-)
G104865 hvcn1 non-coding downstream 460609 14369159 ~ 14373445 (-)
G104825 hars,LOC103363215,LOC101173848 non-coding downstream 696147 14131340 ~ 14137907 (-)
G104999 NA non-coding upstream 1043 14883859 ~ 14888207 (-)
G105001 NA non-coding upstream 7777 14890593 ~ 14891511 (-)
LOC120567075 NA non-coding upstream 65577 14948393 ~ 14953055 (-)
G105040 NA non-coding upstream 142200 15025016 ~ 15025409 (-)
G105049 NA non-coding upstream 145534 15028350 ~ 15028866 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other downstream 94561 14735192 ~ 14739493 (-)
uvssa uvssa,LOC104961899,LOC106533076 other downstream 260561 14537100 ~ 14573493 (-)
G104837 NA other downstream 578013 14150492 ~ 14256041 (-)
G104656 NA other downstream 2690310 12142700 ~ 12143744 (-)
G104610 immt,LOC102797104 other downstream 2841376 11964979 ~ 11992678 (-)
rnf44 rnf44 other upstream 206588 15089404 ~ 15108598 (-)
G105086 NA other upstream 250714 15133530 ~ 15134736 (-)
tspan17 tspan17,LOC103361971 other upstream 715527 15598343 ~ 15619108 (-)
hnrnph1 hnrnph1,LOC102791917 other upstream 983244 15866060 ~ 15871949 (-)
unc5a unc5a,LOC102788949 other upstream 1077381 15960197 ~ 16103794 (-)

Expression


Co-expression Network