LOC120567087 (LOC103355704,LOC104949036)


Basic Information

Item Value
gene id LOC120567087
gene name LOC103355704,LOC104949036
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 458620 ~ 460571 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813891.1
AGTTGCAGCACACAGGGCCAAAATAACTACATCTCTACTACTACTAGGGATTAAGGTGTATAGGTGAAAATGGTGCATTCATTATTCTGGCTCCTGCCTCTTTTATACAAAATGTGTCCGGGACATGCTTGGGTGGCAGGTAACTTTCTTATGACGGGACCCAAGGCCTATCTCACCTATGCAAGAAGCGTGCAGAGGGGCGCGCAGGCTGGGATTGAGGAGTGCAAACACCAGTTTGCTTGGGACAGATGGAACTGTCCCGACAGTGCAACTCAGCTCAAAGGACTAAAACGCGCCACCAGAGAGACTTCTTTCATCCACGCTATGAGTGCAGCGGGGGTCATGTACACTCTGACCAGGAACTGTAGTCTGGGAGACCTCGACAACTGCGGCTGTGATGTCTCCAAAAACGGAAAAATTGGCGGCCGTGGCTGGCTGTGGGGTGGCTGTAGTGATAACGTGGATTTCGGAGAGAGGATTTCCAAACAGTACGTGGATGCGCAAGAGACTGGTCAGGACTCCAGGGCTGCTGTCAACCTGCACAACAACGAGGCAGGGCGGCTGGCCGTAAAGGCAACAATGAAGCGCATCTGTAGATGCCATGGCATGTCTGAGAGCTGCAGTGTCCAAACCTGCTGGACACAGCTGTCAGATTTCAGAGAAATCGGCAACTACTTGAAGATCAAGCACGGTCAAGCTCAAAAACTGGACATCGACAAAAAGCGCATGCGGGCTGGCAACAGCGCGGACAACCGAGGTGCCATCGTGGACGCGTTTGGCAGCGTCGCCCAGAcagagctcatctacctggagGACTCCCCGGACTACTGCAGGAAGAACAGCAGCTCGGGACTGCACGGCACCGAGGGCCGGGAGTGCGTGCAGCACGGAGAGGGTTTAACTCAGTGGGAGAGGCGTAGCTGCCGCAGGTTGTGTCATGAATGCGGGCTGAGGGTGGAAGAGAGGCGCACGGAGGTGGTGAGCAGCTGCAACTGCAAATTCCACTGGTGCTGCACGGTGAACTGTGCAGACTGCTCTCAGGTTGTAGTCAAACACGTGTGCGCCGGGAGGGAAGGTGCCGACGGCCACGGTGTTAGACGGAAATACCGTGAACCCAAGTGAGAAAAAATAGTATATGGATCTGTTACCATAGGCTACATCACTGTAAAGTCTGTTGAATAATGGTCCATATCAAGATGTTAAATGTCTGTTTGCACTTTTCATGTCTCCTTTAAAT

Function

NR:

description
PREDICTED: protein Wnt-8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813891.1 True 1237 mRNA 0.53 6 458620 460571

Neighbor

gene id symbol gene type direction distance location
lcp2b NA coding downstream 2401 452088 ~ 456219 (-)
foxi3b foxi1,LOC103355701,LOC103470887,LOC105917079,LOC103132071,LOC106937269 coding downstream 10661 445633 ~ 447959 (-)
LOC120567031 LOC100705418,LOC101464828,LOC102297141 coding downstream 28765 423933 ~ 429855 (-)
sh3tc2 sh3tc2,LOC104962816 coding downstream 122578 311932 ~ 336042 (-)
il12ba NA coding downstream 262179 193931 ~ 196441 (-)
LOC120567100 LOC104949038,LOC103355705 coding upstream 352 460923 ~ 463027 (-)
lonrf1 lonrf1,LOC103354679 coding upstream 292951 753522 ~ 778323 (-)
med7 med7 coding upstream 319066 779637 ~ 781792 (-)
LOC120566654 NA coding upstream 1068840 1529411 ~ 1540492 (-)
eif4ebp3l eif4ebp3,LOC102306235 coding upstream 1085812 1546383 ~ 1550627 (-)
G102309 NA non-coding downstream 70375 383449 ~ 388245 (-)
LOC120567446 NA non-coding downstream 227164 230377 ~ 231456 (-)
LOC120567447 NA non-coding downstream 229181 227228 ~ 229439 (-)
G102273 NA non-coding downstream 248178 210129 ~ 210442 (-)
G102240 NA non-coding downstream 391607 65234 ~ 67013 (-)
G102341 NA non-coding upstream 27727 488298 ~ 488647 (-)
G102343 NA non-coding upstream 39897 500468 ~ 500682 (-)
G102345 NA non-coding upstream 98160 558731 ~ 559029 (-)
G102346 NA non-coding upstream 99290 559861 ~ 560236 (-)
G102349 NA non-coding upstream 114421 574992 ~ 575259 (-)
G102276 NA other downstream 227176 220592 ~ 231444 (-)
tmsb2 NA other upstream 5719 466290 ~ 468450 (-)
insb LOC101469513,LOC102789752 other upstream 378375 838946 ~ 841618 (-)
sh2d1aa sh2d1a,LOC102800107 other upstream 1716296 2176867 ~ 2197918 (-)
slc7a2 slc7a2,LOC102301583 other upstream 2264889 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 2430399 2890970 ~ 2898545 (-)

Expression


Co-expression Network