LOC120567100 (LOC104949038,LOC103355705)


Basic Information

Item Value
gene id LOC120567100
gene name LOC104949038,LOC103355705
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 460923 ~ 463027 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813915.1
ATGGGACCTTTGCATCTCCTCCCAGCCATGGTTCTTTCCATGTGCTGTCATGCTCACTTTGCATCAGCTTGGACGGTGAATAATTTCCTCATGACTGGACCTAAGGCTTTTCTGACCTATGCCGGTAGTGTGCAAGTGGGCGCACAGAGTGGAATATATGAGTGTAAACACCAGTTCGCGTGGGAGAGGTGGAACTGCCCAGAAAACACGCTCCAATTATCCACACACAACGGCCTTCGAAGTGCCACAAGAGAGACGGCTTTTGTCCATGCCATCAGCGCGGCCGGAGTGATGTACACGCTCACCAAGAACTGTAGTATGGGAGACTTTGACAACTGCGGCTGTGATGACTCCAGAATTGGACAGACAGGTGGTAGAGGGTGGATTTGGGGGGGCTGCAGTGATAATGTGGCGTTTGGAGAGAAGATCTCCAAACAGTTTGTGGACGCGCTGGAAGGTGGGCATGACTCGCGCGCATCAGTCAACCTACATAACAACGAGGCAGGCAGACTGgCAATCAAAGCTACCATGAGGAGAGCCTGTAAGTGTCACGGAGTGTCTGGGAGCTGCAGTATCCAGACCTGCTGGATGCAGCTTGCCGACTTCAGAGAGGTGGGCAACTACCTGAAAATGAAGCACGGGCATTCAAAGAAACTTGAGATGGACAAGAACCCGGTGAGGGCTGGGAACAGCGCGGACAACCGAGGAGCCATAGCGCAAGCTTTTCGAAGCATCGCTCGTACAGAGCTCGTTTACCTGGAGGATTCCCCGGATTACTGCGTCAAGAACCACAGCCTGGGATTGCAGGGCACCGAGGGGCGGGAGTGTCTGAAGGGTGACAAGAACATGTCCCAGTGGGAGAGAAAGAGCTGCCGCAGGCTGTGCTATGGATGCGGCCTCAGAGTGGTGGAGAAGCGCATTGAGGTTGTCAGCAGCTGCAACTGCAAATTCCACTGGTGCTGCACAGTGAAGTGTGACAAATGCACGAAAGTTGTTAATAAATATTACTGTGCGCGTAAAGGAGGTGAGAGAAAACCACAGAATAAAACAAAGCGCAGACACCATGCGCGCCGCCACTGACTGCCATTTTTTGCAGAGACTATCCTCACACttcatttatttcaacattatGGACATCAATAGGCATTATGATGTTTACAAGaatgttattttcattttcaactaTCACCTGAAGCTTTTTAATGCACTTGCTCGTATTAATTTGATTCTGTATATTA

Function

NR:

description
PREDICTED: protein Wnt-8a-like

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005102 signaling receptor binding molecular_function

KEGG:

id description
K00714 WNT8; wingless-type MMTV integration site family, member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813915.1 True 1238 mRNA 0.50 6 460923 463027

Neighbor

gene id symbol gene type direction distance location
LOC120567087 LOC103355704,LOC104949036 coding downstream 352 458620 ~ 460571 (-)
lcp2b NA coding downstream 4704 452088 ~ 456219 (-)
foxi3b foxi1,LOC103355701,LOC103470887,LOC105917079,LOC103132071,LOC106937269 coding downstream 12964 445633 ~ 447959 (-)
LOC120567031 LOC100705418,LOC101464828,LOC102297141 coding downstream 31068 423933 ~ 429855 (-)
sh3tc2 sh3tc2,LOC104962816 coding downstream 124881 311932 ~ 336042 (-)
lonrf1 lonrf1,LOC103354679 coding upstream 290495 753522 ~ 778323 (-)
med7 med7 coding upstream 316610 779637 ~ 781792 (-)
LOC120566654 NA coding upstream 1066384 1529411 ~ 1540492 (-)
eif4ebp3l eif4ebp3,LOC102306235 coding upstream 1083356 1546383 ~ 1550627 (-)
nxt2 nxt2 coding upstream 1111365 1574392 ~ 1576708 (-)
G102309 NA non-coding downstream 72678 383449 ~ 388245 (-)
LOC120567446 NA non-coding downstream 229467 230377 ~ 231456 (-)
LOC120567447 NA non-coding downstream 231484 227228 ~ 229439 (-)
G102273 NA non-coding downstream 250481 210129 ~ 210442 (-)
G102240 NA non-coding downstream 393910 65234 ~ 67013 (-)
G102341 NA non-coding upstream 25271 488298 ~ 488647 (-)
G102343 NA non-coding upstream 37441 500468 ~ 500682 (-)
G102345 NA non-coding upstream 95704 558731 ~ 559029 (-)
G102346 NA non-coding upstream 96834 559861 ~ 560236 (-)
G102349 NA non-coding upstream 111965 574992 ~ 575259 (-)
G102276 NA other downstream 229479 220592 ~ 231444 (-)
tmsb2 NA other upstream 3263 466290 ~ 468450 (-)
insb LOC101469513,LOC102789752 other upstream 375919 838946 ~ 841618 (-)
sh2d1aa sh2d1a,LOC102800107 other upstream 1713840 2176867 ~ 2197918 (-)
slc7a2 slc7a2,LOC102301583 other upstream 2262433 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 2427943 2890970 ~ 2898545 (-)

Expression


Co-expression Network