LOC120567109


Basic Information

Item Value
gene id LOC120567109
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 3155693 ~ 3157527 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813925.1
CGCTCGTCGCTCAGACTTGCTCAGCCCGACTCTAGTCACATACATGGAGAAGACACAGACCGAACGCTTGGAGGAGATACCGGAGCTTGACAAACAAGAGTCAGGATGGTCTATAGCGCGGCTCTGCTCTTAGGACCCGGACCCGGAGCGGCCGTGTGCTCGGACGAACACAGCGTCGTCGGAGAGATGATGGGGAAGTATTTCCTCCAGCTGCTCACCTCCCCGGGCCGAAAGACGAGCTCCGCCCGGCGGGGCAGCGTCGAGAGCTGCGACGAGAGCGATAGCTACTCGCCTTCTTTTTCCAACATGGACGCTGGTTTGGAGCACGTAgagcagctgctgcagcaggaTGTGACCCGGCGCATAGAGCGCTGTCTGACAGAGGCCAAAGCTTCCACCCTCCACTGccagatgctgctgctgcctcgcCAGATGTTGGCCAAGGTCGGCCAAGACGTGGTGCGCTCCTCTGCCGATGAACCCTGCGGGCTCCGGGGCGCCTCCATCACCATCCACGTGGATGGCAAAGATGGCCTGAAGTCCGTGGGCAGCATCTTCCTAGACCAAAGGGTCACCCCGACATTTGAACTGTCCGTGATCTTCAAGGCAGACAAGGACGACGGCTGGCCGCCGATCAAGCACATCTTCGATAGCAACAAAGTGTTGAAGTTGAGACCAGAGTACCGGCTGGTGAAGAGGAAGCTCTACTCCTCAGCCAGCCCTGTCGTTCATGATTTCAActagaggggggtgggggggcggtTAAGAATGTTAACTCCCCGTTTCACTGttcacctctgtgtgtgtgaaatgtcaGGCTACGTGCACATTTTTTGGTCTGGAAGGAACTACAAAATGCTGATTGTTCTTTATTCATGTATGAATGTCTAACGCAGGGACCTAACTGCTTGTTTTCTACACTCTGTGGCTGACATGACGTCAGTGGTTTGCACAGACTGGTTGAATGTTAAAGTGTTCACTGTAAACCAAAAAAAATTCCTTCCAGGATTGGGCAGGTCTACCTCCTGAAGTGTGCTGTACTGTTATTTATGCAATtgttaaatacattatttttttacacta

Function

GO:

id name namespace
GO:0009968 negative regulation of signal transduction biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813925.1 True 1083 mRNA 0.54 2 3155693 3157527

Neighbor

gene id symbol gene type direction distance location
phf6 phf6,LOC102789831 coding downstream 230920 2911615 ~ 2924773 (-)
hprt1 hprt1,LOC102225914,LOC107082363 coding downstream 246653 2899351 ~ 2909040 (-)
ints6l LOC103357573,LOC100710804,LOC102788097,LOC101475885 coding downstream 271598 2865839 ~ 2884095 (-)
pfdn6 pfdn6 coding downstream 296647 2854830 ~ 2859046 (-)
her11 NA coding downstream 310994 2843087 ~ 2844699 (-)
sting1 tmem173 coding upstream 6669 3164196 ~ 3178567 (-)
ppp3cb LOC100697276,LOC103357584,LOC102312674,LOC102792915,LOC103471056,LOC104920567 coding upstream 24035 3181562 ~ 3227009 (-)
zgc:92242 NA coding upstream 115935 3273462 ~ 3284779 (-)
purab pura,LOC101470750,LOC103149274,LOC104965787,LOC107380861,LOC103391294 coding upstream 201672 3359199 ~ 3365806 (-)
eif1ad eif1ad,LOC102796513 coding upstream 289250 3446777 ~ 3453639 (-)
G103096 LOC106586057 non-coding downstream 30356 3121679 ~ 3125337 (-)
G103067 NA non-coding downstream 194307 2960371 ~ 2961386 (-)
G103059 NA non-coding downstream 214896 2939146 ~ 2940797 (-)
G102941 NA non-coding downstream 364869 2790526 ~ 2790824 (-)
G102923 mtus1 non-coding downstream 444254 2709027 ~ 2711439 (-)
G103085 NA non-coding upstream 10125 3167652 ~ 3246583 (-)
G103139 NA non-coding upstream 195053 3352580 ~ 3353392 (-)
G103160 NA non-coding upstream 351466 3508993 ~ 3510142 (-)
G103162 NA non-coding upstream 353812 3511339 ~ 3513110 (-)
G103177 NA non-coding upstream 473390 3630917 ~ 3631265 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other downstream 257148 2890970 ~ 2898545 (-)
LOC120567496 NA other downstream 259380 2896171 ~ 2896313 (-)
slc7a2 slc7a2,LOC102301583 other downstream 415206 2725460 ~ 2740487 (-)
sh2d1aa sh2d1a,LOC102800107 other downstream 957775 2176867 ~ 2197918 (-)
insb LOC101469513,LOC102789752 other downstream 2314075 838946 ~ 841618 (-)
guf1 guf1,LOC102797887 other upstream 466632 3624159 ~ 3642640 (-)
G103268 NA other upstream 745464 3902991 ~ 3925309 (-)
smim19 smim19 other upstream 771403 3928930 ~ 3933220 (-)
LOC120567378 NA other upstream 1163122 4320649 ~ 4400058 (-)
fmr1 fmr1,LOC102779310 other upstream 1268990 4426517 ~ 4457827 (-)

Expression


Co-expression Network