sting1 (tmem173)


Basic Information

Item Value
gene id sting1
gene name tmem173
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 3164196 ~ 3178567 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813926.1
CAGAGGACAAAGGAAATCTCTCTATTTTGGATCACAGCAACACCAAGATGCAGTCCCTCAAAGATCACGATACTCTCATTCCTCGGCCTCGTGGGACTTTGCCTAAGGTGTGTGCTGCGGCACTGGCTGCCGTGACAATAGGAGGCACAGTGGTTCTGTCTCCTGAAAGGTTATTTGGATGGGTTGCCATGGTAATACTCATCCTGACCCTTGGACCTCTGCTGCACGGCCTATGTCTTCTCGCAGAGGAGATGATTTACCATTCAAATACGAGGTATCGAGGCAGAGGACTGCTGAGCCATGTGCTGCCAGCCTGTGGGTTGGGGGGAAAGACCCTGCTGGCTGCGGGTCTGGCAGGCATTCTGCTCTACCTGGCCGGACATCCTCTGCCACACAAAGGCCAATGCTGGAAACTCCTCTTCCTGGCCTCGGTCCTTTACGCGCTGTTCAAAAGCCTGGGAGTCTTGGGTCCGTCGGAGGTGGAGGTGTCAGACATCTGCGAGGGGAGGAAGATGAACGTGGCCCACGGCCTGGCCTGGTCCTTCTACCTTGGCTACCTGCGACTGGTGCTGCCGCGTTTGGAGGGCTCCATCGCAGCATTTCGTGCCACCCATCAGGCCAGCAGCTCCTCCTGGGGTCGTGGCTCCAGGAAACTCCTCATCCTTGTACCTCTCAATGCCAACATTTCTCACAAgctggaggaagaggatgacAACATCTGTTTCTATGACAACCTCCCCAACAGTGAGATAGACAGGGCAGGAGTCCGGGGGCGGGTCTACAAACACAGCGTCTACAGTGTATTGGACGAGCATGGAAAGGCCCATGAGTGTGTGGTGGAGTATGCGACGCCTCTGCTGACGCTGTACAGCATGTCCCAGGAGAGCAGCGCTGGTTTCGGGGAGCCGGAGCGCAGACAGCAGGTCCTGCTCTTCTACAGGACGCTGCAGGACATACTGGAGCACTCGCTGGAGTGCCGCAACCGCTACAAACTCATCCTGCTTAATGATGAGCATGAGGACGACCCTCACTTCCTGTCCAAAGCTATCCTACGccacctgcagcagcaggagaaAGAGGAGTTCTGCCTCACCCCGCCTCCTCACCAGGAGATGGCGCACCCGTTGGCGAATGGTGACTGGCACCACCCTGAGCAAATGAGCAGGGAGCCTACGCTCATGTTCAGCCTGGAGAAACCTCAGCCTCTGAGGGACCCTGTCGAGAACACTTATCAATGAACAATTGTTAGGGACATTATGATACATACTTCCCCTCTTGTTATTATTGAACTGTTTGCATAGAATAATATTATTATGAATGTGTTAACCAAGATAACATGGGAGCCATTGCGTGTCCTTGTCTGAGCACGGTGTGTTCCTGAGGGCATACGTGCCCTCCCAGACCAGATAGGGGAGACGTCATCGACTCTGACAAGATAACAATTTACGACATCTTCTCTGTATCAcgatttattacatttattataaaAAGCAGCTGTAGAGAGCTTTTCGTTAGGTCATTGTCTGTACTGTTTTGTAGTGCGGAGAAGGCCTCCTTGTTGGGTTCTCAAGTAAAAATGAACTTTGATATAT

Function

symbol description
tmem173 transmembrane protein 173

NR:

description
PREDICTED: stimulator of interferon genes protein

GO: NA

KEGG:

id description
K12654 TMEM173, MITA; transmembrane protein 173

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813926.1 True 1592 mRNA 0.53 7 3164196 3178567

Neighbor

gene id symbol gene type direction distance location
LOC120567109 NA coding downstream 6669 3155693 ~ 3157527 (-)
phf6 phf6,LOC102789831 coding downstream 239423 2911615 ~ 2924773 (-)
hprt1 hprt1,LOC102225914,LOC107082363 coding downstream 255156 2899351 ~ 2909040 (-)
ints6l LOC103357573,LOC100710804,LOC102788097,LOC101475885 coding downstream 280101 2865839 ~ 2884095 (-)
pfdn6 pfdn6 coding downstream 305150 2854830 ~ 2859046 (-)
ppp3cb LOC100697276,LOC103357584,LOC102312674,LOC102792915,LOC103471056,LOC104920567 coding upstream 2995 3181562 ~ 3227009 (-)
zgc:92242 NA coding upstream 94895 3273462 ~ 3284779 (-)
purab pura,LOC101470750,LOC103149274,LOC104965787,LOC107380861,LOC103391294 coding upstream 180632 3359199 ~ 3365806 (-)
eif1ad eif1ad,LOC102796513 coding upstream 268210 3446777 ~ 3453639 (-)
ctsf ctsw coding upstream 279405 3457972 ~ 3466161 (-)
G103096 LOC106586057 non-coding downstream 38859 3121679 ~ 3125337 (-)
G103067 NA non-coding downstream 202810 2960371 ~ 2961386 (-)
G103059 NA non-coding downstream 223399 2939146 ~ 2940797 (-)
G102941 NA non-coding downstream 373372 2790526 ~ 2790824 (-)
G102923 mtus1 non-coding downstream 452757 2709027 ~ 2711439 (-)
G103139 NA non-coding upstream 174013 3352580 ~ 3353392 (-)
G103160 NA non-coding upstream 330426 3508993 ~ 3510142 (-)
G103162 NA non-coding upstream 332772 3511339 ~ 3513110 (-)
G103177 NA non-coding upstream 452350 3630917 ~ 3631265 (-)
LOC120566784 NA non-coding upstream 499276 3677843 ~ 3678766 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other downstream 265651 2890970 ~ 2898545 (-)
LOC120567496 NA other downstream 267883 2896171 ~ 2896313 (-)
slc7a2 slc7a2,LOC102301583 other downstream 423709 2725460 ~ 2740487 (-)
sh2d1aa sh2d1a,LOC102800107 other downstream 966278 2176867 ~ 2197918 (-)
insb LOC101469513,LOC102789752 other downstream 2322578 838946 ~ 841618 (-)
guf1 guf1,LOC102797887 other upstream 445592 3624159 ~ 3642640 (-)
G103268 NA other upstream 724424 3902991 ~ 3925309 (-)
smim19 smim19 other upstream 750363 3928930 ~ 3933220 (-)
LOC120567378 NA other upstream 1142082 4320649 ~ 4400058 (-)
fmr1 fmr1,LOC102779310 other upstream 1247950 4426517 ~ 4457827 (-)

Expression


Co-expression Network