sytl4


Basic Information

Item Value
gene id sytl4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24928701 ~ 24942371 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813946.1
GTCATGGAAAATGTGGAGAGGCGCTCCTGCCTGTCTGCTGCTTGCAAACTTTCCTTATCTTCCGGTAGTGTCGGGACTCCTCTAGCGCACAAAGTCAACTGTTTTTGGACACGGGAggcaagaagaagaagttggAAAGGCAGGGATATAGCCGACAAGCAAAGAATATCTCGCTGTCGCCCGTAGCGACGCAAGCCGTGTAGCGGTGGTACAGTCGACTTTTAACAACAGGAGATCTTCTAGATGCAACAGCGACTGAGCTGAACCTGTTAACCTGCGCGAAGGGTTCATGGTTCAAGGCACAATGCCCCAGGCTGCTGACATGATCAACCTGGGCTTCCTGTCTGACTCTGAGCGGGAGCTGATACTGGAGGTGCTGCAACGGGACAGGGAGTTGAGACAGGCTGAGGAGCAGCGTGTGCGGAGTTTGAAGACAGAGTTGTTGGATGTGAAGAGGAAGGGGGCCAAACGTGGCAGTGGAAGATACAGTCAGCGTAGTTGTGGCAGATGCCAGGAGCCTCTGAGTCGACTGACAGTGTTCTCAAGCCAGTGTAAGATTTGCAATCACCATGTGTGCAACAACTGCCGAACAGTCCTCTCCAAAGGATCATGGCTGTGCACCGTGTGTGCCAAAGAGTTGGATCTAAAGAAAAGGACAGGTGACTGGTTCTACGATCAAAGGGTCAACCGGTTCTCCACGACGCCTGGACACGACCTAGTGAGAGTCTCTCTGAAAAAGAAACCTCAGACAAAGAAGCGTGAGACAACAGGAGAACTGCTGTTGAGAAGTACTGAAATAAACCCTGATCTTCCCACTCCTGTGCCGCGAGTCAGGCAGAAAAATCCGATAACAGATGAAGGTCATTCAAACGAGAATTCAGGATCAATTGCTTCAAAGGCGGAAGTTTGGTCAAAACCAACACATAGTGACACAGAGTCTGCAGAAAACAACAGTAAAAGTAGCAGTAAAACAGACACTCAGTCTGGTCATGTGACCCCTGAGCAACAAAGgagagagaacCGCTCAGTTCAGTCCAGCCCAGCAGGGTCCACTGTTTCCAGTCTAACCGCTCCAGTCAAAGCAGATATCGTTAGCGTTGACGGTGCCAACTTGGAAGTTGTACGAACTGCAGCCGATGTACAACTGGTCAGTCCGACCCCGGAGATAGATGTTGATAGACTCTTTAAGAAGAGCGTCAAACGATCGCTAAACCCTCCTGAGTGTGTATCGACACTGGACCTGCGTGATGGACGTGACACATCAAAGGCCTCACTGGTCAACAGGAGCCATTCTGTACCAGGCCTTGACATACAGGAagatggagaggaagaggaagatatTGACAGCTTGGTTAGCTTTCATAAAAAGACAATGGCTTCGATCCCCTACAGCCTGAATAGCTCAAGGAGCACACTGGGCAGCATGATGAGTATTTATAGTGAGGCAGGAGACTTTAGCAGTGTGGAGGTGAGCGGAGACCTCATCTTCTCTATGAGCTACGACGAACACACCCAAAACCTCCACGTCTTCATCAAGGAGTGCCTTGGGCTGGCCTACGGCGATGCCTCACGGCACCTTTCCCACCCttACGTCAAATGTTATCTGCTCCCTGACAAATCTCGCCAGAGCAAAAGGAAGACCAGCATCAAGAGAAACACGGTCAACCCCGTCTACAAAGAAACACTGAAGTACTCTATCAGCCGCTCTCAGCTGTTCACCCGCTCCATGTTGATATCAGTCTGGCATCATGGTCGCTTCAGCCGCAACGCTTTCCTTGGAGAGGTGGAGATCCCTCTGGACACCCGAGACCTCGACTCCCCGTACGAGGACCGCGTGGCTCTCATGGCGAAGTCAGCACCTGCTGTGTCATCTACAGCTTTTGCTCAGTACAAAGGAGAGTTGGTGATCTCCTTGAAGTATGTCTCCCCTAAAAAGCCAACATCTGAGAAAACCAAAGGCAAAAAGTCGGTGATTGAGAGAGGAGAACTGCAGGTCCTAATTAAAGAGGCAAAGAATTTGATGGCAATGAAACCAGGAGACACCTCAGATAGCTTCGTTAAAGGGTACTTGTTCCCGACTAAGACCAAGACCACAAAGAGGAAGACTCCAGTTGTGAAGAAGAACCTGAACCCCCACTACGACCACACATTTGTGTACAAGGAGCTGGCTTTGGAGCAGCTGGAGGAGATGTGTCTGGAGCTGACCGTTTGGGACAGAGAAGCCATGCTGAGCAACGAGTTCCTGGGAGGAGTCCGTCTCAGCTCCGGAGAAGGCACTGTAAAAATAGGAAAAGAGGAAGTGGAAATGGACTCAGTTGGAGAGGAAGTCAGTCTTTGGAAGAAGATGATGCAGTACCCCGACTCATGGGCAGAGGGCACTCTTCCACTGCGCTCCACTATGGTGAAGGGCAAATGAGGACGGCACACAGGGCTCAACCCTCGAAAAGAATACAGAGACTGAAATGGGGAGACGATGTGGGGTCTGAGACAAATAGGAGATTGTGGATTAATTTTCTTCGCAAGTTTGTCAGACCAGAAGCGTGTCTACTGCTGACTGGCTGTAAGCAGATAAAGTAGGCCTGCTAAACACCAAACATCTGCTCACACTGAAAATGTGCCAAAACATCACAACGATAAACCCTGGATAGATTTTAAAAGCATTGACACagtcattttatgtttttaaattcagGCTGTATATATTATTGCAATTCAAATTCATGCACAACACTGATGCACTCATGCACAGAAAGAGTTGTaatgtgtcacttttttcttcaTAATTGTGTACAGAATTACACTGATGCTTGGGAAAACAAGTCATTATAAACTGGTAGTTGCATCCAACAAATTGTAATACTATCGTgtacaaattatatttatatgtgtTGCATGAAAAGCTTACtagaaattattaaatttgtCTAGTTACAGCTATAAATGTAGATTTAAATTTTTAACTGTGTGATCAGAGGCGTGTTTACCTCAAGGTTTCCATGAATATTCTGTTcacccaataaaaaaaaaatgtacttaaactCAAA
>XM_039813947.1
GTCATGGAAAATGTGGAGAGGCGCTCCTGCCTGTCTGCTGCTTGCAAACTTTCCTTATCTTCCGGTAGTGTCGGGACTCCTCTAGCGCACAAAGTCAACTGTTTTTGGACACGGGAggcaagaagaagaagttggAAAGGCAGGGATATAGCCGACAAGCAAAGAATATCTCGCTGTCGCCCGTAGCGACGCAAGCCGTGTAGCGGTGGTACAGTCGACTTTTAACAACAGGAGATCTTCTAGATGCAACAGCGACTGAGCTGAACCTGTTAACCTGCGCGAAGGGTTCATGGTTCAAGGCACAATGCCCCAGGCTGCTGACATGATCAACCTGGGCTTCCTGTCTGACTCTGAGCGGGAGCTGATACTGGAGGTGCTGCAACGGGACAGGGAGTTGAGACAGGCTGAGGAGCAGCGTGTGCGGAGTTTGAAGACAGAGTTGTTGGATGTGAAGAGGAAGGGGGCCAAACGTGGCAGTGGAAGATACAGTCAGCGTAGTTGTGGCAGATGCCAGGAGCCTCTGAGTCGACTGACAGTGTTCTCAAGCCAGTGTAAGATTTGCAATCACCATGTGTGCAACAACTGCCGAACAGTCCTCTCCAAAGGATCATGGCTGTGCACCGTGTGTGCCAAAGAGTTGGATCTAAAGAAAAGGACAGGTGACTGGTTCTACGATCAAAGGGTCAACCGGTTCTCCACGACGCCTGGACACGACCTAGTGAGAGTCTCTCTGAAAAAGAAACCTCAGACAAAGAAGCGTGAGACAACAGGAGAACTGCTGTTGAGAAGTACTGAAATAAACCCTGATCTTCCCACTCCTGTGCCGCGAGTCAGGCAGAAAAATCCGATAACAGATGAAGGgagagagaacCGCTCAGTTCAGTCCAGCCCAGCAGGGTCCACTGTTTCCAGTCTAACCGCTCCAGTCAAAGCAGATATCGTTAGCGTTGACGGTGCCAACTTGGAAGTTGTACGAACTGCAGCCGATGTACAACTGGTCAGTCCGACCCCGGAGATAGATGTTGATAGACTCTTTAAGAAGAGCGTCAAACGATCGCTAAACCCTCCTGAGTGTGTATCGACACTGGACCTGCGTGATGGACGTGACACATCAAAGGCCTCACTGGTCAACAGGAGCCATTCTGTACCAGGCCTTGACATACAGGAagatggagaggaagaggaagatatTGACAGCTTGGTTAGCTTTCATAAAAAGACAATGGCTTCGATCCCCTACAGCCTGAATAGCTCAAGGAGCACACTGGGCAGCATGATGAGTATTTATAGTGAGGCAGGAGACTTTAGCAGTGTGGAGGTGAGCGGAGACCTCATCTTCTCTATGAGCTACGACGAACACACCCAAAACCTCCACGTCTTCATCAAGGAGTGCCTTGGGCTGGCCTACGGCGATGCCTCACGGCACCTTTCCCACCCttACGTCAAATGTTATCTGCTCCCTGACAAATCTCGCCAGAGCAAAAGGAAGACCAGCATCAAGAGAAACACGGTCAACCCCGTCTACAAAGAAACACTGAAGTACTCTATCAGCCGCTCTCAGCTGTTCACCCGCTCCATGTTGATATCAGTCTGGCATCATGGTCGCTTCAGCCGCAACGCTTTCCTTGGAGAGGTGGAGATCCCTCTGGACACCCGAGACCTCGACTCCCCGTACGAGGACCGCGTGGCTCTCATGGCGAAGTCAGCACCTGCTGTGTCATCTACAGCTTTTGCTCAGTACAAAGGAGAGTTGGTGATCTCCTTGAAGTATGTCTCCCCTAAAAAGCCAACATCTGAGAAAACCAAAGGCAAAAAGTCGGTGATTGAGAGAGGAGAACTGCAGGTCCTAATTAAAGAGGCAAAGAATTTGATGGCAATGAAACCAGGAGACACCTCAGATAGCTTCGTTAAAGGGTACTTGTTCCCGACTAAGACCAAGACCACAAAGAGGAAGACTCCAGTTGTGAAGAAGAACCTGAACCCCCACTACGACCACACATTTGTGTACAAGGAGCTGGCTTTGGAGCAGCTGGAGGAGATGTGTCTGGAGCTGACCGTTTGGGACAGAGAAGCCATGCTGAGCAACGAGTTCCTGGGAGGAGTCCGTCTCAGCTCCGGAGAAGGCACTGTAAAAATAGGAAAAGAGGAAGTGGAAATGGACTCAGTTGGAGAGGAAGTCAGTCTTTGGAAGAAGATGATGCAGTACCCCGACTCATGGGCAGAGGGCACTCTTCCACTGCGCTCCACTATGGTGAAGGGCAAATGAGGACGGCACACAGGGCTCAACCCTCGAAAAGAATACAGAGACTGAAATGGGGAGACGATGTGGGGTCTGAGACAAATAGGAGATTGTGGATTAATTTTCTTCGCAAGTTTGTCAGACCAGAAGCGTGTCTACTGCTGACTGGCTGTAAGCAGATAAAGTAGGCCTGCTAAACACCAAACATCTGCTCACACTGAAAATGTGCCAAAACATCACAACGATAAACCCTGGATAGATTTTAAAAGCATTGACACagtcattttatgtttttaaattcagGCTGTATATATTATTGCAATTCAAATTCATGCACAACACTGATGCACTCATGCACAGAAAGAGTTGTaatgtgtcacttttttcttcaTAATTGTGTACAGAATTACACTGATGCTTGGGAAAACAAGTCATTATAAACTGGTAGTTGCATCCAACAAATTGTAATACTATCGTgtacaaattatatttatatgtgtTGCATGAAAAGCTTACtagaaattattaaatttgtCTAGTTACAGCTATAAATGTAGATTTAAATTTTTAACTGTGTGATCAGAGGCGTGTTTACCTCAAGGTTTCCATGAATATTCTGTTcacccaataaaaaaaaaatgtacttaaactCAAA

Function

NR:

description
synaptotagmin-like protein 4 isoform X3

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process

KEGG:

id description
K17598 SYTL; synaptotagmin-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813946.1 True 3044 mRNA 0.47 18 24928701 24942371
XM_039813947.1 False 2894 mRNA 0.48 17 24928701 24942371

Neighbor

gene id symbol gene type direction distance location
tspan7 tspan6,LOC104955938,LOC107378166 coding downstream 9950 24912563 ~ 24918751 (-)
mid1ip1l mid1ip1,LOC104928730,LOC103352948 coding downstream 17282 24908896 ~ 24911419 (-)
cstf2 cstf2 coding downstream 69329 24846892 ~ 24859372 (-)
arl13a arl13a,LOC102776915,LOC103352893 coding downstream 108208 24815085 ~ 24820493 (-)
tmem35 tmem35a coding downstream 118768 24807285 ~ 24809933 (-)
trmt12 trmt12,LOC106611794 coding upstream 1077 24943448 ~ 24948186 (-)
sash3 sash3 coding upstream 41122 24983493 ~ 24993304 (-)
xpnpep2 xpnpep2 coding upstream 58384 25000755 ~ 25013890 (-)
vimr2 NA coding upstream 187775 25130146 ~ 25147858 (-)
ocrl ocrl coding upstream 205575 25147946 ~ 25165755 (-)
G107890 NA non-coding downstream 37985 24890301 ~ 24890716 (-)
G107889 NA non-coding downstream 43274 24885009 ~ 24885427 (-)
G107888 bcorl1 non-coding downstream 44445 24884000 ~ 24884256 (-)
G107887 NA non-coding downstream 44944 24883130 ~ 24883757 (-)
G107885 LOC104956976 non-coding downstream 46831 24876822 ~ 24881870 (-)
G107903 NA non-coding upstream 34753 24977124 ~ 24980797 (-)
G107907 NA non-coding upstream 130810 25073181 ~ 25073832 (-)
G107923 NA non-coding upstream 238567 25180938 ~ 25186478 (-)
G107992 sept6 non-coding upstream 349246 25291617 ~ 25297266 (-)
G108031 NA non-coding upstream 706163 25648534 ~ 25648780 (-)
trnav-uac_15 NA other downstream 66517 24861970 ~ 24862184 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other downstream 349602 24573441 ~ 24579099 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 939800 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 1741643 23184192 ~ 23187058 (-)
G107284 LOC103374305,LOC102779018 other downstream 1793916 23129709 ~ 23134785 (-)
ndufa1 NA other upstream 320801 25263172 ~ 25264864 (-)
G107989 NA other upstream 337232 25279603 ~ 25288086 (-)
diaph2 NA other upstream 894959 25837330 ~ 26258199 (-)
rpl36a LOC106604455,LOC100304549,LOC100219516 other upstream 1515624 26457995 ~ 26460732 (-)
G108181 LOC103390578 other upstream 2046893 26989264 ~ 27001011 (-)

Expression


Co-expression Network