hprt1 (hprt1,LOC102225914,LOC107082363)


Basic Information

Item Value
gene id hprt1
gene name hprt1,LOC102225914,LOC107082363
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 2899351 ~ 2909040 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039813961.1
ACCGACACGGATATGGCGACATCCAGCCCCTGTGTTGTGATCAGTGATGAGGAGCAGGGGTATGACCTGGACCTTTTCTGCATACCAAAGCACTACGCCGATGACCTGGAGAGGGTCTACATCCCACATGGACTCATCTTGGACAGGACGGAGAGGCTTGCCAGAGAGATCATGAAGGAAATGGGGGGGCACCACATTGTGGCCCTCTGTGTGCTCAAAGGGGGTTACAAGTTCTTTGCAGACCTGCTGGACTACATCAAGGCGCTGAACAGGAACAGTGACCGCTCCATCCCAATGACAGTGGACTTCATTCGCCTCAAAAGCTACtgtAACGACCAGTCGACAGGTGAAATCAAAGTCATCGGTGGAGATGACCTGTCTACATTGACGGGCAAGAATGTCCTGATTGTGGAGGATATCATCGACACGGGGAAGACAATGCAGACATTATTGCAACTCCTCCAACAGTACAACCCCAAAATGGTTAAGGTAGCAAGTTTGTTGGTGAAGAGAACGCCAAGAAGTGTTGGCTACCGACCAGACTTTGTAGGATTCGAGGTGCCTGACAAATTTGTGGTGGGATACGCACTAGACTACAACGAGTACTTTAGAGATCTAAATCATATCTGCGTCATTAGTGAAACGGGGAAGGAGAAGTACAAGGCATGAAGAGCACACCAAAACACTTTGATGTATGGTTATACCGTCTCCTTTTGCTGTCCTTttgaattttatattttattacttCATATTCGTGTCATAAAAATACTCAGCCTGCTCAGGGTCCCTGACACTGTTGGAGTGATAATCTTGACCATTGCATTGCCTGTTTtatccacaacacacacaacttttGAGAAAATTGATTGCCTTAGCTAGTAACTCATCTGGGTTAAGCAGCATGGAGCCCGGCTTCACCTGGAATCTTTATTAGTATAATGCTtctatgcccccccccccacactaattattttttttaagcaatgCTGCTAGCTTTAAGTACAATATCACAATTGTGCAACATTAAGATTTACAACATTTGGCAACCtccaatgaaatgaaataattattttattgtaattcTACTTTTACCTTAAGGATGACATTGCATTTTCTTGAAATCTACAGTGTATGTAAATTTTGGGACAAAACACATGTTTGTTGCTGAGGCGTGTGTGATAAGATGTTTTTCACATAGATTGTGTAGAAAAGTAACACAAATGTTGACTTCTGTCCCTAATTGAACACATAGATTTGCTGAAGATAAAATATCCTCTTATTTATGAGTGTTAATGAAATTTTATGTTACACAAAGAAATTGGATGCATGGGTGCTTTGTTCAGACAGATATCTTACTTATGCTGGAAAATATGTATAGGTTACAGATGTGTAAATGTTCACTTGATACTTATACTGAAGGTAATAAGTTATTCAATCCTGATTGAACTACTTTGTCTGTATTTACCGGTCATTGAGTCAGACAtgatttattttggtttttCAATTTCAACCTTATAAAATGCTCTGACTCACTGTAAACCAGTGTCAACTAAACTTTGCAATACCAGCAATTAAATGTTCACACCCCT

Function

symbol description
hprt1 Predicted to enable hypoxanthine phosphoribosyltransferase activity and magnesium ion binding activity. Predicted to be involved in hypoxanthine metabolic process and purine-containing compound salvage. Predicted to act upstream of or within purine ribonucleoside salvage. Predicted to be located in cytoplasm. Is expressed in several structures, including digestive system; immature eye; midbrain; musculature system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in HRPT-related hyperuricemia and Lesch-Nyhan syndrome. Orthologous to human HPRT1 (hypoxanthine phosphoribosyltransferase 1).

NR:

description
hypoxanthine-guanine phosphoribosyltransferase

GO:

id name namespace
GO:0006166 purine ribonucleoside salvage biological_process
GO:0005737 cytoplasm cellular_component
GO:0004422 hypoxanthine phosphoribosyltransferase activity molecular_function

KEGG:

id description
K00760 hprT, hpt, HPRT1; hypoxanthine phosphoribosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039813961.1 True 1589 mRNA 0.41 9 2899351 2909040

Neighbor

gene id symbol gene type direction distance location
ints6l LOC103357573,LOC100710804,LOC102788097,LOC101475885 coding downstream 15256 2865839 ~ 2884095 (-)
pfdn6 pfdn6 coding downstream 40305 2854830 ~ 2859046 (-)
her11 NA coding downstream 54652 2843087 ~ 2844699 (-)
micu3b micu3,LOC104941480,LOC104920617 coding downstream 83149 2796249 ~ 2816202 (-)
zdhhc2 zdhhc2 coding downstream 105678 2775405 ~ 2793673 (-)
phf6 phf6,LOC102789831 coding upstream 2575 2911615 ~ 2924773 (-)
LOC120567109 NA coding upstream 246653 3155693 ~ 3157527 (-)
sting1 tmem173 coding upstream 255156 3164196 ~ 3178567 (-)
ppp3cb LOC100697276,LOC103357584,LOC102312674,LOC102792915,LOC103471056,LOC104920567 coding upstream 272522 3181562 ~ 3227009 (-)
zgc:92242 NA coding upstream 364422 3273462 ~ 3284779 (-)
G102941 NA non-coding downstream 108527 2790526 ~ 2790824 (-)
G102923 mtus1 non-coding downstream 187912 2709027 ~ 2711439 (-)
G102916 NA non-coding downstream 204737 2694352 ~ 2694614 (-)
G102915 NA non-coding downstream 205796 2690831 ~ 2693555 (-)
G102914 NA non-coding downstream 208788 2688009 ~ 2690563 (-)
G103059 NA non-coding upstream 30106 2939146 ~ 2940797 (-)
G103067 NA non-coding upstream 51331 2960371 ~ 2961386 (-)
G103096 LOC106586057 non-coding upstream 212639 3121679 ~ 3125337 (-)
G103097 NA non-coding upstream 223111 3132151 ~ 3191381 (-)
G103085 NA non-coding upstream 258612 3167652 ~ 3246583 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other downstream 806 2890970 ~ 2898545 (-)
LOC120567496 NA other downstream 3038 2896171 ~ 2896313 (-)
slc7a2 slc7a2,LOC102301583 other downstream 158864 2725460 ~ 2740487 (-)
sh2d1aa sh2d1a,LOC102800107 other downstream 701433 2176867 ~ 2197918 (-)
insb LOC101469513,LOC102789752 other downstream 2057733 838946 ~ 841618 (-)
guf1 guf1,LOC102797887 other upstream 715119 3624159 ~ 3642640 (-)
G103268 NA other upstream 993951 3902991 ~ 3925309 (-)
smim19 smim19 other upstream 1019890 3928930 ~ 3933220 (-)
LOC120567378 NA other upstream 1411609 4320649 ~ 4400058 (-)
fmr1 fmr1,LOC102779310 other upstream 1517477 4426517 ~ 4457827 (-)

Expression


Co-expression Network