si:dkey-34l15.1 (LOC104919989,LOC104960541)


Basic Information

Item Value
gene id si:dkey-34l15.1
gene name LOC104919989,LOC104960541
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22754641 ~ 22762526 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814018.1
ACTCTCGGCGTCTAAGCCAATGCCTTGTCACTAAACCTGAGGAAGAAggatgtatttgtttttaacgATCATACCATATATCTAAGCGATCATACAAGCAGGATGGAGAGCTCAGTCACCAAGGAGATCTCCTATGAGGATCTAAAAGCTCTTCTGGGAAAGAGCCAAAATCTCTTTCTGGTTGACGTTCGCACTAAAGAGGAAGTGGATAAAGGACATATTCCAGGATCCGTTCACATCCCACTTGATACAGTAGCAGATGCTTTTGCAATGGTGCCAGAAGAATTCAAGGCCAAGTACGGAGTAACCAAGCCACCATTGGACGCGCCAGAGCTGGTGTTTCACTGCCATTTGGGCAGGCGAGGGGCAGTTGCCACAGGAAAAGCCTACGAACTTGGATATGTGAATGCACGTAATTATGCTGGAGCATACAAAGAGTGGTCTGCGAAGGAGGGAAAGTGATTTGTTTTGAAGGAAAGcctcatatatatttatacaaatAGTAATTGTGAAATCAAACAAAATATTTgtatgctgctttgttttcatACTCTACAACATAGTATGAAtagatacaaataaaataaattgttatCTACTCAGA
>XM_039814019.1
GATCATACAAGCAGGATGGAGAGCTCAGTCACCAAGGAGATCTCCTATGAGGATCTAAAAGCTCTTCTGGGAAAGAGCCAAAATCTCTTTCTGGTTGACGTTCGCACTAAAGAGGAAGTGGATAAAGGACATATTCCAGGATCCGTTCACATCCCACTTGATACAGTAGCAGATGCTTTTGCAATGGTGCCAGAAGAATTCAAGGCCAAGTACGGAGTAACCAAGCCACCATTGGACGCGCCAGAGCTGGTGTTTCACTGCCATTTGGGCAGGCGAGGGGCAGTTGCCACAGGAAAAGCCTACGAACTTGGATATGTGAATGCACGTAATTATGCTGGAGCATACAAAGAGTGGTCTGCGAAGGAGGGAAAGTGATTTGTTTTGAAGGAAAGcctcatatatatttatacaaatAGTAATTGTGAAATCAAACAAAATATTTgtatgctgctttgttttcatACTCTACAACATAGTATGAAtagatacaaataaaataaattgttatCTACTCAGA

Function

NR:

description
thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1

GO: NA

KEGG:

id description
K01013 TSTD1; thiosulfate:glutathione sulfurtransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814018.1 True 604 mRNA 0.41 4 22760159 22762526
XM_039814019.1 False 517 mRNA 0.42 4 22754641 22762526

Neighbor

gene id symbol gene type direction distance location
LOC120567158 NA coding upstream 648 22743607 ~ 22753993 (+)
f8 LOC104960537 coding upstream 49620 22685286 ~ 22705021 (+)
zgc:152774 NA coding upstream 70469 22664890 ~ 22684172 (+)
pmt LOC106930518,LOC102210468 coding upstream 94391 22650018 ~ 22660250 (+)
mid2 mid2,LOC101473971,LOC102306025 coding upstream 151370 22435278 ~ 22603271 (+)
pola2 pola2 coding downstream 8044 22770570 ~ 22778164 (+)
zdhhc24 zdhhc24 coding downstream 22084 22784610 ~ 22788719 (+)
LOC120567166 NA coding downstream 27088 22789614 ~ 22794208 (+)
LOC120567165 LOC100699826,LOC104947027,LOC103356244 coding downstream 32159 22794685 ~ 22805823 (+)
LOC120567435 NA coding downstream 52616 22815142 ~ 22823030 (+)
LOC120567160 NA non-coding upstream 28988 22723025 ~ 22725653 (+)
G107073 NA non-coding upstream 123271 22631079 ~ 22631370 (+)
G107050 NA non-coding upstream 339306 22415002 ~ 22415335 (+)
LOC120566464 NA non-coding upstream 357590 22390353 ~ 22397051 (+)
G107025 LOC104954424,LOC103390732 non-coding upstream 376301 22331012 ~ 22378340 (+)
G107149 NA non-coding downstream 61075 22823601 ~ 22823862 (+)
G107161 NA non-coding downstream 94129 22856655 ~ 22856868 (+)
G107164 NA non-coding downstream 103442 22865968 ~ 22866201 (+)
LOC120566955 NA non-coding downstream 104553 22867079 ~ 22875098 (+)
G107170 LOC103356238,LOC104934092,LOC105928696,LOC104942686,LOC106516021 non-coding downstream 121551 22884077 ~ 22887891 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other upstream 1285814 21448800 ~ 21468827 (+)
zdhhc5b zdhhc5 other upstream 1403663 21289531 ~ 21350978 (+)
selenoh selenoh other upstream 1471412 21279687 ~ 21283229 (+)
hrh2a LOC103354784,LOC104948895 other upstream 1807226 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 2402474 20351721 ~ 20352167 (+)
G107163 LOC103356264 other downstream 99664 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 141229 22903755 ~ 22909562 (+)
rom1b rom1,LOC102779683 other downstream 188069 22950595 ~ 22997038 (+)
G107168 NA other downstream 192446 22954972 ~ 22973761 (+)
flrt1b LOC103374305,LOC102200053 other downstream 337499 23100025 ~ 23132685 (+)

Expression


Co-expression Network