LOC120567161


Basic Information

Item Value
gene id LOC120567161
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22778405 ~ 22783217 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814020.1
TCTCTGCATCCACTGAACGCCTGCAGTCATGGCTGCATCAAGGGAGAATTTACTGTCTCTCGGACATCTGACAGGCACAGAAAGAAACACTTTCACAAAACAAAGAGAGCAGAGTCTAAAAAAAAGTGTCAACAGGCCTGTGCTGTTGCAAGCAGACTTTTTAATTCCTCAGAGTCATCATCAGCTcgAGGTAATGCATCTGCAGCAGCGCTGGCAGGAGCTGAAGGAGAGAGAGCTTACAGCCCAACATCACAacaggctgctgctgcagcagttTGACGAAGCCCAGGACACACTGAGCGAGATGATAACTCTCACTGCTGCCATGAAAACTATTCGGAAGGAGTATGAACGGTACTTGGAGGAGAACTCCCCCCGCTGGCAGCAGCAACTCAAGGAGAAAACACAGGCTGCTCAGAGGAAGAGGATGGAGGAGTATTTGAGGTCATGTCTAAAGAACACAGAGGACCATGTGACAAAGTCCTCTGCAGATCGACCTTCACTTTCACAAGCAGGCCCTTCCACAATGCCAAAAGACATTGCCACACCTCCAAAGCACTACAGCCAAAACAGCCATTTAGACTACAACCAAGATGGCTCCCCTCATCTCCCCTATATGCAGTCTTCCAGGCAGACCTACCCTCAATCCCAGATGGCTAGGTTTCCAATCAGAGCGCCCTATCAACCTCAGGGTTCCTCTCATGTCCCTCCATCGTTCCTCCCGCCACGCATCTTCCCACATCCTCACTCATTCCAGCTCAACCACCTCGCCTCCACACCTGGTCATCATCCCCCCAGCCCCAGGCAAAACCCCCCAGGCTGGGCTTCCCTGCAGCCAGACTACCCCTGGTCCTGGGCTGCTGGTGCGGCTGGGATCCCTCAAGGCTCCGAGCCTCTGTGGGGTCAGCTGTACATGCAGGAGCCTCCTCCTGAGGCAGGGGTGGCGGGGGAGGAGGCTGACACAAGCCGAGCACCGAGctcaaagagagagacaggtggtGGAGACAGGATCAGTCATGCATCCCAGGAGCTGGACATCAAACCAGTTCGTCTGTCCGATGGCCATGCAGAGAGCAGTGAGAGCAGTCAGGtgagcagagagaagaggaagaagaagcagGAGAGAGGAAAATCACAGTGTTCCTCAGACAGAGAAAGATGCAGCTCTCAGAAGTCATCTAGGACTTCCAGTGCCATTGTCATTGCTGCAGTCACAGTGGCCCAAAGCTCTGAAAGTGACGACTCATCAGTGAAAGGCAGAACCAGCACTAGTAGGGGGATGAGGAGAAGTGGGGGGCTTACCGCTGAATCACCAAGGGCTGAGAAGGTAGAAAAGGGAAGCAAGGAAGTTGACTCAGGTAGTCACAAAGAAGAGAATCAGTCTACTAGTGAGGAGTTACAGAGTCTAGCTGAGGAATCCAGGAGTGAAAAAGTGGGTAACCAAAGTCCTGATGACAAATCTGAGAACTATAGAGAGGAGTCTGCATCCCAGAGAGAGGAGCGATCAGCAAGTGTTAGTCGAAGGATTGAAAACGGAGGTGgagctgaaatggaaaagcAGAATAGCAGCTCTGAACAAAGCAATGGAATAGAAAAGGATGAGGAAGAGCTAGCAGACGATGGGGATGCTGAAGAGAACAgtcagacagatggagagaaagcGGAAAGAAATGTGGAGGATAACGATGCTtctgaaagaaagaataaagcagaggaagaagaggagacagaggaaaaggATGAGGAGTCAGAGGAAGAGGGTGATCATGAAGAAAGACAGTCAGACAGGTTGAAGAATGAAGATGGGGAGAACGGACAAGAGGGTTCTGCATCCTCTCAGGATGAAGAGGTGGATGAGGATGAGAGCGAAGGAGGCGAGGACAACATGGAGGAGGACGGGGAGtcagatgaagaggaggaaggagcgggggaggaggaagaggagcagagaaGAGACAAAACAGGAGAAGCTGAGAAGGAAAGCGATTCAGAGGACAGTATCATCTCACCACAAGACAAATCTAAAAAGATGCACACTATTGCCGAGGAGGCaagtgaagatgatgatgataatgaggGGAGGAGTAAAATGGGATCCTCCGATGATGACTCGAATGAGTTCAGTGATGAGGATGATGTTGAGCATCTACTTGCACCTCAAGAACAATCACAGAAAAAAGAAGAAAAGGACCTGAGAGCTGATGAGAAACCTAAAGTTATTTGTGACAACGTGGACATTTTTCAAGTGGACAAATCGACAAAATCGGATCACCCAAGTGACTCTGATGAGTTTGACAACTTTTATGGCTAAATGGGTTTTCTCTCAACTGCCAAAACTCAAGAATAGAAGGACAAAAGTCTACCTCATAATTTAGTTACATTTGAGAATTATATtaaaacatgttgttgttga
>XM_039814021.1
TCTCTGCATCCACTGAACGCCTGCAGTCATGGCTGCATCAAGGGAGAATTTACTGTCTCTCGGACATCTGACAGGCACAGAAAGAAACACTTTCACAAAACAAAGAGAGCAGAGTCTAAAAAAAAGTGTCAACAGGCCTGTGCTGTTGCAAGCAGACTTTTTAATTCCTCAGAGTCATCATCAGCTcgAGGTAATGCATCTGCAGCAGCGCTGGCAGGAGCTGAAGGAGAGAGAGCTTACAGCCCAACATCACAacaggctgctgctgcagcagttTGACGAAGCCCAGGACACACTGAGCGAGATGATAACTCTCACTGCTGCCATGAAAACTATTCGGAAGGAGTATGAACGGTACTTGGAGGAGAACTCCCCCCGCTGGCAGCAGCAACTCAAGGAGAAAACACAGGCTGCTCAGAGGAAGAGGATGGAGGAGTATTTGAGGTCATGTCTAAAGAACACAGAGGACCATGTGACAAAGTCCTCTGCAGATCGACCTTCACTTTCACAAGGCCCTTCCACAATGCCAAAAGACATTGCCACACCTCCAAAGCACTACAGCCAAAACAGCCATTTAGACTACAACCAAGATGGCTCCCCTCATCTCCCCTATATGCAGTCTTCCAGGCAGACCTACCCTCAATCCCAGATGGCTAGGTTTCCAATCAGAGCGCCCTATCAACCTCAGGGTTCCTCTCATGTCCCTCCATCGTTCCTCCCGCCACGCATCTTCCCACATCCTCACTCATTCCAGCTCAACCACCTCGCCTCCACACCTGGTCATCATCCCCCCAGCCCCAGGCAAAACCCCCCAGGCTGGGCTTCCCTGCAGCCAGACTACCCCTGGTCCTGGGCTGCTGGTGCGGCTGGGATCCCTCAAGGCTCCGAGCCTCTGTGGGGTCAGCTGTACATGCAGGAGCCTCCTCCTGAGGCAGGGGTGGCGGGGGAGGAGGCTGACACAAGCCGAGCACCGAGctcaaagagagagacaggtggtGGAGACAGGATCAGTCATGCATCCCAGGAGCTGGACATCAAACCAGTTCGTCTGTCCGATGGCCATGCAGAGAGCAGTGAGAGCAGTCAGGtgagcagagagaagaggaagaagaagcagGAGAGAGGAAAATCACAGTGTTCCTCAGACAGAGAAAGATGCAGCTCTCAGAAGTCATCTAGGACTTCCAGTGCCATTGTCATTGCTGCAGTCACAGTGGCCCAAAGCTCTGAAAGTGACGACTCATCAGTGAAAGGCAGAACCAGCACTAGTAGGGGGATGAGGAGAAGTGGGGGGCTTACCGCTGAATCACCAAGGGCTGAGAAGGTAGAAAAGGGAAGCAAGGAAGTTGACTCAGGTAGTCACAAAGAAGAGAATCAGTCTACTAGTGAGGAGTTACAGAGTCTAGCTGAGGAATCCAGGAGTGAAAAAGTGGGTAACCAAAGTCCTGATGACAAATCTGAGAACTATAGAGAGGAGTCTGCATCCCAGAGAGAGGAGCGATCAGCAAGTGTTAGTCGAAGGATTGAAAACGGAGGTGgagctgaaatggaaaagcAGAATAGCAGCTCTGAACAAAGCAATGGAATAGAAAAGGATGAGGAAGAGCTAGCAGACGATGGGGATGCTGAAGAGAACAgtcagacagatggagagaaagcGGAAAGAAATGTGGAGGATAACGATGCTtctgaaagaaagaataaagcagaggaagaagaggagacagaggaaaaggATGAGGAGTCAGAGGAAGAGGGTGATCATGAAGAAAGACAGTCAGACAGGTTGAAGAATGAAGATGGGGAGAACGGACAAGAGGGTTCTGCATCCTCTCAGGATGAAGAGGTGGATGAGGATGAGAGCGAAGGAGGCGAGGACAACATGGAGGAGGACGGGGAGtcagatgaagaggaggaaggagcgggggaggaggaagaggagcagagaaGAGACAAAACAGGAGAAGCTGAGAAGGAAAGCGATTCAGAGGACAGTATCATCTCACCACAAGACAAATCTAAAAAGATGCACACTATTGCCGAGGAGGCaagtgaagatgatgatgataatgaggGGAGGAGTAAAATGGGATCCTCCGATGATGACTCGAATGAGTTCAGTGATGAGGATGATGTTGAGCATCTACTTGCACCTCAAGAACAATCACAGAAAAAAGAAGAAAAGGACCTGAGAGCTGATGAGAAACCTAAAGTTATTTGTGACAACGTGGACATTTTTCAAGTGGACAAATCGACAAAATCGGATCACCCAAGTGACTCTGATGAGTTTGACAACTTTTATGGCTAAATGGGTTTTCTCTCAACTGCCAAAACTCAAGAATAGAAGGACAAAAGTCTACCTCATAATTTAGTTACATTTGAGAATTATATtaaaacatgttgttgttga
>XM_039814022.1
TCTCTGCATCCACTGAACGCCTGCAGTCATGGCTGCATCAAGGGAGAATTTACTGTCTCTCGGACATCTGACAGGCACAGAAAGAAACACTTTCACAAAACAAAGAGAGCAGAGTCTAAAAAAAAGTGTCAACAGGCCTGTGCTGTTGCAAGCAGACTTTTTAATTCCTCAGAGTCATCATCAGCTcgAGGTAATGCATCTGCAGCAGCGCTGGCAGGAGCTGAAGGAGAGAGAGCTTACAGCCCAACATCACAacaggctgctgctgcagcagttTGACGAAGCCCAGGACACACTGAGCGAGATGATAACTCTCACTGCTGCCATGAAAACTATTCGGAAGGAGTATGAACGGTACTTGGAGGAGAACTCCCCCCGCTGGCAGCAGCAACTCAAGGAGAAAACACAGGCTGCTCAGAGGAAGAGGATGGAGGAGTATTTGAGGTCATGTCTAAAGAACACAGAGGACCATGTGACAAAGTCCTCTGCAGATCGACCTTCACTTTCACAAGCAGGCCCTTCCACAATGCCAAAAGACATTGCCACACCTCCAAAGCACTACAGCCAAAACAGCCATTTAGACTACAACCAAGATGGCTCCCCTCATCTCCCCTATATGCAGTCTTCCAGGCAGACCTACCCTCAATCCCAGATGGCTAGGTTTCCAATCAGAGCGCCCTATCAACCTCAGGGTTCCTCTCATGTCCCTCCATCGTTCCTCCCGCCACGCATCTTCCCACATCCTCACTCATTCCAGCTCAACCACCTCGCCTCCACACCTGGTCATCATCCCCCCAGCCCCAGGCAAAACCCCCCAGGCTGGGCTTCCCTGCAGCCAGACTACCCCTGGTCCTGGGCTGCTGGTGCGGCTGGGATCCCTCAAGGCTCCGAGCCTCTGTGGGGTCAGCTGTACATGCAGGAGCCTCCTCCTGAGGCAGGGGTGGCGGGGGAGGAGGCTGACACAAGCCGAGCACCGAGctcaaagagagagacaggtggtGGAGACAGGATCAGTCATGCATCCCAGGAGCTGGACATCAAACCAGTTCGTCTGTCCGATGGCCATGCAGAGAGCAGTGAGAGCAGTCAGGtgagcagagagaagaggaagaagaagcagGAGAGAGGAAAATCACAGTGTTCCTCAGACAGAGAAAGATGCAGCTCTCAGAAGTCATCTAGGACTTCCAGTGCCATTGTCATTGCTGCAGTCACAGTGGCCCAAAGCTCTGAAAGTGACGACTCATCAGTGAAAGGCAGAACCAGCACTAGTAGGGGGATGAGGAGAAGTGGGGGGCTTACCGCTGAATCACCAAGGGCTGAGAAGGTAGAAAAGGGAAGCAAGGAAGTTGACTCAGGTAGTCACAAAGAAGAGAATCAGTCTACTAGTGAGGAGTTACAGAGTCTAGCTGAGGAATCCAGGAGTGAAAAAGTGGGTAACCAAAGTCCTGATGACAAATCTGAGAACTATAGAGAGGAGTCTGCATCCCAGAGAGAGGAGCGATCAGCAAGTGTTAGTCGAAGGATTGAAAACGGAGGTGgagctgaaatggaaaagcAGAATAGCAGCTCTGAACAAAGCAATGGAATAGAAAAGGATGAGGAAGAGCTAGCAGACGATGGGGATGCTGAAGAGAACAgtcagacagatggagagaaagcGGAAAGAAATGTGGAGGATAACGATGCTtctgaaagaaagaataaagcagaggaagaagaggagacagaggaaaaggATGAGGAGTCAGAGGAAGAGGGTGATCATGAAGAAAGACAGTCAGACAGGTTGAAGAATGAAGATGGGGAGAACGGACAAGAGGGTTCTGCATCCTCTCAGGATGAAGAGGTGGATGAGGATGAGAGCGAAGGAGGCGAGGACAACATGGAGGAGGACGGGGAGtcagatgaagaggaggaaggagcgggggaggaggaagaggagcagagaaGAGACAAAACAGGAGAAGCTGAGAAGGAAAGCGATTCAGAGGACAGTATCATCTCACCACAAGACAAGTAAGATAATTAAAGAATTAAATGATCTTAATCACAAACGACAGCAACTGAACTTTAAGCAATCTGTTGTTTTCAGATCTAAAAAGATGCACACTATTGCCGAGGAGGCaagtgaagatgatgatgataatgaggGGAGGAGTAAAATGGGATCCTCCGATGATGACTCGAATGAGTTCAGTGATGAG

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814020.1 True 2413 mRNA 0.49 11 22778405 22783217
XM_039814021.1 False 2410 mRNA 0.49 11 22778405 22783217
XM_039814022.1 False 2207 mRNA 0.50 8 22778906 22783217

Neighbor

gene id symbol gene type direction distance location
slc16a2 slc16a2 coding downstream 35334 22718894 ~ 22743071 (-)
tsc22d3 LOC103390732,LOC104954424,LOC101161414,LOC103356417,LOC102306956,LOC102786303 coding downstream 370194 22375266 ~ 22408211 (-)
pcdh11 LOC104946172,LOC103356418,LOC101473199 coding downstream 762652 21884772 ~ 22015753 (-)
si:ch211-175m2.5 LOC104942593,LOC103358585,LOC101471829 coding downstream 1081322 21692687 ~ 21697083 (-)
LOC120566697 NA coding downstream 1156797 21619863 ~ 21621608 (-)
dpf2l dpf2 coding upstream 47193 22830410 ~ 22840569 (-)
si:ch211-168f7.5 LOC103356264,LOC104942684 coding upstream 78931 22862148 ~ 22874782 (-)
ehd1a LOC104934092,LOC103356238,LOC105928696,LOC102204816,LOC101482200,LOC100701452,LOC104942686 coding upstream 100868 22884085 ~ 22899160 (-)
si:ch211-114c17.1 LOC103374192,LOC100701998,LOC102296932 coding upstream 126940 22910157 ~ 22918782 (-)
ganabb ganab coding upstream 136627 22919844 ~ 22934564 (-)
G107102 NA non-coding downstream 59635 22713037 ~ 22718770 (-)
G107097 NA non-coding downstream 92947 22683733 ~ 22685458 (-)
G107072 mid2 non-coding downstream 172737 22601140 ~ 22605668 (-)
G107070 NA non-coding downstream 183524 22592660 ~ 22594881 (-)
LOC120566739 NA non-coding downstream 186159 22590860 ~ 22592246 (-)
G107160 NA non-coding upstream 72908 22856125 ~ 22856346 (-)
G107215 NA non-coding upstream 92279 22875496 ~ 22876459 (-)
G107220 NA non-coding upstream 145637 22928854 ~ 22973760 (-)
G107282 NA non-coding upstream 386931 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding upstream 396475 23179692 ~ 23181717 (-)
G107117 NA other downstream 85574 22691160 ~ 22692831 (-)
G107015 NA other downstream 658338 22119685 ~ 22120067 (-)
G106988 NA other downstream 987680 21790253 ~ 21790725 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 1590752 21178852 ~ 21187653 (-)
G106728 mif other downstream 1647435 21127838 ~ 21130970 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 207770 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 309348 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other upstream 346492 23129709 ~ 23134785 (-)
rnaseh2c rnaseh2c other upstream 400975 23184192 ~ 23187058 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 1101371 23884588 ~ 23988901 (-)

Expression


Co-expression Network