urp1



Basic Information


Item Value
gene id urp1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 25186589 ~ 25189449 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039814043.1
GTCCATGACGCCTGATCCATCGCGTCAAAACCATTAAGAAGGAGACTGGGTGTGATGATAATGTATTGATCAGGTTGTGATGGATGACCACTGAAGATATATAAGTGAAGTTCTTTGCCGAGCAGAGTTATCGTCCAGATCTGTCCATCCAAAGAGAGAGGCACCATGCTTTCTGTAGCTCTGTTTTACCTCGTAGCTGTGATTTGTTCTGCAAGACGGACACATGCTCTACCTCTGTACCCTGATACCAACCTGGAGCCACAAGCAGATTTCCTTCAGAAATTAGTGTCAGAAGTGGAGGATGGACCCAACACTGCTGAGGGGGAGCAGAGAGAGGTGAATAACCTGTATCCTCTATTGATGCAGCACAATGGAGGGAGAGAGTCCTGgaataaagGGGCTAAAGATTCAGCACAACAAGATAAATTTACTAACATGGTCGAGGACCTCAGAGAAGTCGTCTTGAAGCTGGCAGCGGCTGACAAGCTTCGCTCTCAGGGTTTTCTTAGATCAGAACAGAACTtgccaaaaacaaacaaaagagCATGTTTCTGGAAATACTGTGTCACCAACTAGAGCCCAGCTGCTGCAGGGCGTTTGGTGTGACTTCGGCACGGCCTGGGTGGCAACGCCTTCACCACTGTCcatcatcatttttattttcattttcattttgcacCAATCAGTAGCCTATATTCACCTTCTATACTGGATCAACAGAAACTATATTTTTGGAGctttaaattgttttgtttttgtgtctgaaaataaacttGAATATCAGAAATGCCA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039814043.1 True 792 mRNA 0.44 5 25186589 25189449

Neighbor


gene id symbol gene type direction distance location
si:ch73-335m24.2 LOC100690735,LOC102798665 coding downstream 13749 25167221 ~ 25172840 (-)
ocrl ocrl coding downstream 20834 25147946 ~ 25165755 (-)
vimr2 NA coding downstream 38731 25130146 ~ 25147858 (-)
xpnpep2 xpnpep2 coding downstream 172699 25000755 ~ 25013890 (-)
sash3 sash3 coding downstream 193285 24983493 ~ 24993304 (-)
mcts1 mcts1 coding upstream 8869 25198318 ~ 25200515 (-)
atp1b4 atp1b4 coding upstream 43737 25233186 ~ 25238614 (-)
zbtb33 zbtb33 coding upstream 63316 25252765 ~ 25257632 (-)
sowahd NA coding upstream 93352 25282801 ~ 25284565 (-)
pttg1 NA coding upstream 95256 25284705 ~ 25290134 (-)
G107923 NA non-coding downstream 111 25180938 ~ 25186478 (-)
G107907 NA non-coding downstream 112757 25073181 ~ 25073832 (-)
G107903 NA non-coding downstream 205792 24977124 ~ 24980797 (-)
G107890 NA non-coding downstream 295873 24890301 ~ 24890716 (-)
G107889 NA non-coding downstream 301162 24885009 ~ 24885427 (-)
G107992 sept6 non-coding upstream 102168 25291617 ~ 25297266 (-)
G108031 NA non-coding upstream 459085 25648534 ~ 25648780 (-)
G108036 NA non-coding upstream 490643 25680092 ~ 25680437 (-)
G108040 NA non-coding upstream 585133 25774582 ~ 25774823 (-)
G108082 NA non-coding upstream 1262361 26451810 ~ 26452058 (-)
trnav-uac_15 NA other downstream 324405 24861970 ~ 24862184 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other downstream 607490 24573441 ~ 24579099 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 1197688 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 1999531 23184192 ~ 23187058 (-)
G107284 LOC103374305,LOC102779018 other downstream 2051804 23129709 ~ 23134785 (-)
ndufa1 NA other upstream 73723 25263172 ~ 25264864 (-)
G107989 NA other upstream 90154 25279603 ~ 25288086 (-)
diaph2 NA other upstream 647881 25837330 ~ 26258199 (-)
rpl36a LOC106604455,LOC100304549,LOC100219516 other upstream 1268546 26457995 ~ 26460732 (-)
G108181 LOC103390578 other upstream 1799815 26989264 ~ 27001011 (-)

Expression



Co-expression Network