LOC120567242


Basic Information

Item Value
gene id LOC120567242
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20096016 ~ 20098579 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814148.1
GGGTCTCTGGGACTGCCTCTGAAGCATTCAGAAGGGCAGACCATTTTCCTCCGAATGTAATTTGTTCCAACGATTTTGTCGTCTAGACAAACCGAGCGCATTATAAGACGGTGGTTTTTGTTCTCAATTAATGGATATGTAAACAGTCTGTAGATCACTTGGTATTTACTGGATTTATCAACTGTCCATAAGCAATGGAACAAAGCGGAACGGACTCCTGGCGACAAGAAAGCAAATGGGTGGTCCTCGTGCTGGCTTTTAATTTGATTTTCGGCAATGCATCTGGACAGATAAGATATTCTATATCGGAAGAGATCAAAGAGGGGACTGCTGTTGGGAATATAGCAAAGGATCTGGGAATAGATTCTAATATATTAAAAGCAAGGGGATTTCGTATCGTTTCTGGCTCCAGTGAACCCCTTTTCCAGGTAAACCAAGATGATGGGATTTTATACGTAAATCGGAATATTGACCGTGAGGAAATATGCCAGCGGACTAATGTATGTTTGATAAACCTTAAATCCGTGCTAGAGAACCCACTGGAGATCCATTATGTTGCTGTGGAAGTGTTAGACATAAATGACCATTCGCCTTCTTTCCCGGAGAACAACAAAAGGCTAGAGATTTCAGAGTCCACCTTACCGGGAACCAGATTTCAGTTGCATGCTGCTCTCGATCCAGATGGTGGTGTGAATTCCGTTCAACAGTATAGGCTAAGTCCTAATAATAATTTTCGTCTAGAGGTGAAAGATAGCGGGAAAGATGGCAAAGTGCCTGTTTTACAGATACAAAGCCCGTTAGACAGAGAGACCTCTAGCAGCCACAAACTACTGCTCACAGCCATGGATGGGGGTAAACCTCCTAAATCAGGGACCATGGAAATATCTATAGACATATTAGATGTGAACGACAATGCGCCAGTTTTTACTAAAGATGTCTATTCTGTAGAGATAAATGAGGATTCGCCAATTGGAACAATAGTCATACGAGTAAATGCCACAGATATGGACGACGGATTAAATGGAGATGTTAGCTATTCTTTTGGTAATGTGAATAGTAAGGTGCGCGAACTGTTTGATGTCGACCCGAACACAGGTGAAATAACAGTGAAAGGACAATTAAACTATGAAGTGGATGACAGTTACGAGATTAATATCCAGGCATCTGACAGCGGTGCTGTTCCGTTTAGAACTGAAAAAAGcgttactgtaaatattaaagaCATAAATGACAATGCACCTATAATTGAGGTAACGTCACTGTCGAACACAATTTCAGAGGATTCCAGACCAGGAACAACGGTAGCACTTCTTAGCATTACCGATTTGGACTCTGGAGTAAACGGGAAAATTATAAGCTTTGCAAAAGGCGATGTCCCTTTCACACTAACGCCATCAATACAGGACAACATGTACGCTGTCGTGACAAAGTTGCAGCTTGACAGGGAAAATAAATCGATTTATGATGTAACAGTAATCGCAAAAGATGCAGGCGAACCAGCCTTAACGTCTGTAAAGACATTAAGAGTTGTTGTTTCTGACGTTAACGATAACAGCCCAGAGTTTTCAATAAGCCGATATAATTTTTATGTCACTGAAAATAACCCTCCCGGAATGTCGGTGTTTTATTTAACTGCGTCTGATCGTGACGAAGGAGATAATGCTCTTATTTCGTACAATATTCTAAGAGATGCAGTTTATGCAAATTCAGTGACGTCATTTCTCAGCATAAACTCTGAAACTGGAGATATTTCGGCGCTAAAAAGTTTTGACTTTGAAACACTGAAAACGTTCCAGTTCCAAGTTGTTGCCACAGATTCTGGAACTCCGTCACTAAGCAGCAACGTCACAGTGAACGTGTTCATTCTGGATCAGAACGACAACGCTCCAGTCATCCTGTATCCAGTCAGCTCTAACGGTTCTGCTGAAGGTGTGGAGGAGATTCCCCGCAATGTGAACGCAGGACACTTGGTGACTAAAGTCAGAGCCTATGACGCTGATATAGGATATAACGGCTGGTTActgttttcactgcaggacgTTACTGACCACAGTCTCTTTGGTTTGGACCGCTATACAGGACAGATCAGAACACTTCGCTCATTCACAGAGACAGACGAGGCGGAGCATAAACTGGTCATACTGGTGAAAGACAATGGGAACGTTTCACTCTCAGCAACAGCTACTGTGCTTGTCAAAGTTGTGGAGCCCAAAGAGGCTTTTGCTGCTTCTGATGTTAAAAGTGCAACaaaggatgaggaggagaataATGTGACTTTTTACCTGATGATAACTTTGGGCTCagtttcaacactttttctcaTCAGTATCATCGTGCTGATTGCAATGCAGTGCTCCAAAACCACAGActatacttctaaatatctacaagAGACTAATTATGATGGGACACTGTGTCACAGCATCCAGTACAGATCTGGAGACAAACGGTACATGCTAGTAGGACCCAGAATGAGTATAGGATCTACTATAGTCCCCGGCAGCCATGCGAATACACTAGTGCTCCCTGACAGGAGAGGGACATCTGGAGAGGTAAGACTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814148.1 True 2564 mRNA 0.42 1 20096016 20098579

Neighbor

gene id symbol gene type direction distance location
LOC120566533 LOC103375287 coding upstream 10809 20082373 ~ 20085207 (+)
LOC120566532 LOC103375285,LOC102798382,LOC102309450,LOC101072791,LOC101076589,LOC106516975 coding upstream 17647 20075753 ~ 20078369 (+)
LOC120566530 LOC103375287 coding upstream 21041 20072355 ~ 20074975 (+)
LOC120567232 LOC103375287 coding upstream 24959 20068463 ~ 20071057 (+)
LOC120566529 LOC103375284,LOC102199591,LOC108242356,LOC106933149,LOC106516975 coding upstream 28451 20064986 ~ 20067565 (+)
LOC120567243 NA coding downstream 1014 20099593 ~ 20102097 (+)
LOC120567189 LOC101076589,LOC107376492,LOC103375150,LOC102305013,LOC101074748,LOC101075026,LOC107989589,LOC106514196,LOC107373859,LOC102308212,LOC106604881,LOC106604828,LOC103390873,LOC101161607,LOC102780923,LOC101465246,LOC101074087,LOC104937910,LOC103366336,LOC104959671 coding downstream 4444 20103023 ~ 20256413 (+)
LOC120567239 LOC103375145 coding downstream 7344 20105923 ~ 20108462 (+)
LOC120567236 LOC108242382,LOC102303179,LOC106516872,LOC101076589,LOC101068049,LOC107374054 coding downstream 16343 20114922 ~ 20145603 (+)
LOC120567223 NA coding downstream 63001 20161580 ~ 20164367 (+)
LOC120567444 NA non-coding upstream 97215 19973785 ~ 19998801 (+)
LOC120566743 NA non-coding upstream 141053 19950757 ~ 19954963 (+)
G106351 NA non-coding upstream 154301 19940938 ~ 19941715 (+)
LOC120566488 NA non-coding upstream 247738 19844839 ~ 19848278 (+)
G106218 NA non-coding upstream 493923 19515958 ~ 19602093 (+)
LOC120567249 NA non-coding downstream 175254 20273833 ~ 20275911 (+)
G106577 NA non-coding downstream 611930 20710509 ~ 20731673 (+)
G106679 NA non-coding downstream 1001905 21100484 ~ 21100835 (+)
G106684 NA non-coding downstream 1008919 21107498 ~ 21108359 (+)
G106707 NA non-coding downstream 1094487 21193066 ~ 21194849 (+)
LOC120566323 LOC102781894,LOC101481808 other upstream 34678 20028863 ~ 20061338 (+)
G106237 spock1 other upstream 443542 19604840 ~ 19652474 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 1126070 18963934 ~ 18969946 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 2196285 17890170 ~ 17899731 (+)
G105677 NA other upstream 2410317 17682919 ~ 17685699 (+)
G106465 LOC104955902 other downstream 253142 20351721 ~ 20352167 (+)
hrh2a LOC103354784,LOC104948895 other downstream 836150 20934729 ~ 20947415 (+)
selenoh selenoh other downstream 1181108 21279687 ~ 21283229 (+)
zdhhc5b zdhhc5 other downstream 1190952 21289531 ~ 21350978 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other downstream 1350221 21448800 ~ 21468827 (+)

Expression


Co-expression Network