gjb1b (LOC107093452,LOC101485490,LOC102291952)


Basic Information

Item Value
gene id gjb1b
gene name LOC107093452,LOC101485490,LOC102291952
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16513561 ~ 16518060 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814232.1
ATCATTTCATTCTGTTTTATTCTAACATTCTGTGTGCAATGAGGTCAGATTTTATGCGAGTGATGGCTCACATGCCCCATTGCCTCGACAAACACTTGCCATGTTGTTTAACCTATCGTTACCCTTTTATAGTAATATTATTTGAATGAATCCGCTTATGACGTGTGATCATTTCAAGTTTTTATGAGGTAAATCTGGTGAAGTCTGTTGCCTTCTTTAGAACAAAAGAGGTCTCTCagttgtcttaaaaaaaaaaataaatctaatgaGATGGATGTCTTGCTGGTTCCTTGGAGAAATTTGCTGGCAGTccgtcagtctgtctgtctgcaacTGGGCTGTAGGTCAGTTTGGGAGTACAGTATTAATACAGGGTGAGCCAATCACGTGGCTCGGCGAATGCTTCGCAATTGGCTTCGTCGCGTTGCGTCTTGTGACGGCGCACGGCGGTAGGCCATCACCCCTGCTTTTATACGGCCAACTTGCTACTCGGCAATTCTTTTCTGTGTTCCTCACTCTGCCAGCTTGATGCTCAGGCCACACCTCAAGATGGTCATCTTTGGACCCGGCGCTGCTTACGCCGCTTGCACCGCTGGCTGAGTCTGACCTGGAGTCGAAAATGAACTGGGGGACCTTTTATGCCGTGGTCAGCGGCGTAAACAGGCACTCCACCGGCATCGGACGCGTTTGGCTCTCCGTCATCTTCATCTTCCGTATCCTGGTCCTGGTGGTCGCCGCTGAGAGCGTTTGGGGAGACGAGAAGTCCGGCTTCACCTGCAACACCCAGCAGCCCGGCTGCGACAGCGTCTGTTACGACCAGTTCTTCCCCATCTCGCACATCCGCCTGTGGGCGCTCCAGCTCATCCTGGTCTCCACCCCCGCCCTGCTGGTGGCCATGCATGTGGCCCACCGACGCCACGTCGACAAGAAGATCCTGAAGAGGACGGGCCGCGCCAGCCCCAAGGAGCTGGAGCACATCAAGAACCAGAAGTTTCAGATCACCGGAGCTCTTTGGTGGACATACATGATCAGTATCCTCTTCAGAATCCTCCTGGAGGTGGCTTTTCTCTACATCTTCTACTTGCTTTATCCTGGCTTTAAGATGGTGCGTCTGGTAAAGTGTGACTCGTACCCATGCCCCAACACGGTGGATTGTTTTGTCTCCAGGCCGACCGAAAAGACCATATTCACCGTGTTCATGCTGGCAGTGTCTggggtgtgtgtgctgctgaaCCTGGCTGAGGTGGTATACCTCATAGGCAGGGCCTGCAAACGGTGCTTACGAGGCTCTGACGAAGAGTCCAAAGTCGCTTGGATAAGTCAACGATTGCCTACTTATAGACAAAATGAAATCAATCAACTGATAGCAGACCACTCTCTCAAGTCGAAGTTAAATGTGACCAAAAAGAGCCCAACTGAGAAGGGTGAAATGTGTTCTGCTTTCTGAGACTCTGCCTCTCCTGTTCCCGTCGAACTAATCAACAGTAATCGCACACGTCCCTGGAGTATTTTGCTCTGCATTAATGTCACATATTCTGTATATTTCATCATTGTCAGCAGACACATTTGgactatttatttatgcatCACTCAGTCTACCGCATATTGAgtcatctgtttttttctttgttattgGTTTTACTGAGTAGTAGCTGTGTTGCTGTTGGAACTCATAGTAGCCAGTAGTGAAGGTTAAAGGACCATAGCATATCGGCGTTTTAGTCCACTTACTAAAAGTCTGgcatttttgttgatttttagtGGTTTCATTTAAATAGCTGAGGCGCAGAAACCATGCTTGTGTCATGGTTGCGTGATAATACAGTTCTCAATATGGATTTGTTTGAAAATCCTGCAGATGTTGGCACACTGGTTAGAAACCACCAACTGCTGCTACGCAGTTGTATTTACAAGCTATGATGCATGGAAAGTATGCCCATTAAGCAAACCTtgatttgaaaaatgaatatttattatttgGCATTATAAAGGTTTCTTTTAGGGAAACAACTGGATTCTTGGATGTCAGTTTATTTCCAGCACACAGATCCACTGCGCTGCAGATTTGTCACATTTCAGCTGCTTTGTCACGCAACAAGAGTGTAGCTTTGACACATATAAAGGAAACGGGCAGCTGTCCGGAAGGCacgaaaacataaaaaaacttacaaaattaatttaatttggcCAAAATGTGCAGAAACACTGTTATGGTTCTCAAAGTTGCAAAGATTACAGTAGAGATTAAAATGCTGGATAAAAAGGGGAACTTTTTATTTACATGAAACATGTTGATATGTGCCATATTTATTCCAGTCGGAATCAAAGCTACATAATAGAGGAAAAGGGCATTTATGTATTAAAGTAAATGAGTAAGAGTACAGTAAATGCCATTAAATGTCAGTAACAGCCCTTTAAGACAAGTGGTGTGCTTGGATTATATTGGACAGTTTTAGTTATTTGACTTTGATGAACTTTGTACACACAGCAGTAACTATTATGTATCTTAGCACACTGCTATTCCGATATTTTAACATTTGGTGCTAGAAAACCAAAGAAAGTTTTTAAAATAGTCCAGGTACGGACAACTGTCATTTCATGTTAACGTTTTAcaagtgatttaaaaataaaattcattTGAAAACAATTTTCCACAAACGTATTTTTACAACTGACCTATTAATTATATATCTTGACAGAGTAGTCAGAATGGTGCACAGGGCAAAAGTATATTTCAATAAACCTTGTAAaagtactgtacatatatgTCTTTGGATTCAGTTGTAAACACTGCCTACTTACTTCATTGTGCCTTCTGTTTGAGTTGATCTTTGTTTGTGAAAAATGCTTGAGGTTGACCTACTTTATAACAGAGACAGTTGCACTTGCTTTCCTTAATATTGTCCTGTATGAAATTACTCGGTATCTCTCTGGTCCTGAAAATGTAATGTCCCATACGCTGGTATCCGTTTATACAACTGTTCTTTTATAAAGTTATACACATTGTAGGGCGTACAAAAACCCTGTTGTCAACATTTATTCTGTACATGCAGTATATGAATTTACACACGGGTAAACAATCCGGTTAATAAGTAATATGGGTTGAAACAATATGTGTTCTTTATGTAATATAAAGAAATAAACTACCTGAtaattttga
>XM_039814233.1
TGAACAGctcatgtattttttatttttttgggatgAATCTGCAAACCTGTTAGTGACTCAAAGACGGTGCCTCAGGTCTAAAAGCTTCCTTCACTTCCCTGCCCTGCCAAGCACAATAAATAATGTGGCAGGCTGAGGCCTTTTGTGTCCACACAGATTCCTTCTTTTGCCCGGGGTAGGCGGAAATCGAGGCGTTTGATCTGAATTCTAAAGAGTCTTGTTGCAGCCCAATAAAGGCTGCCATTGTATGTAAATAGTTTATATAAGAGCATATGACTGCTACGGTGCAGGGCACTGGCTAGCGGCGGAGGAATGATTAGCATTTTCCAAACGCATGGTGTTCTCAGCCAGCCTTCTggctttctttaaaaaaaaacactattttaaTTAATATCTTCTTTGTACACATTTTTGTGTACCAACACAGCTGAAGACCTGGAGTCGAAAATGAACTGGGGGACCTTTTATGCCGTGGTCAGCGGCGTAAACAGGCACTCCACCGGCATCGGACGCGTTTGGCTCTCCGTCATCTTCATCTTCCGTATCCTGGTCCTGGTGGTCGCCGCTGAGAGCGTTTGGGGAGACGAGAAGTCCGGCTTCACCTGCAACACCCAGCAGCCCGGCTGCGACAGCGTCTGTTACGACCAGTTCTTCCCCATCTCGCACATCCGCCTGTGGGCGCTCCAGCTCATCCTGGTCTCCACCCCCGCCCTGCTGGTGGCCATGCATGTGGCCCACCGACGCCACGTCGACAAGAAGATCCTGAAGAGGACGGGCCGCGCCAGCCCCAAGGAGCTGGAGCACATCAAGAACCAGAAGTTTCAGATCACCGGAGCTCTTTGGTGGACATACATGATCAGTATCCTCTTCAGAATCCTCCTGGAGGTGGCTTTTCTCTACATCTTCTACTTGCTTTATCCTGGCTTTAAGATGGTGCGTCTGGTAAAGTGTGACTCGTACCCATGCCCCAACACGGTGGATTGTTTTGTCTCCAGGCCGACCGAAAAGACCATATTCACCGTGTTCATGCTGGCAGTGTCTggggtgtgtgtgctgctgaaCCTGGCTGAGGTGGTATACCTCATAGGCAGGGCCTGCAAACGGTGCTTACGAGGCTCTGACGAAGAGTCCAAAGTCGCTTGGATAAGTCAACGATTGCCTACTTATAGACAAAATGAAATCAATCAACTGATAGCAGACCACTCTCTCAAGTCGAAGTTAAATGTGACCAAAAAGAGCCCAACTGAGAAGGGTGAAATGTGTTCTGCTTTCTGAGACTCTGCCTCTCCTGTTCCCGTCGAACTAATCAACAGTAATCGCACACGTCCCTGGAGTATTTTGCTCTGCATTAATGTCACATATTCTGTATATTTCATCATTGTCAGCAGACACATTTGgactatttatttatgcatCACTCAGTCTACCGCATATTGAgtcatctgtttttttctttgttattgGTTTTACTGAGTAGTAGCTGTGTTGCTGTTGGAACTCATAGTAGCCAGTAGTGAAGGTTAAAGGACCATAGCATATCGGCGTTTTAGTCCACTTACTAAAAGTCTGgcatttttgttgatttttagtGGTTTCATTTAAATAGCTGAGGCGCAGAAACCATGCTTGTGTCATGGTTGCGTGATAATACAGTTCTCAATATGGATTTGTTTGAAAATCCTGCAGATGTTGGCACACTGGTTAGAAACCACCAACTGCTGCTACGCAGTTGTATTTACAAGCTATGATGCATGGAAAGTATGCCCATTAAGCAAACCTtgatttgaaaaatgaatatttattatttgGCATTATAAAGGTTTCTTTTAGGGAAACAACTGGATTCTTGGATGTCAGTTTATTTCCAGCACACAGATCCACTGCGCTGCAGATTTGTCACATTTCAGCTGCTTTGTCACGCAACAAGAGTGTAGCTTTGACACATATAAAGGAAACGGGCAGCTGTCCGGAAGGCacgaaaacataaaaaaacttacaaaattaatttaatttggcCAAAATGTGCAGAAACACTGTTATGGTTCTCAAAGTTGCAAAGATTACAGTAGAGATTAAAATGCTGGATAAAAAGGGGAACTTTTTATTTACATGAAACATGTTGATATGTGCCATATTTATTCCAGTCGGAATCAAAGCTACATAATAGAGGAAAAGGGCATTTATGTATTAAAGTAAATGAGTAAGAGTACAGTAAATGCCATTAAATGTCAGTAACAGCCCTTTAAGACAAGTGGTGTGCTTGGATTATATTGGACAGTTTTAGTTATTTGACTTTGATGAACTTTGTACACACAGCAGTAACTATTATGTATCTTAGCACACTGCTATTCCGATATTTTAACATTTGGTGCTAGAAAACCAAAGAAAGTTTTTAAAATAGTCCAGGTACGGACAACTGTCATTTCATGTTAACGTTTTAcaagtgatttaaaaataaaattcattTGAAAACAATTTTCCACAAACGTATTTTTACAACTGACCTATTAATTATATATCTTGACAGAGTAGTCAGAATGGTGCACAGGGCAAAAGTATATTTCAATAAACCTTGTAAaagtactgtacatatatgTCTTTGGATTCAGTTGTAAACACTGCCTACTTACTTCATTGTGCCTTCTGTTTGAGTTGATCTTTGTTTGTGAAAAATGCTTGAGGTTGACCTACTTTATAACAGAGACAGTTGCACTTGCTTTCCTTAATATTGTCCTGTATGAAATTACTCGGTATCTCTCTGGTCCTGAAAATGTAATGTCCCATACGCTGGTATCCGTTTATACAACTGTTCTTTTATAAAGTTATACACATTGTAGGGCGTACAAAAACCCTGTTGTCAACATTTATTCTGTACATGCAGTATATGAATTTACACACGGGTAAACAATCCGGTTAATAAGTAATATGGGTTGAAACAATATGTGTTCTTTATGTAATATAAAGAAATAAACTACCTGAtaattttga
>XM_039814234.1
CACCCACTACATTTGTCATAAGTGACGCAGAAATGCTCATAACACAGTGAACTGCTGTAGGTCATCTGATAATACACCACAAGTGACCACATTGTGTTTTCACTTGCATTGAATTTGTTGCTACTGTAAATGATTGTTTCTACTGTAACGGGAGGAGTTTGACCAGGACAAAATGTGCAATCTCGATGATGCTAAAAAGGAATTCTAAATCCTTTTATAGTTTGTTCAAATGGTGCACCTTAGCTCATTCACAAGCACACTTGTGTGTTATAGCAGATggcagattacattacattactggGAACTGGATATTTGTCTCAATCTGAATACAGTAGCATTTAAATATGTTGTGTCCACAAAAGGATATTATCAAAACAACGGAAGTAAATTTTATTCAAAGGGAATTATTGGTCAAATTAGTTTTAGGCTAAGATAATGAGTCCCCCTGTAAAAAAATGTCAGTTCATAAACAGAAAAAAGTTCATAGTTACAATATATTTGCTTAATTTACAGAATTGCAGCAGTTACATGTGTGACGTGGTTATGACTTGCAGACTGGCGTTTATTTTTTACACCTGGAGTCGAAAATGAACTGGGGGACCTTTTATGCCGTGGTCAGCGGCGTAAACAGGCACTCCACCGGCATCGGACGCGTTTGGCTCTCCGTCATCTTCATCTTCCGTATCCTGGTCCTGGTGGTCGCCGCTGAGAGCGTTTGGGGAGACGAGAAGTCCGGCTTCACCTGCAACACCCAGCAGCCCGGCTGCGACAGCGTCTGTTACGACCAGTTCTTCCCCATCTCGCACATCCGCCTGTGGGCGCTCCAGCTCATCCTGGTCTCCACCCCCGCCCTGCTGGTGGCCATGCATGTGGCCCACCGACGCCACGTCGACAAGAAGATCCTGAAGAGGACGGGCCGCGCCAGCCCCAAGGAGCTGGAGCACATCAAGAACCAGAAGTTTCAGATCACCGGAGCTCTTTGGTGGACATACATGATCAGTATCCTCTTCAGAATCCTCCTGGAGGTGGCTTTTCTCTACATCTTCTACTTGCTTTATCCTGGCTTTAAGATGGTGCGTCTGGTAAAGTGTGACTCGTACCCATGCCCCAACACGGTGGATTGTTTTGTCTCCAGGCCGACCGAAAAGACCATATTCACCGTGTTCATGCTGGCAGTGTCTggggtgtgtgtgctgctgaaCCTGGCTGAGGTGGTATACCTCATAGGCAGGGCCTGCAAACGGTGCTTACGAGGCTCTGACGAAGAGTCCAAAGTCGCTTGGATAAGTCAACGATTGCCTACTTATAGACAAAATGAAATCAATCAACTGATAGCAGACCACTCTCTCAAGTCGAAGTTAAATGTGACCAAAAAGAGCCCAACTGAGAAGGGTGAAATGTGTTCTGCTTTCTGAGACTCTGCCTCTCCTGTTCCCGTCGAACTAATCAACAGTAATCGCACACGTCCCTGGAGTATTTTGCTCTGCATTAATGTCACATATTCTGTATATTTCATCATTGTCAGCAGACACATTTGgactatttatttatgcatCACTCAGTCTACCGCATATTGAgtcatctgtttttttctttgttattgGTTTTACTGAGTAGTAGCTGTGTTGCTGTTGGAACTCATAGTAGCCAGTAGTGAAGGTTAAAGGACCATAGCATATCGGCGTTTTAGTCCACTTACTAAAAGTCTGgcatttttgttgatttttagtGGTTTCATTTAAATAGCTGAGGCGCAGAAACCATGCTTGTGTCATGGTTGCGTGATAATACAGTTCTCAATATGGATTTGTTTGAAAATCCTGCAGATGTTGGCACACTGGTTAGAAACCACCAACTGCTGCTACGCAGTTGTATTTACAAGCTATGATGCATGGAAAGTATGCCCATTAAGCAAACCTtgatttgaaaaatgaatatttattatttgGCATTATAAAGGTTTCTTTTAGGGAAACAACTGGATTCTTGGATGTCAGTTTATTTCCAGCACACAGATCCACTGCGCTGCAGATTTGTCACATTTCAGCTGCTTTGTCACGCAACAAGAGTGTAGCTTTGACACATATAAAGGAAACGGGCAGCTGTCCGGAAGGCacgaaaacataaaaaaacttacaaaattaatttaatttggcCAAAATGTGCAGAAACACTGTTATGGTTCTCAAAGTTGCAAAGATTACAGTAGAGATTAAAATGCTGGATAAAAAGGGGAACTTTTTATTTACATGAAACATGTTGATATGTGCCATATTTATTCCAGTCGGAATCAAAGCTACATAATAGAGGAAAAGGGCATTTATGTATTAAAGTAAATGAGTAAGAGTACAGTAAATGCCATTAAATGTCAGTAACAGCCCTTTAAGACAAGTGGTGTGCTTGGATTATATTGGACAGTTTTAGTTATTTGACTTTGATGAACTTTGTACACACAGCAGTAACTATTATGTATCTTAGCACACTGCTATTCCGATATTTTAACATTTGGTGCTAGAAAACCAAAGAAAGTTTTTAAAATAGTCCAGGTACGGACAACTGTCATTTCATGTTAACGTTTTAcaagtgatttaaaaataaaattcattTGAAAACAATTTTCCACAAACGTATTTTTACAACTGACCTATTAATTATATATCTTGACAGAGTAGTCAGAATGGTGCACAGGGCAAAAGTATATTTCAATAAACCTTGTAAaagtactgtacatatatgTCTTTGGATTCAGTTGTAAACACTGCCTACTTACTTCATTGTGCCTTCTGTTTGAGTTGATCTTTGTTTGTGAAAAATGCTTGAGGTTGACCTACTTTATAACAGAGACAGTTGCACTTGCTTTCCTTAATATTGTCCTGTATGAAATTACTCGGTATCTCTCTGGTCCTGAAAATGTAATGTCCCATACGCTGGTATCCGTTTATACAACTGTTCTTTTATAAAGTTATACACATTGTAGGGCGTACAAAAACCCTGTTGTCAACATTTATTCTGTACATGCAGTATATGAATTTACACACGGGTAAACAATCCGGTTAATAAGTAATATGGGTTGAAACAATATGTGTTCTTTATGTAATATAAAGAAATAAACTACCTGAtaattttga

Function

NR:

description
PREDICTED: gap junction beta-1 protein-like

GO: NA

KEGG:

id description
K07620 GJB1, CX32; gap junction beta-1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814232.1 True 3160 mRNA 0.42 2 16513561 16517032
XM_039814233.1 False 2988 mRNA 0.42 2 16513561 16517477
XM_039814234.1 False 3128 mRNA 0.40 2 16513561 16518060

Neighbor

gene id symbol gene type direction distance location
LOC120567053 LOC103356970,LOC107093447 coding downstream 450 16509358 ~ 16513111 (-)
ergic1 ergic1 coding downstream 99230 16395235 ~ 16414331 (-)
npy7r LOC104967498,LOC104930063,LOC103356978 coding downstream 184050 16324573 ~ 16329511 (-)
prelid1a prelid1 coding downstream 190184 16316611 ~ 16323377 (-)
fam193b fam193b coding downstream 204145 16298820 ~ 16309416 (-)
LOC120567296 NA coding upstream 94 16518154 ~ 16526951 (-)
LOC120567142 LOC104959287 coding upstream 12210 16530270 ~ 16533180 (-)
LOC120567144 LOC104923178 coding upstream 15222 16533282 ~ 16537447 (-)
eda NA coding upstream 19673 16537733 ~ 16549973 (-)
si:dkey-27i16.2 LOC103370713,LOC104948504,LOC103391155,LOC108242049,LOC101171753 coding upstream 420280 16938340 ~ 16942236 (-)
G105417 NA non-coding downstream 7283 16466448 ~ 16506278 (-)
LOC120567052 NA non-coding downstream 16239 16496457 ~ 16497322 (-)
G105337 LOC103356977,LOC104930064,LOC102195804 non-coding downstream 174543 16334273 ~ 16339018 (-)
G105332 NA non-coding downstream 249142 16264201 ~ 16264419 (-)
G105331 NA non-coding downstream 249698 16263231 ~ 16263863 (-)
G105433 NA non-coding upstream 169419 16687479 ~ 16687729 (-)
G105435 NA non-coding upstream 169996 16688056 ~ 16688590 (-)
G105436 NA non-coding upstream 171023 16689083 ~ 16689305 (-)
G105443 NA non-coding upstream 237276 16755336 ~ 16755558 (-)
G105549 NA non-coding upstream 534445 17052505 ~ 17055622 (-)
unc5a unc5a,LOC102788949 other downstream 409767 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 641612 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 894453 15598343 ~ 15619108 (-)
G105086 NA other downstream 1378825 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 1404963 15089404 ~ 15108598 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 6296 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 439583 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 624022 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 648836 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 1004081 17522141 ~ 17577811 (-)

Expression


Co-expression Network