si:ch211-107m4.1


Basic Information

Item Value
gene id si:ch211-107m4.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23357417 ~ 23363363 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814256.1
CAGGGCACCATATTGAACCGATGTTTTGATCCGAACTGCTACCTTTCTCCTTTAGTTTACTATAACCTCTTTGGTTTACTTTGAGTCCGATATTTTGCCACAACTCGATTAAAAAATCACCTGAATTTGCACTCACACGGTAGCAATGAAGCTAACGGACATCAAAAAGCTAAAAGTGGCCGAACTGCGGTCCAGACTTAAAGAACTCGGGTTGGACAACAAGGGACTGAAAGCTGAGCTGTTAGGCAGGCTGTGGTCCGCGTTAGAGGCAAAACAAAGTGCGAAGGACGGTGATGAAGAGATACAACTACAAAATGACCGCTCACACACACCTTCAGCACCGGTGGAGACAGTGGACATAGTGGACATCTGCACTCAGTCCTCATCACCCCCGACAAGAGCTGTAATTTCTGAGCGATATAACGTGAAACCGGACTGCATCCGAGAGTACACAGACACCGCCACGCAGACAGAGACCGATACCGGTCTGCCATCTCTACAACACGGCTCCGAGTGTATTTCCGAGTATGTGCCAGTGCACCAAGCGGAGGAGAGAGAAGTTGAAATGCAGCAGGGAGGTACAGAGGATCCTGGAGAGGACAGGAGAACTCTTTCATCAGAAGAGATGGGCAGAGGAAGAGCTTTCTACGAGTTCAAAGAGGAGATAAGATACAAAAGAGCCAAATCACCACATTCTCCAGTGGAAACGGAGGAGacggaggaggaagatgaagatAAAGTCAGACTAGATCCATATGACAGACACCTCCACTTTGAGGTGGGTCCTGATTGTGCATGTGGCCAGCCGCGGTTCTGGGCTCGATTCCCCTCGCTGTGGTCAGGCTGCAGGCTCACCCACGGGGTGCTGCAGGGCAGAGTGAGCTTTGAGGTGAGGCTGGAGAGGAAGTTGCTGACTACACAGCTGGAGGAACAAGAACACATGGATCCTTATGGCCTGAGAGTCGGCTGGTCTGTGTCCAACACCTCTCTACTGCTGGGTGAAGATGAATTCTCTTTTGCTTATGATGGGCGTGGTAAAAAAGTGTCAGGTGGGAAGGTGGAAGAGTTTGGAGAACCCTTCTCAGAGGGAGATATCATTGGCTGTTATGCTTCTTTCTCCACAGACGGTGCTGTTGAGCTCTCTTTCCATAAGAACGGTCGTTTCATGGGGGACGCCTTTTCCCTGGACGCTTCTATGCTGCTGGGTCGTCCTCTTTTCCCTCACGTCCTCTGTAAGAGCTGTTCAGTCAGATTCCTCCTAGACCCCACAGCTTCTCCCTGGTACCCGGGTCCTCCAGGGTTCATACCGCTGGCAGCTCTTTCTGCTGGGCAGAGGGTGTGCACCACATTGCCTCCTACCTTCAGAGAAAACTGTGAGATGTTGTTGATGGTTGGTCTTCCTGGTTCTGGGAAAAGCCACTGGGCAAGGACTCAAATGAAGCAGCATCCAGAGAAACGGTACAAGCTGCTGGGCACCGAGGAGCTGCTTGCATGTATGATTagtGGTGGACGGAGGGACAGCAGGCTGCAGCAGGCCTCTCAGTGTCTAACTGATTTGATTAAGATGGCTGCTCAGACAGCTGGCAACTATATTCTCGATCAGAGCAACATCCTCTTCTCTGCCCGGCGGTACAAGCTGCAGCTGTTCACAGGCTTCAGGCGGCGGGTGGTGGTGGTCTTTCCCTCAGCAGACGAGTGGAAAAGACGACTGTCTCTGCACCAGACGAGCAACGGGGAGCAGATCCCTGAGACCGCCCTGCTCAAACTCCAAGTGAGCTGCAGTCTTCCAGAGCAGCAGGGCGACctgctggaggagctgcagtaTGTCGAGCTGCCTCAGGAACAGGCACAGGAACTCCTGCAGGAGTATAAAGTTGAGGCCCGCAGACTGCTGCCCCCCATCGCCAAACACGAGAAGAAGAAACCCCGACTTCACAAGAAAAGACCCCACCCTCACGGCCCTCTACCCTCGCATAGGATCCAGTGGACTGGACTTCATGAATGGAATGACACAGGACTCAACATGCAGCCATGGAGGCAGCAGCCAAGATATtgGAGTGAGCCATATCTGGACCAGGGCTACTACTATAGAGATGTTGGTTACAGCGGATATGAAGGGTACTGTTGAAGAAACCTGGAGCAAGAGGAAACGGATGAGTTTGAGATCTGTGTTTACATGGACGATCATTCTACTGATGTTAtttaatagtttaaaaaaaaacaactaactaCATCAGCAAGTTATATTATACAGAGAACTAACGACTACGGTGTATGTTGCACTCTCTGCTTTGACCAATCAAAGACCAGGTCACTTTTTAGTatttttattcaaatatttgaaaaatgtcatgtacaaattatgaaaacatttactgtattttgCACAATTTTACCACCAGTATTGGTCAGAGAGTGCTTAAAGTCAAATAGTAATAAATCCCTGAATTTGAATGAAAA
>XM_039814257.1
CAGGGCACCATATTGAACCGATGTTTTGATCCGAACTGCTACCTTTCTCCTTTAGTTTACTATAACCTCTTTGGTTTACTTTGAGTCCGATATTTTGCCACAACTCGATTAAAAAATCACCTGAATTTGCACTCACACGGTAGCAATGAAGCTAACGGACATCAAAAAGCTAAAAGTGGCCGAACTGCGGTCCAGACTTAAAGAACTCGGGTTGGACAACAAGGGACTGAAAGCTGAGCTGTTAGGCAGGCTGTGGTCCGCGTTAGAGGCAAAACAAAGTGCGAAGGACGGTGATGAAGAGATACAACTACAAAATGACCGCTCACACACACCTTCAGCACCGGTGGAGACAGTGGACATAGTGGACATCTGCACTCAGTCCTCATCACCCCCGACAAGAGCTGTAATTTCTGAGCGATATAACGTGAAACCGGACTGCATCCGAGAGTACACAGACACCGCCACGCAGACAGAGACCGATACCGGTCTGCCATCTCTACAACACGGCTCCGAGTGTATTTCCGAGTATGTGCCAGTGCACCAAGCGGAGGAGAGAGAAGTTGAAATGCAGCAGGGAGGTACAGAGGATCCTGGAGAGGACAGGAGAACTCTTTCATCAGAAGAGATGGGCAGAGGAAGAGCTTTCTACGAGTTCAAAGAGGAGATAAGATACAAAAGAGCCAAATCACCACATTCTCCAGTGGAAACGGAGGAGacggaggaggaagatgaagatAAAGTCAGACTAGATCCATATGACAGACACCTCCACTTTGAGGTGGGTCCTGATTGTGCATGTGGCCAGCCGCGGTTCTGGGCTCGATTCCCCTCGCTGTGGTCAGGCTGCAGGCTCACCCACGGGGTGCTGCAGGGCAGAGTGAGCTTTGAGGTGAGGCTGGAGAGGAAGTTGCTGACTACACAGCTGGAGGAACAAGAACACATGGATCCTTATGGCCTGAGAGTCGGCTGGTCTGTGTCCAACACCTCTCTACTGCTGGGTGAAGATGAATTCTCTTTTGCTTATGATGGGCGTGGTAAAAAAGTGTCAGGTGGGAAGGTGGAAGAGTTTGGAGAACCCTTCTCAGAGGGAGATATCATTGGCTGTTATGCTTCTTTCTCCACAGACGGTGCTGTTGAGCTCTCTTTCCATAAGAACGGTCGTTTCATGGGGGACGCCTTTTCCCTGGACGCTTCTATGCTGCTGGGTCGTCCTCTTTTCCCTCACGTCCTCTGTAAGAGCTGTTCAGTCAGATTCCTCCTAGACCCCACAGCTTCTCCCTGGTACCCGGGTCCTCCAGGGTTCATACCGCTGGCAGCTCTTTCTGCTGGGCAGAGGGTGTGCACCACATTGCCTCCTACCTTCAGAGAAAACTGTGAGATGTTGTTGATGGTTGGTCTTCCTGGTTCTGGGAAAAGCCACTGGGCAAGGACTCAAATGAAGCAGCATCCAGAGAAACGGTACAAGCTGCTGGGCACCGAGGAGCTGCTTGCATGTATGATTagtGGTGGACGGAGGGACAGCAGGCTGCAGCAGGCCTCTCAGTGTCTAACTGATTTGATTAAGATGGCTGCTCAGACAGCTGGCAACTATATTCTCGATCAGAGCAACATCCTCTTCTCTGCCCGGCGGTACAAGCTGCAGCTGTTCACAGGCTTCAGGCGGCGGGTGGTGGTGGTCTTTCCCTCAGCAGACGAGTGGAAAAGACGACTGTCTCTGCACCAGACGAGCAACGGGGAGCAGATCCCTGAGACCGCCCTGCTCAAACTCCAAGtgGAGTGAGCCATATCTGGACCAGGGCTACTACTATAGAGATGTTGGTTACAGCGGATATGAAGGGTACTGTTGAAGAAACCTGGAGCAAGAGGAAACGGATGAGTTTGAGATCTGTGTTTACATGGACGATCATTCTACTGATGTTAtttaatagtttaaaaaaaaacaactaactaCATCAGCAAGTTATATTATACAGAGAACTAACGACTACGGTGTATGTTGCACTCTCTGCTTTGACCAATCAAAGACCAGGTCACTTTTTAGTatttttattcaaatatttgaaaaatgtcatgtacaaattatgaaaacatttactgtattttgCACAATTTTACCACCAGTATTGGTCAGAGAGTGCTTAAAGTCAAATAGTAATAAATCCCTGAATTTGAATGAAAA

Function

NR:

description
heterogeneous nuclear ribonucleoprotein U-like protein 2

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:0046483 heterocycle metabolic process biological_process

KEGG:

id description
ko03410 Base excision repair
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814256.1 True 2460 mRNA 0.49 11 23357417 23363363
XM_039814257.1 False 2179 mRNA 0.49 9 23357417 23363363

Neighbor

gene id symbol gene type direction distance location
dnajc4 dnajc4 coding downstream 5848 23346187 ~ 23351569 (-)
vegfba vegfb coding downstream 13219 23328250 ~ 23344198 (-)
stx5a stx5 coding downstream 34460 23315838 ~ 23322957 (-)
si:dkeyp-115e12.6 LOC105026731 coding downstream 49354 23285319 ~ 23308063 (-)
kcnk4a LOC104959797 coding downstream 74761 23266914 ~ 23282656 (-)
zgc:153018 LOC104960669,LOC103374078,LOC100705753 coding upstream 719 23364082 ~ 23368791 (-)
trnaf-gaa_66 NA coding upstream 10573 23373936 ~ 23374008 (-)
foxo4 foxo4 coding upstream 80189 23443552 ~ 23453056 (-)
cfl1 cfl1 coding upstream 129748 23493111 ~ 23500048 (-)
atl3 atl3 coding upstream 137978 23501341 ~ 23514176 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding downstream 93518 23242037 ~ 23263899 (-)
G107282 NA non-coding downstream 132961 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding downstream 175700 23179692 ~ 23181717 (-)
G107220 NA non-coding downstream 383657 22928854 ~ 22973760 (-)
G107215 NA non-coding downstream 480958 22875496 ~ 22876459 (-)
G107610 NA non-coding upstream 428691 23792054 ~ 23792502 (-)
G107667 NA non-coding upstream 836136 24199499 ~ 24259346 (-)
LOC120566461 NA non-coding upstream 924786 24288149 ~ 24381312 (-)
G107742 NA non-coding upstream 1068638 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding upstream 1084758 24448121 ~ 24450769 (-)
rnaseh2c rnaseh2c other downstream 170359 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 180391 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 222632 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 364188 22990987 ~ 22993229 (-)
G107117 NA other downstream 664586 22691160 ~ 22692831 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 521225 23884588 ~ 23988901 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 1210078 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 1498607 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 1899809 25263172 ~ 25264864 (-)
G107989 NA other upstream 1916240 25279603 ~ 25288086 (-)

Expression


Co-expression Network