gcna


Basic Information

Item Value
gene id gcna
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17001410 ~ 17007394 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814299.1
GAATGCGTTCTTGACAGCTTCCGGTGTAACGTATCACTATATTTGAATTTGCCTTCGCTTACTTCCCGTCTGCTAGCTACATACTTCTGCCTCTTTTATTTGCAACAACAGAAGCGCGTTTGGTAATATCTCAGAGCAGAGGAAACCATGAATGATGATACCCGCAAATTATTTGAAAGAGTTGCTGAAAAGATGGGCTGGGCTGATGAGGGAGGACTGGACACAGCTGAAAAAAAGCTGATGAGTTCAATTGGCAGAACTCGCCATGCTGCCACAAGCAGTCATCGATCTGTGGATCGGTCAGCCACTCCTGTCCAACTTGTCCTCTCTGACAGCGAAGATGATCCAGAGAAGGAGAACCAGTGCTCCAACGGCAACGATTACAGAAACAAGTCTTTGATCGATTCCAGTGATGAAGACTTTGACCAATTTCTTGTGGAAAGGGCTACACCGAAAGCTAAACCTACCTCACTCAAACCATGGAGTTCTGCAAAGAAAAACAGTTCCACCGTTCTTGTAAAGAGCTCGGACGATGACGACGGTTTTGAGACATTTCTGCAACGAGTGAAAACCCCTAATGTCAAGCCTAAGAAAATCTCAGTGAGTGGGAGTGAAGACAGCCTCAAAACCTTCATAGTGGATGACTTCTCATCAGATGATGACTTTATTGAGACAAAAGCATCTTTTAAAGTGCCGAAGAAGAGCAATACTCCCGCAGCCCAGCATCCACTGAGGAGACCACTGGCTCAATGCGACTCCCCAGTCTTTTTTAGtgacagtgatgatgatgaggatgataaTAATATTGTGGTCAAGAGCACTTGGAGGATTCGTCACTCAAAACCTAAGCCCCCGCCAAAGGCTAACAAGAATGCTCTGCGGTGTGACGACGAGGACAGCTCCCCATCACTGCCTTTGCCTCCCATCccttctcctttttctcttcGTCCCCACAAAACTCTAACTTCAGTGGCCTCTCCTAAACCCACCCTTTCAGGACCTTCTAAGCTGGATGAATCGGCCAGTTCTGAGGAGGAGTTCACATCCCTACTGGAgagactgaaaaagaaaaacaagttcacTGGCACTCCATTCTCACTTAAGGGCACCCACGAATGCAATAAGGAGCCCCCTGGGTCAGCTCCTCCTGGGTCAGCTCCTCCTGTAAACAGGCTCCCAAAACAAGTCTCTAAATCATTAAGCGAAACCCCTCTGCATGTGAAGACGCCAGGAAAATCCACCATCTTGAAGCCcacagtcagtcagacagagTCTAGACACGGCCCCACAAGCAGGGTAGCATTGTGTAAGACCCCGGGGTGCTTCTTGCAGTCTTTATCAAACCCTGGCTCCAGCTATAGCTGCAAATTTAAGCAGAACAAGGAAGAACTCACCagtagactttaccagctgTACAATACCAGTGTGTTTGACAGTAAGCTCCCCATCAATATGTCAGTGACTTGGAATAAGAAGATGCGGAAGACAGCCGGTTACTGTGTCACGGGGCAGGAGCGAGGTGGAGGGAGCCGCTACGCTCGCATTGAACTGTCGGAGAAAGTCTGTGATTGTGCAGATCGTCTCAGGGACACACTGATTCATGAGATGTGTCACGCTGCAACCTGGTTGATTAACGGTGTAAGGGACGGCCACGGGAACTTCTGGAAGCTGTACGCTCGCAAGTCCACACTGGCGCATCCTGAGCTGCCCATGGTCACTCGCTGCCACAGCTACGACATCAAGTACAAATTCCAGTACCAATGCACCCGCTGCAAGAACACGATCGGGCGTCATTCCAAGTCACTGGACACGCAAAAGTTTGTGTGTGCCATCTGCACAGGACAGCTCGTCTTACTGACGCCTGCCAAGCCGCGTGCTCCCACTCCTTTTGCCAACTTTGTCAAAGAGAATTTTGGGACTGTACGACAGGAGCTAGCAGGACAAAGCCATGCGGAAGTGATGCGTAAACTTAGTGCAGACTTTGCCTCCAAGACTAAACTAAGTCAAAGCTGAGATGTTGATGCTCGCTGTACTCTCACCCATGGGCTGAGCTGCACAACCACAGGAGACCTGTTGAAATACCTCAGTCAACTAGACTTGTATTAGTAAGCagctgtgtttatttttgtaatatatttttgttaGGCATTATATGTTTTACTTGGATAGCGACAgagaggaaaagggagagaCCTGCAGCGAAGGGCCCTGTGATGGATTCGAACTCGGGGCCGCTGCGGTCATTGTGATCattaatattaaatgtatttttttttgtgttcacgtaatttctgtatttatcTGTATGTGTTTTATAGACTGGATCTGCTGGAACTGAAAAAAACTGAGCCTAAACGTTAAGTTCACATTCCTGAGTGTGTGTAAATGAGGTGGTGTCAAACAATAAAATTCATACCACCTGTTATCCCTGGCATCTAAAGAGTTGGTATCGTACAGTACGGTACATGTATGATTAACTccatatgttttgtttttttatatatctgacTGGTTTTATCTTCCTATGAGCTCTATGAATAAAGTTTAAATGTGTGACTTGACATTAAA
>XM_039814300.1
GCGTTCTTGACAGCTTCCGGTGTAACGTATCACTATATTTGAATTTGCCTTCGCTTACTTCCCGTCTGCTAGCTACATACTTCTGCCTCTTTTATTTGCAACAACAGAAGCGCGTTTGGTAATATCTCAGAGGAAACCATGAATGATGATACCCGCAAATTATTTGAAAGAGTTGCTGAAAAGATGGGCTGGGCTGATGAGGGAGGACTGGACACAGCTGAAAAAAAGCTGATGAGTTCAATTGGCAGAACTCGCCATGCTGCCACAAGCAGTCATCGATCTGTGGATCGGTCAGCCACTCCTGTCCAACTTGTCCTCTCTGACAGCGAAGATGATCCAGAGAAGGAGAACCAGTGCTCCAACGGCAACGATTACAGAAACAAGTCTTTGATCGATTCCAGTGATGAAGACTTTGACCAATTTCTTGTGGAAAGGGCTACACCGAAAGCTAAACCTACCTCACTCAAACCATGGAGTTCTGCAAAGAAAAACAGTTCCACCGTTCTTGTAAAGAGCTCGGACGATGACGACGGTTTTGAGACATTTCTGCAACGAGTGAAAACCCCTAATGTCAAGCCTAAGAAAATCTCAGTGAGTGGGAGTGAAGACAGCCTCAAAACCTTCATAGTGGATGACTTCTCATCAGATGATGACTTTATTGAGACAAAAGCATCTTTTAAAGTGCCGAAGAAGAGCAATACTCCCGCAGCCCAGCATCCACTGAGGAGACCACTGGCTCAATGCGACTCCCCAGTCTTTTTTAGtgacagtgatgatgatgaggatgataaTAATATTGTGGTCAAGAGCACTTGGAGGATTCGTCACTCAAAACCTAAGCCCCCGCCAAAGGCTAACAAGAATGCTCTGCGGTGTGACGACGAGGACAGCTCCCCATCACTGCCTTTGCCTCCCATCccttctcctttttctcttcGTCCCCACAAAACTCTAACTTCAGTGGCCTCTCCTAAACCCACCCTTTCAGGACCTTCTAAGCTGGATGAATCGGCCAGTTCTGAGGAGGAGTTCACATCCCTACTGGAgagactgaaaaagaaaaacaagttcacTGGCACTCCATTCTCACTTAAGGGCACCCACGAATGCAATAAGGAGCCCCCTGGGTCAGCTCCTCCTGGGTCAGCTCCTCCTGTAAACAGGCTCCCAAAACAAGTCTCTAAATCATTAAGCGAAACCCCTCTGCATGTGAAGACGCCAGGAAAATCCACCATCTTGAAGCCcacagtcagtcagacagagTCTAGACACGGCCCCACAAGCAGGGTAGCATTGTGTAAGACCCCGGGGTGCTTCTTGCAGTCTTTATCAAACCCTGGCTCCAGCTATAGCTGCAAATTTAAGCAGAACAAGGAAGAACTCACCagtagactttaccagctgTACAATACCAGTGTGTTTGACAGTAAGCTCCCCATCAATATGTCAGTGACTTGGAATAAGAAGATGCGGAAGACAGCCGGTTACTGTGTCACGGGGCAGGAGCGAGGTGGAGGGAGCCGCTACGCTCGCATTGAACTGTCGGAGAAAGTCTGTGATTGTGCAGATCGTCTCAGGGACACACTGATTCATGAGATGTGTCACGCTGCAACCTGGTTGATTAACGGTGTAAGGGACGGCCACGGGAACTTCTGGAAGCTGTACGCTCGCAAGTCCACACTGGCGCATCCTGAGCTGCCCATGGTCACTCGCTGCCACAGCTACGACATCAAGTACAAATTCCAGTACCAATGCACCCGCTGCAAGAACACGATCGGGCGTCATTCCAAGTCACTGGACACGCAAAAGTTTGTGTGTGCCATCTGCACAGGACAGCTCGTCTTACTGACGCCTGCCAAGCCGCGTGCTCCCACTCCTTTTGCCAACTTTGTCAAAGAGAATTTTGGGACTGTACGACAGGAGCTAGCAGGACAAAGCCATGCGGAAGTGATGCGTAAACTTAGTGCAGACTTTGCCTCCAAGACTAAACTAAGTCAAAGCTGAGATGTTGATGCTCGCTGTACTCTCACCCATGGGCTGAGCTGCACAACCACAGGAGACCTGTTGAAATACCTCAGTCAACTAGACTTGTATTAGTAAGCagctgtgtttatttttgtaatatatttttgttaGGCATTATATGTTTTACTTGGATAGCGACAgagaggaaaagggagagaCCTGCAGCGAAGGGCCCTGTGATGGATTCGAACTCGGGGCCGCTGCGGTCATTGTGATCattaatattaaatgtatttttttttgtgttcacgtaatttctgtatttatcTGTATGTGTTTTATAGACTGGATCTGCTGGAACTGAAAAAAACTGAGCCTAAACGTTAAGTTCACATTCCTGAGTGTGTGTAAATGAGGTGGTGTCAAACAATAAAATTCATACCACCTGTTATCCCTGGCATCTAAAGAGTTGGTATCGTACAGTACGGTACATGTATGATTAACTccatatgttttgtttttttatatatctgacTGGTTTTATCTTCCTATGAGCTCTATGAATAAAGTTTAAATGTGTGACTTGACATTAAA

Function

NR:

description
PREDICTED: acidic repeat-containing protein-like

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis
ko04115 p53 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814299.1 True 2568 mRNA 0.46 13 17001410 17007394
XM_039814300.1 False 2559 mRNA 0.47 13 17001410 17007390

Neighbor

gene id symbol gene type direction distance location
nsdhl nsdhl coding downstream 5861 16989817 ~ 16995549 (-)
znf185 NA coding downstream 12411 16971172 ~ 16988999 (-)
si:dkey-27i16.2 LOC103370713,LOC104948504,LOC103391155,LOC108242049,LOC101171753 coding downstream 59174 16938340 ~ 16942236 (-)
eda NA coding downstream 451437 16537733 ~ 16549973 (-)
LOC120567144 LOC104923178 coding downstream 463963 16533282 ~ 16537447 (-)
ogt.1 ogt coding upstream 734 17008128 ~ 17024727 (-)
kctd12b LOC107396469,LOC101170105,LOC102309695,LOC106928388 coding upstream 91138 17098532 ~ 17113581 (-)
znf711 znf711,zfx coding upstream 111071 17118465 ~ 17125904 (-)
zgc:66447 LOC103370289,LOC101476930 coding upstream 118951 17126345 ~ 17138211 (-)
LOC120566760 NA coding upstream 146744 17154138 ~ 17158517 (-)
G105443 NA non-coding downstream 245852 16755336 ~ 16755558 (-)
G105436 NA non-coding downstream 312105 16689083 ~ 16689305 (-)
G105435 NA non-coding downstream 312820 16688056 ~ 16688590 (-)
G105433 NA non-coding downstream 313681 16687479 ~ 16687729 (-)
LOC120567052 NA non-coding downstream 504088 16496457 ~ 16497322 (-)
G105549 NA non-coding upstream 45111 17052505 ~ 17055622 (-)
G105577 NA non-coding upstream 110357 17117751 ~ 17118264 (-)
G105578 NA non-coding upstream 144777 17152171 ~ 17153593 (-)
G105598 NA non-coding upstream 317066 17324460 ~ 17324955 (-)
G105597 LOC104923197,LOC104943958 non-coding upstream 327010 17334404 ~ 17335952 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other downstream 37874 16957643 ~ 16963536 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other downstream 326555 16524356 ~ 16674855 (-)
unc5a unc5a,LOC102788949 other downstream 897616 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 1129461 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 1382302 15598343 ~ 15619108 (-)
tmsb1 NA other upstream 134688 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 159502 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 514747 17522141 ~ 17577811 (-)
kif3a kif3a other upstream 660690 17668084 ~ 17748547 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other upstream 776166 17783560 ~ 17795391 (-)

Expression


Co-expression Network