zgc:153018 (LOC104960669,LOC103374078,LOC100705753)


Basic Information

Item Value
gene id zgc:153018
gene name LOC104960669,LOC103374078,LOC100705753
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23364082 ~ 23368791 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814301.1
GTGAGGGGCGTTGTGATGTGTGTCGGATGGAATGCGCAGCCATGACTTGGTCCCCGCCCTGATTTCTTTAatacccaccaccaccacagtgAATATACGGGGATGTGCTGACATTAATCGGTATTGGTTTTAACAACGTATAACATTAGTTCTTGTTTAACTTGTAACATGGAGCTGGACCGGCGGCTGTTGCTGGCCCACTGTACGGCTCACGCCCTGTCGATCGTAGCGGGCTTGCTGGTTGTCGTCCCCATGGCTCTCAACGGCTCCGCTTTCAAAGGCCGCTGTGCACTCTTTTCCATCGGCTACTGGAGGACAGAGGACCGGGAAGAGCCCACGGGACAGCCGGAAGACCTCGCTCACCTGGTGGTACAGCAGTGGGGCCCACCGGCTGCTTGTCAATTCGCCACATTTGTCGGTATTTTCACGGTGCTGTACGGTGCAGCGCAGGGTTGGAGGTGCCTCTTCTATCTGCACGGACGACATGATGAcACCCTGTTTTCGTCCTTCCTGACGGTGCTgctgagcgtgtgtgtgctcTTCCTGTCTGGAGGGGCCAGTGTTATTTTGTCTCTGGGACTCGTCTCCTGGTGTGACACAGTGACTGATCACAACACACGGCCAAACAGCTGTTCAGAGTCCCAGTCTGTTCCACTTTATCTGGATGTGGACACCTCCTCTTTCTACAATGAGCTCAGTCTGGCACAGGCGTCTCTCTGGGGAGTGACGGCTCTGTGGCTGGCTCAGTCCATCCTGGCTTTCCTGCGGCTCTACCACTCTCACAGCCAGCACATCAGCAGGCCGTGTGGCCCCCGAGAGAAGGAGCTGCTGCTAGGACACAGTCCATCTGAGAACGGCTCCCCAACACCTCCACATCCTCCAACAACACCCACCATCATTGTCTAACTGAGAGTGTGAGGTAGTGATACAAGATGATACAATTAACTCTGCTGTATAAATTGTGTTTTAAACCTCATTTTTTCCCATATCACTATTAATAATACCCACAAGGTTCTTACAGTTACAGTTCTTACTACTGCATGTAGAATATGGGCATgaaagtttttattttgatataatTCATAATTCATCTTCTTATAAAAGAAGAGCCTGACCGATAAATGGTATAAGCGTATATGTCAGTCGATAAGAAATTTCAATATAGAAATGCCAAAGATTTGTTTCAGGTCATTTAGAAAGTGTCCATTAGGCCTGCATAGTTTGTCTTCCAGAGAGCACTGACTCGTTTATTTTCACCATCCAGTAAGTGGTCAGGCTAATGATATGATATTTGAGCAGGGCCAACAAGCACCACAACTTAGCCATAGTTTGTGCCTcttgtatttattcaatttgagTCACAGAACTAAGCATCTATTTCTTTGAATGATCAATACCTGTTGAtcttcattatttttttctccaaatcctTACATTTTCAGTTCCCTGCATGATAAAACACAGTTCCCCCATCTAGATAGTCGGAAAGTATGCTGCGTTCacgtcatttaatttaagagaatttgtttattttaagtgCCCATGTAATGGTGATACATGAGAGCCACTAACAGTGATTAACTTCAACTCTGTCTAGGGACAAAGGGGATTTTACAGAATTAAAAAACACTCATTAGAATAGTTGAAGCAGATGTATTCAGTGATCTAATAACTATCTAATAACCAGTGTTATCTTTAAGCTAATAATTATCCTTGTCATTAGACCGTGACTTGGTGAATCAATGTATTACAGTTTATTTACGTCACTGATGTCGCCAAAAGCAACCAGTTGGTGTTGTCTGTtttgaatatatttaatatgcatggttgtttacatttctgcTGGAGTCTGACATTTTGCACAGTTGTGTCCTCATCAGGGAGAATACACTTTTTTGAGTGTTCTAAGAGTAATATTCAGATGTAGCACTGAGgcgcttttattgtgaagcatgTGGTGAGAGAGTGTGACTGAGCCACCAAGTACAAGGCTCACTGTGTGAGCATGACCCGAATGTTCTGTTGTGTAACGGAAAAATCTCTGCTGACCTTCTCTCTTCTTGTGACGATATTTATCATGATGCTATTTGTGTGGACGCAGCCGCTCTCTGGGCATTAATGAAGCAGTCAAATCTTCTCAAATGATACTTATAGAGTGTAAACCTTCAAGCACCTGTGATATTTTTCATATTGAGAGAGATTTGTGCAGAGCCCAGAAGGGTCAGTGAAGAGGCAAGAAGTTACTAACTTTGCTGAGTTCCTAAAACAAATGATTTAAAGTTGTTTCTAAACTTTTCTCCTGTTATCATCGACCCAAGTGGTTGTAATGACACACAGACAGCGGAGCACGAAATCTGAAGTAAAGAGAGATGAGACAGTATTAGTAATGTCTTGTAATAAGGGCTGTCCTcaattaaagaaattcttagtcgacttaCACTCATAccattttgtcgactaatcaattagttgatttaatctaCAGATCTGTAAAACGGAGTTTCTCTGtcaaagaatcatgcaaaagcagTACTTTAaatgtttaccagagatgtgctcgtaagtttctttaaaaagtcattcaccatgaaaaaaaagcataaaacatgactaatcgactaaagaaatcatCGTGGACTAAGACCAACACGaccgattagttgactaatggATGAAGAGGGGCAGCCCTACTtgtaatatataaaatgttttttgtattgcTTTTTACCTCTTATACCTGTTTGTGCTAATCCACaatcatgtttgttttgtcttgtttgtTGAATAAAAAGCTTCCCATTATGAAAGAA

Function

NR:

description
PREDICTED: transmembrane protein 179-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814301.1 True 2810 mRNA 0.42 4 23364082 23368791

Neighbor

gene id symbol gene type direction distance location
si:ch211-107m4.1 NA coding downstream 719 23357417 ~ 23363363 (-)
dnajc4 dnajc4 coding downstream 12513 23346187 ~ 23351569 (-)
vegfba vegfb coding downstream 19884 23328250 ~ 23344198 (-)
stx5a stx5 coding downstream 41125 23315838 ~ 23322957 (-)
si:dkeyp-115e12.6 LOC105026731 coding downstream 56019 23285319 ~ 23308063 (-)
trnaf-gaa_66 NA coding upstream 5145 23373936 ~ 23374008 (-)
foxo4 foxo4 coding upstream 74761 23443552 ~ 23453056 (-)
cfl1 cfl1 coding upstream 124320 23493111 ~ 23500048 (-)
atl3 atl3 coding upstream 132550 23501341 ~ 23514176 (-)
si:ch211-145o7.3 LOC104968223,LOC103390737 coding upstream 145824 23514615 ~ 23520010 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding downstream 100183 23242037 ~ 23263899 (-)
G107282 NA non-coding downstream 139626 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding downstream 182365 23179692 ~ 23181717 (-)
G107220 NA non-coding downstream 390322 22928854 ~ 22973760 (-)
G107215 NA non-coding downstream 487623 22875496 ~ 22876459 (-)
G107610 NA non-coding upstream 423263 23792054 ~ 23792502 (-)
G107667 NA non-coding upstream 830708 24199499 ~ 24259346 (-)
LOC120566461 NA non-coding upstream 919358 24288149 ~ 24381312 (-)
G107742 NA non-coding upstream 1063210 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding upstream 1079330 24448121 ~ 24450769 (-)
rnaseh2c rnaseh2c other downstream 177024 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 187056 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 229297 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 370853 22990987 ~ 22993229 (-)
G107117 NA other downstream 671251 22691160 ~ 22692831 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 515797 23884588 ~ 23988901 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 1204650 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 1493179 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 1894381 25263172 ~ 25264864 (-)
G107989 NA other upstream 1910812 25279603 ~ 25288086 (-)

Expression


Co-expression Network