atp1b4 (atp1b4)


Basic Information

Item Value
gene id atp1b4
gene name atp1b4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 25233186 ~ 25238614 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814350.1
TCTCTGTCCAGCGTTCATTCACTATGATGCGCGCCTAGTTGCAAGAGGTTCTCCACACCCGGTCCCTTTTGCACGCCtaaaactttttaatgaaatcccCAAATACTTTTTGactaagattattttttttcctctgggGTACAAGAGGGCTTTCGACATATTAAGACGCGTTTCTATTGCAAAGAAAACTTCAGAATATGGAGCCCAGTTCCACAGAGGGAGGAGCTGAAGAGACGCTCCTTAAAAATCATCCACCAAGTCTTCCTCACAAAGTGATACTGAAACATGGCCAAGAGTTGGAGGAAGAGCAAGAGGAGTTGGCAGAGCACCAGCCTCTAGAGCAGGAAGACCTGAACTTTGAGAGATGGAAGCGCAGGCCGTTACCCGAGAGGACGCTCCACCAGAAAATAGTTGACATTAAGACATACCTGTGGAATGCAGAGACCAAGGAATTCATGGGTCGCTCTGGGAAGAGCTGGAGCCTCATCCTTCTCTTCTACACTGCACTTTATGTGTTTCTCGCAGCCATGTTTGGCGGCTGTATGTTTTGCCTCATGTGGTCTATTAGTCCCTACCATCCAACCTTCAATGATAGAGTGATGCCACCAGGTATGACGATGTCTCCACACCTAGAAGGCCATGAGATCGCCTTCAACGCCTCTGATCGCAAATCCTGGAAGAAGTACGCAAAGTCTATGGATGAATATCTAAGACCGTATAACGATGGTGCGCAGGAGAAGAAGAATATTCGCTGCGCACAGGACAGATACTTCATGCAGGACGACTTGGAGGAGAGCACAGAGCGGAAAGCGTGTCAGTTTAAGAGGTCCTGGTTGGGGGACTGTTCGGGGCTGCAGGACCCCCACTATGGCTATTCTCAGGGAAGGCCATGCGTACTCCTTCGAATGAACCGGATTCTTGGTTACTTACCTGGCCAGGGCAAACCGATAAATGTGACTTGTGGAGTAAAGAAAGGACCTCCAGAAGCCTTAGGAGAAATCCAATTCTTTCCTAAAAGCATTTTTGACCTGAAGTACTATCCATACTATGGGAAGCTCAGACATGTAAACTACTCTGCACCGGTGGTGGCTGTGCGTTTTGCAGGAGTGCAGTACGACACTCACATCCAAGTACAATGCAAACTGAATGGAAAGGGCATCATTAATGATTCACCCACTGACCGCTACCTGGGCAGTGTGACCTTCTCCTTGGATGTCGGAGCGTAAGGCGTAAGATATCGCTGCCAGCAGGATGCTCCCGTGACAATGAGGCAGGAAAATGTACAAGAAAAAAATTCTTTTGAACCAttattttccattttatatGTATTTTCCCTCTCGTCATCTTTCACTCAAATATCCATGTCTTCTGCTGTGAAACAAATTCCCCAAGAAGTAGATAGTTACTCTTGTGTTTCCGTTGTATCTTTGTACCTTGAGCGTGCTACTGGCACCTGCACCCAAAACAAACAGTGCTGAGCACAGGACAAGTGCATAGAGTGAGTTTCAATTCCTGATATTTTGTAATGATTAGCAAGATTAATCAAACTAAATTACACTCTGCCCAATAGTTAGCATTTCTGGCTATGCAAATCCAATTATGACTTAAAACTTTACTAGGCGATTAGCAATATTGTTGTATCAGGTTAGATTAAAGTTTTGTGTGCACAGTTTTGTGTGACAACATGTACTAATTTgttttgaattatatttttcaaCATGTATATTGTAAGAATGCAAAAAACTATCATGAAAACACTGAAAGCAGGACTTGTACTGTACTTACacagtaaaaaaatacataataaatgaTAATGAATGCAAATACACTATTactatatttttgttgaatAGAGCAGTATTATACATTTATGATAAAGCATCACAAGCCACTTCTTGCCTTCTTTTGTAAAAACATTTgcttttgaaattgaaatactaCACAAGACTGATCAATAAagatacatactgtactgtgaaA

Function

symbol description
atp1b4 Predicted to be involved in regulation of transcription, DNA-templated. Predicted to act upstream of or within potassium ion transport and sodium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of sodium:potassium-exchanging ATPase complex. Predicted to be active in nuclear inner membrane. Orthologous to human ATP1B4 (ATPase Na+/K+ transporting family member beta 4).

NR:

description
PREDICTED: protein ATP1B4

GO:

id name namespace
GO:0006813 potassium ion transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0005890 sodium cellular_component

KEGG:

id description
K01540 ATP1B, CD298; sodium/potassium-transporting ATPase subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814350.1 True 1980 mRNA 0.42 9 25233186 25238614

Neighbor

gene id symbol gene type direction distance location
mcts1 mcts1 coding downstream 32671 25198318 ~ 25200515 (-)
urp1 NA coding downstream 43737 25186589 ~ 25189449 (-)
si:ch73-335m24.2 LOC100690735,LOC102798665 coding downstream 60346 25167221 ~ 25172840 (-)
ocrl ocrl coding downstream 67431 25147946 ~ 25165755 (-)
vimr2 NA coding downstream 85328 25130146 ~ 25147858 (-)
zbtb33 zbtb33 coding upstream 14151 25252765 ~ 25257632 (-)
sowahd NA coding upstream 44187 25282801 ~ 25284565 (-)
pttg1 NA coding upstream 46091 25284705 ~ 25290134 (-)
ube2a ube2a,Ube2a,ube2al,LOC103150206 coding upstream 77684 25316298 ~ 25320522 (-)
tnmd tnmd coding upstream 127556 25366170 ~ 25432527 (-)
G107923 NA non-coding downstream 46708 25180938 ~ 25186478 (-)
G107907 NA non-coding downstream 159354 25073181 ~ 25073832 (-)
G107903 NA non-coding downstream 252389 24977124 ~ 24980797 (-)
G107890 NA non-coding downstream 342470 24890301 ~ 24890716 (-)
G107889 NA non-coding downstream 347759 24885009 ~ 24885427 (-)
G107992 sept6 non-coding upstream 53003 25291617 ~ 25297266 (-)
G108031 NA non-coding upstream 409920 25648534 ~ 25648780 (-)
G108036 NA non-coding upstream 441478 25680092 ~ 25680437 (-)
G108040 NA non-coding upstream 535968 25774582 ~ 25774823 (-)
G108082 NA non-coding upstream 1213196 26451810 ~ 26452058 (-)
trnav-uac_15 NA other downstream 371002 24861970 ~ 24862184 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other downstream 654087 24573441 ~ 24579099 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 1244285 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 2046128 23184192 ~ 23187058 (-)
G107284 LOC103374305,LOC102779018 other downstream 2098401 23129709 ~ 23134785 (-)
ndufa1 NA other upstream 24558 25263172 ~ 25264864 (-)
G107989 NA other upstream 40989 25279603 ~ 25288086 (-)
diaph2 NA other upstream 598716 25837330 ~ 26258199 (-)
rpl36a LOC106604455,LOC100304549,LOC100219516 other upstream 1219381 26457995 ~ 26460732 (-)
G108181 LOC103390578 other upstream 1750650 26989264 ~ 27001011 (-)

Expression


Co-expression Network