LOC120567397


Basic Information

Item Value
gene id LOC120567397
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19376204 ~ 19384972 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814357.1
aaaaaaagttcgcCCATTCTAGTTTTCTGTCCGGTGTCGACAGTAAAGAAGTAAACCCCCAACACACAAACTCGACTGTAACAAAGAAGGACATTGCTTTGAAgacaTGTTGCTATTATTCGTGACTACTGTTTCGTGCGTCGTGTTTGGTGGTTCATCCGCtggtttttttgaaaaaagtgagtgCTATGGCAAATTTTTGAGATTCCCATTTACTTATACACCACCTCGTTTCAATGGACAGTTGTACTTCACTCCGAAGAATGGTGGATCCAGGAAACTAGTGATGGATAAGGACGAGGCAAAGGACTCACGCCTCCAAATTTCCATTGGCTCAGTTGTACTCACAGATTTGACAGAAAGAGATGAGGGAACGTTTTCTGTCTCAATTAATGATGCTATGCCATACGATATTATCAAACTGGAAATTTTGGATTGTGCTTACCACGAGTATAGGACTTACGGGAGCCCATATTCCTCTGTTGTTCCTACACAGACTGAATACATAGAATTCCTTCCCTTTTACAGTGAGGAACTGCCGAGGGTCCTGTGGAATCGAACCGACCCTCAGGCCAATAAGGGAAGCAGATTGCAGATGAAGGATTCTATCTGGGAGATTAAGAGCCTCAATCAGGCAGATGGCGGCTACTAcaacttcagaaaaaaagacaaaacagtgCTGTCTAGGTTACGGATTGTAGTAGGAGTGAACGACAGACGCTATTATACAAAGGTGAATGAGCGGTTCGTCATCGAAAATCCTTCGCTCGATGCCACATGGACTGTGACTTTTACACCGGCAGGGGAAGTGGAAAAGAACACATTGATGGAAGCAGGCAATTTGGTCACAGACGATAGGAGGATTCGGATCATGCGTAATGGCATAGAGATTGATCCTGTAAATATCATAGACTCTGGCACCTTTGAGTTCAGAGATCAGCAAGGCTACCTGGCCAAGATTGTGGAACTGAGGGTAGAAGATGAACTTCTTCCTTCCGTCCTTCATCCATATGCTTATATTGCGATCATTGGCGGGATTATCTTTGCGGTGGTTGTCTGCTGTTGCTGTGTGAAAAAGTGCTGTTGTAAAAACAGCTCTTCCAAAAGGCACGAGTCTGCTCCTGAGACTGAAGCAGCACCTGCTGTGTATTACCATGATTTGATTCAACCTGCGGGCCCAAGTTACTCTGTTGCACCTGTGCCAGATAACTCTTATCAGCCAATGAATTCCCTTGTTTCTGGAGAACATACCACTACCTCCCTTGAGCCATCGGTTGAACCTCTAGGAGGGCAAGGAGGCGATCCAGCTCCTACACTCGGCTTTGATTGTCTCTCCTCAGACCCTGTGCCAAAGTTTGAGCTCAAAGGACTGTCCATTCCCTCTGCACTCCCCCTCGTTTCAGACTCAACTTTCTGTGATGTTTACACCTCAGATAAACTCAACTTTCTGTAAATTCAAGTGATGCAGAGTAGAATTTGGGAATACAGCCATTTCAGTGTTTCATTGCGTGAAAAAATTAAGTTCCTGCAAACTTAAAGGCGTGGTAATAGGTGTAGAGAAAAAGGACCATGTATTCCTGTTTAATATGGAATATAAATGTGTTTCATAAACTCAGGTTATAATTAAAGGGCATAACTTACACTTTATGCTGCTGCCAAAGATATCAAAGAAAGGGGAGACAATGTTACAGTGAGGACTGGAAGTGAGTCTGGGTAGCAGATTTTACAAATTGAGGACTTCAAACTGACTTCAACTAgtctagaaatctagacacaccctaatggcagcaaatgtaatttgcagccaggaccaacatcttgatgtgggtctggcttctcagGCTTCTCAGGCTAGACTTCAACACTCATGGAGATCAAAATGCGGCACTCAGCAATTTACTTATATATTCTTTTTCATATGGTTGTTTCAAACCCTTATGCCTTCAGCCTCATATATAGCAACTTGTTGTGTGGCTTTTATCATTACATTCTAGAAATGATAtatgatattttttttgtctttatgctttgtattaatttcaAGTATTACACAAGGAAATGTCATGTTTTGAAGAGCTTTTTCCATCCTTCTTGCAGCTTTGATAAACTACCTTGATCATTATGCCATGTAATCAAATTGTAATATTTGATACAAATAAAAGATATGTAACTATACTTACTTTTACGTTTTTATGCCTCCGCGCCGACGACAGCAATGGCCTGAGGcaacttcactgtgacatcTAAATGATCTGCAAAAAAACGTTTCTGGTATTTATTCAACGCCATAACTCAGGAGGGGAGACTGTGACCAAATTATACATTTGGTCCGATTCCGGGGTGGTGACACTAATCTCAGGTGCCCACCTTGAACCTAACTTCATGTTGGTGGTTTAAGGTATTGAAAACCTTTTTTCACAATCTTTTTCTTAGCAATGGGGAGTGAACGTGAATATACTATTTACTTCTAAAGTTggtacttttttgttgtttgccaAGAAAGATGTGTTTTTCCTGTTGTTTTGATCTTCTGACTTCTTCATTTGAATTGTAAGGGCTAACTGTTGAATAAAGATCATGTCACATTA
>XM_039814358.1
aaaaaaagttcgcCCATTCTAGTTTTCTGTCCGGTGTCGACAGTAAAGAAGTAAACCCCCAACACACAAACTCGACTGTAACAAAGAAGGACATTGCTTTGAAgacaTGTTGCTATTATTCGTGACTACTGTTTCGTGCGTCGTGTTTGGTGGTTCATCCGCtggtttttttgaaaaaagtgagtgCTATGGCAAATTTTTGAGATTCCCATTTACTTATACACCACCTCGTTTCAATGGACAGTTGTACTTCACTCCGAAGAATGGTGGATCCAGGAAACTAGTGATGGATAAGGACGAGGCAAAGGACTCACGCCTCCAAATTTCCATTGGCTCAGTTGTACTCACAGATTTGACAGAAAGAGATGAGGGAACGTTTTCTGTCTCAATTAATGATGCTATGCCATACGATATTATCAAACTGGAAATTTTGGATTGTGCTTACCACGAGTATAGGACTTACGGGAGCCCATATTCCTCTGTTGTTCCTACACAGACTGAATACATAGAATTCCTTCCCTTTTACAGTGAGGAACTGCCGAGGGTCCTGTGGAATCGAACCGACCCTCAGGCCAATAAGGGAAGCAGATTGCAGATGAAGGATTCTATCTGGGAGATTAAGAGCCTCAATCAGGCAGATGGCGGCTACTAcaacttcagaaaaaaagacaaaacagtgCTGTCTAGGTTACGGATTGTAGTAGGAGTGAACGACAGACGCTATTATACAAAGGTGAATGAGCGGTTCGTCATCGAAAATCCTTCGCTCGATGCCACATGGACTGTGACTTTTACACCGGCAGGGGAAGTGGAAAAGAACACATTGATGGAAGCAGGCAATTTGGTCACAGACGATAGGAGGATTCGGATCATGCGTAATGGCATAGAGATTGATCCTGTAAATATCATAGACTCTGGCACCTTTGAGTTCAGAGATCAGCAAGGCTACCTGGCCAAGATTGTGGAACTGAGGGTAGAAGATGAACTTCTTCCTTCCGTCCTTCATCCATATGCTTATATTGCGATCATTGGCGGGATTATCTTTGCGGTGGTTGTCTGCTGTTGCTGTGTGAAAAAGTGCTGTTGTAAAAACAGCTCTTCCAAAAGGCACGAGTCTGCTCCTGAGACTGAAGCAGCACCTGCTGTGTATTACCATGATTTGATTCAACCTGCGGGCCCAAGTTACTCTGTTGCACCTGTGCCAGATAACTCTTATCAGCCAATGAATTCCCTTGTTTCTGGAGAACATACCACTACCTCCCTTGAGCCATCGGTTTATGTACAGTAACTTAGATGGCAGTTGGCATGGCCCCATATTTGGAGAAGCAGACGGggagctaagcaatgtactgctatGGACGCCATGTTAGGTTGGATCCGAAGGTCACACATAACCagacgtgtataaagta
>XM_039814359.1
aaaaaaagttcgcCCATTCTAGTTTTCTGTCCGGTGTCGACAGTAAAGAAGTAAACCCCCAACACACAAACTCGACTGTAACAAAGAAGGACATTGCTTTGAAgacaTGTTGCTATTATTCGTGACTACTGTTTCGTGCGTCGTGTTTGGTGTTGTACTTCACTCCGAAGAATGGTGGATCCAGGAAACTAGTGATGGATAAGGACGAGGCAAAGGACTCACGCCTCCAAATTTCCATTGGCTCAGTTGTACTCACAGATTTGACAGAAAGAGATGAGGGAACGTTTTCTGTCTCAATTAATGATGCTATGCCATACGATATTATCAAACTGGAAATTTTGGATTGTGCTTACCACGAGTATAGGACTTACGGGAGCCCATATTCCTCTGTTGTTCCTACACAGACTGAATACATAGAATTCCTTCCCTTTTACAGTGAGGAACTGCCGAGGGTCCTGTGGAATCGAACCGACCCTCAGGCCAATAAGGGAAGCAGATTGCAGATGAAGGATTCTATCTGGGAGATTAAGAGCCTCAATCAGGCAGATGGCGGCTACTAcaacttcagaaaaaaagacaaaacagtgCTGTCTAGGTTACGGATTGTAGTAGGAGTGAACGACAGACGCTATTATACAAAGGTGAATGAGCGGTTCGTCATCGAAAATCCTTCGCTCGATGCCACATGGACTGTGACTTTTACACCGGCAGGGGAAGTGGAAAAGAACACATTGATGGAAGCAGGCAATTTGGTCACAGACGATAGGAGGATTCGGATCATGCGTAATGGCATAGAGATTGATCCTGTAAATATCATAGACTCTGGCACCTTTGAGTTCAGAGATCAGCAAGGCTACCTGGCCAAGATTGTGGAACTGAGGGTAGAAGATGAACTTCTTCCTTCCGTCCTTCATCCATATGCTTATATTGCGATCATTGGCGGGATTATCTTTGCGGTGGTTGTCTGCTGTTGCTGTGTGAAAAAGTGCTGTTGTAAAAACAGCTCTTCCAAAAGGCACGAGTCTGCTCCTGAGACTGAAGCAGCACCTGCTGTGTATTACCATGATTTGATTCAACCTGCGGGCCCAAGTTACTCTGTTGCACCTGTGCCAGATAACTCTTATCAGCCAATGAATTCCCTTGTTTCTGGAGAACATACCACTACCTCCCTTGAGCCATCGGTTGAACCTCTAGGAGGGCAAGGAGGCGATCCAGCTCCTACACTCGGCTTTGATTGTCTCTCCTCAGACCCTGTGCCAAAGTTTGAGCTCAAAGGACTGTCCATTCCCTCTGCACTCCCCCTCGTTTCAGACTCAACTTTCTGTGATGTTTACACCTCAGATAAACTCAACTTTCTGTAAATTCAAGTGATGCAGAGTAGAATTTGGGAATACAGCCATTTCAGTGTTTCATTGCGTGAAAAAATTAAGTTCCTGCAAACTTAAAGGCGTGGTAATAGGTGTAGAGAAAAAGGACCATGTATTCCTGTTTAATATGGAATATAAATGTGTTTCATAAACTCAGGTTATAATTAAAGGGCATAACTTACACTTTATGCTGCTGCCAAAGATATCAAAGAAAGGGGAGACAATGTTACAGTGAGGACTGGAAGTGAGTCTGGGTAGCAGATTTTACAAATTGAGGACTTCAAACTGACTTCAACTAgtctagaaatctagacacaccctaatggcagcaaatgtaatttgcagccaggaccaacatcttgatgtgggtctggcttctcagGCTTCTCAGGCTAGACTTCAACACTCATGGAGATCAAAATGCGGCACTCAGCAATTTACTTATATATTCTTTTTCATATGGTTGTTTCAAACCCTTATGCCTTCAGCCTCATATATAGCAACTTGTTGTGTGGCTTTTATCATTACATTCTAGAAATGATAtatgatattttttttgtctttatgctttgtattaatttcaAGTATTACACAAGGAAATGTCATGTTTTGAAGAGCTTTTTCCATCCTTCTTGCAGCTTTGATAAACTACCTTGATCATTATGCCATGTAATCAAATTGTAATATTTGATACAAATAAAAGATATGTAACTATACTTACTTTTACGTTTTTATGCCTCCGCGCCGACGACAGCAATGGCCTGAGGcaacttcactgtgacatcTAAATGATCTGCAAAAAAACGTTTCTGGTATTTATTCAACGCCATAACTCAGGAGGGGAGACTGTGACCAAATTATACATTTGGTCCGATTCCGGGGTGGTGACACTAATCTCAGGTGCCCACCTTGAACCTAACTTCATGTTGGTGGTTTAAGGTATTGAAAACCTTTTTTCACAATCTTTTTCTTAGCAATGGGGAGTGAACGTGAATATACTATTTACTTCTAAAGTTggtacttttttgttgtttgccaAGAAAGATGTGTTTTTCCTGTTGTTTTGATCTTCTGACTTCTTCATTTGAATTGTAAGGGCTAACTGTTGAATAAAGATCATGTCACATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814357.1 True 2588 mRNA 0.41 9 19376204 19384972
XM_039814358.1 False 1412 mRNA 0.45 9 19380792 19384972
XM_039814359.1 False 2496 mRNA 0.41 9 19376204 19384972

Neighbor

gene id symbol gene type direction distance location
LOC120567398 NA coding downstream 2221 19365820 ~ 19373983 (-)
aldob aldob coding downstream 41506 19331706 ~ 19334698 (-)
arsia arsi,LOC104927051 coding downstream 71139 19301805 ~ 19305065 (-)
LOC120566716 LOC102215832 coding downstream 93530 19277131 ~ 19282674 (-)
pdgfrb pdgfrb coding downstream 173103 19176247 ~ 19203101 (-)
si:ch211-203d1.3 ssh3 coding upstream 29696 19414668 ~ 19426862 (-)
LOC120566441 LOC100707887 coding upstream 47344 19432316 ~ 19435195 (-)
slc25a51b slc25a51 coding upstream 79499 19464471 ~ 19469408 (-)
LOC120566455 LOC100699740 coding upstream 143450 19528422 ~ 19569097 (-)
dele1 kiaa0141 coding upstream 184563 19569535 ~ 19577846 (-)
G106248 NA non-coding downstream 54898 19320263 ~ 19321306 (-)
G106243 NA non-coding downstream 61788 19312809 ~ 19314416 (-)
LOC120566721 LOC102291516,LOC101487913,LOC102195901 non-coding downstream 87735 19287076 ~ 19288469 (-)
LOC120566720 NA non-coding downstream 110728 19262913 ~ 19265476 (-)
LOC120566722 NA non-coding downstream 113332 19262030 ~ 19262872 (-)
G106276 NA non-coding upstream 9838 19394810 ~ 19395994 (-)
G106303 NA non-coding upstream 92196 19477168 ~ 19557572 (-)
G106349 NA non-coding upstream 472124 19857096 ~ 19857367 (-)
G106378 LOC108242387 non-coding upstream 560683 19945655 ~ 20052690 (-)
G106367 NA non-coding upstream 576982 19961954 ~ 20007579 (-)
LOC120566717 LOC102215832 other downstream 125768 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 331253 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 684794 18687788 ~ 18691410 (-)
reep2 reep2,LOC102782871 other downstream 1061789 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 1307712 18067425 ~ 18068492 (-)
tomm5 NA other upstream 50867 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 92958 19477930 ~ 19482625 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 586861 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 845936 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 1690785 21075757 ~ 21110067 (-)

Expression


Co-expression Network